Array 1 1586565-1585541 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JNIO01000008.1 Selenomonas ruminantium AB3002 P159DRAFT_scf7180000000016_quiver.8_C, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
   1586564	    28	 100.0	    32	............................	TAACGTAGAGACGAGGAAAATCAGCAGCGAAG 	
   1586504	    28	 100.0	    32	............................	TGTTGCCACCGAAGCCGTCGCCGTTGTTGTTA 	
   1586444	    28	 100.0	    32	............................	TTCTTGATGATATAGTCACCACCGAAAGCAGG 	
   1586384	    28	 100.0	    32	............................	TATTCCAGTGGTTAAAGATAGGCAGGGCAAGC 	
   1586324	    28	 100.0	    31	............................	CTTACAACGCCAGCGGGAACGTCGCCAGCAC  	
   1586265	    28	  92.9	    32	CG..........................	TCCTTCAGCCACGTGTGGAACGCATCCCAAAC 	
   1586205	    28	 100.0	    32	............................	TTGAGGACTTCGGCGTAGTCAATGTCCTGACC 	
   1586145	    28	 100.0	    32	............................	AGGCAACAGAGGATTTTCTTGCGCAGATGGAG 	
   1586085	    28	 100.0	    32	............................	AGTACAGGGACTTCGAGGTGGAGCTGTTCCGT 	
   1586025	    28	 100.0	    32	............................	CTCCTGCTTGCGAACACGCTTCAGCGTTCCTT 	
   1585965	    28	 100.0	    32	............................	TATGACCTGCTGTCAGTCCGGGTGTACAAAGG 	
   1585905	    28	 100.0	     7	............................	AAACGAT                          	Deletion [1585871]
   1585870	    28	  92.9	    32	..G.C.......................	TACGTTGTCGGGGGCATCCGTGGAGAATTATT 	
   1585810	    28	 100.0	    33	............................	CTTGACCAGGCAAAGGCTTTGAAGGTGGCTCCT	
   1585749	    28	 100.0	    32	............................	ATGCTGGAGCAGATGTATGAACAGGCGGAAGG 	
   1585689	    28	 100.0	    33	............................	TTGGGCCAGACAATGATGCCACCCACGGGTGTT	
   1585628	    28	  96.4	    32	........................A...	TCTAGCGGGTTCCCCATCAAGCGAAAGGAGGC 	
   1585568	    28	  85.7	     0	.................T...G...G.G	|                                	
==========	======	======	======	============================	=================================	==================
        18	    28	  98.2	    31	GTTAACCGCCGTGTAGGCGGCTTAGAAA	                                 	       

# Left flank :   GACAAAAGAAGAACTGCTAGCGCTGAACATGCAGCAGCAGGTGGCCAGGTATCGCGATTATGTCCATGTAAAGGGAATTGCCAAGGTGCCTGAGCATGTTACATGGGCTACTTTCAAGCGCCGCCATAGTAAGGGGAATCCTGCTAAACTAGCAAGAAGATATGCCACGAGGCATAATATCTCTTTTGAGGAGGCTATCAAGATTTTCCCGGAGCAGGTGCATAGGAAACTCCCTTATGTAGTGCTGCGCAGTGATAGCAACAAGCATGAGTACCGTTTGTCTATAGAGAAAATTGACAAGGATGAAGTCAGTGCGATGGGGTTCGGGAGTTATGGGCTGGATAATCAGTCTACTGTGCCTGTGTTTTGACCCAAATTTTTGGACTGCTGTCAGAAGCAAGTAAAATAAAGGCTTCTTGAGAAGGCGCAGAATTTGGGGTAAAATAGGGAAAAGCGCTGTGAGAGCAGGTGCAATAAGGTATTAGGTATCGGATTTTACT
# Right flank :  TAAAAAGCGTTGAGCAGTGTCATGTGAGGGCGAAAGAAAAAGTAGCTACTTGTATGTAACTACTTCTTGGTGCTATAATTAAATCATGGACATGGAATTTGAATGGGATGAAGAAAAAGACGTAATCAATTACCGCAAGCATCACATACATTTTGCGGATGCTCAATATGTTTTTTGCGATAAAAATCGCTTGGAGCGTTTAGATTGTTCTGCAGAAAACGATGGAACAGAGGAACGCTGGCAGACCATTGGCAAAATTGGCGAAGTGGTCTTTGTCGCCTTTACAGAGCGCAAAGACAGAATACGACTGATTTCAGCAAGGCCAGCGACTGCGAAGGAAAGGAGGTTTTACTATGGCAATAGTGACTTCACGGCTGAAGGCTGGGAGCATACCTTCTGAGGAGGTAATGGCGAGGATAAAGGAGGCCGTATGTTACCCGGTGACATTTGATGAGGATTGCCCGGAGCTCACTGATGAACAGCTTAGGGAGTTCAAGCCT

# Questionable array : NO	 Score: 6.04
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.12, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTAACCGCCGTGTAGGCGGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [6,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTAACCGCCGCGTAGGCGGCTTAGAAA with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-9.20,-9.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [7-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [60.0-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.65   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
//