Array 1 252697-251419 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG740013.1 Prevotella melaninogenica D18 supercont1.4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 252696 47 100.0 30 ............................................... TTGCTTCCTCAGCTGATTTAATAGCATTTG 252619 47 100.0 30 ............................................... TTTAAGATGTTACGCTTATACTTCAATTTA 252542 47 100.0 30 ............................................... AACAGAACGCAGGCAGCACCACAACAAGCA 252465 47 100.0 30 ............................................... TTGTTTCGTAAAGATGGTCTTCCCACTTTT 252388 47 100.0 30 ............................................... TGGATAGTATGTATATTCTCTTTCTCGGCA 252311 47 100.0 30 ............................................... TTGCAATCTCTACACCGTACTTCTTTTCAT 252234 47 100.0 30 ............................................... GAGTGCAGAGATATAGACCTGTCTTAGGGC 252157 47 100.0 29 ............................................... TACCTTGAGATATTCATAGATACGTCCAC 252081 47 100.0 29 ............................................... TTGCTCAACAGGCAAGTTAACAATAGCGT 252005 47 100.0 31 ............................................... TAACTTGGTTGAATTGCTCAACAGGCAAGTA 251927 47 100.0 30 ............................................... TAACTTGGTTGAATTGCTCAACAGGCAAGT 251850 47 100.0 30 ............................................... GAAAGTAGCTGAAGCACGGTTAGCAGAAGT 251773 47 100.0 30 ............................................... TAGGGCAATTAAGAAAGCAACTCTTAATAA 251696 47 100.0 30 ............................................... TTATGTTAAATCAATAGACGAAATGAAATG 251619 47 100.0 30 ............................................... CTAACGATGATTGCCTACACCCTTACTGGT 251542 47 100.0 30 ............................................... CTGAGCACCAGCTAAAGGCTGCGAAATGGG 251465 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== =============================== ================== 17 47 100.0 30 GTTGTGATTTGCTTGAAAATCTGTACCTTTGTGGTATCTAAAACAAC # Left flank : AACAACTGATAAAGAGAAAATAAACAATCAATATAAGTTGTGATTTGCTTGAAAATCTGTACCTTTGTGGTATCTAAAACAACTAAGAAGCAACTACCAAAGTACACGTACCCGTTGTGATTTGCTTGAAAATCTGTACCTTTGTGGTATCTAAAACAACTGGAGCAAGCGACAGAGTACCACGCAGGGTGTTGTGATTTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATAGACTATAAAACG # Right flank : TGATATTGTTTAATTTATTGGCTAACAACAAGATATAAGTTTGTTATTCGAAAATAATTTGATACTACAAAGTGAAATCCCATTCGTTTAGAATGGGATTTTTTACTTTAATGACTATGCTGAGAAGGATAAGTTTTAAGTTGGTTAAGAGGATATTGAAAGCTTGTTTTTAATTGTTAGGGTATAAAGTTCAAAAAAGTTCTAATTGTTGTCCAGGTGCGTTAGGAGTTTGTTCTTTTTCGCCATAGTAGAGTTGAATGTTTGCAAATTGTTTATCTGTTATACAGAGTATTCCGACTTTTCCTAACTTTGGTAACATGGTTCGAACTCGTTTTATATGTACCTCTGCATTTTCCATACTTGCGCAATGGCGTACATAGATGGAAAACTGGAACATAGTGAACCCATCCTTGATAAGGGATTTTCGGAAATCACTATAGGCTTTTTTCTCCTTCTTTGTTTCCGTTGGGAGATCAAAGAATACAAGAATCCACATAATT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTGAAAATCTGTACCTTTGTGGTATCTAAAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 2 253623-253037 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG740013.1 Prevotella melaninogenica D18 supercont1.4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 253622 47 78.7 30 TG.A.T..G..TG.A.....G....T..................... ACCTTCTTCATACTCCCTCGCATATTCATT C [253605] 253544 47 100.0 29 ............................................... ATAGTATTAATTAAAATTATAGTCAAATG 253468 47 100.0 30 ............................................... AAACACAGAAGAATCACGAATACCAGCAGG 253391 47 100.0 30 ............................................... CATTTGAGGCAGGGGAATCAACGTTAGCAG 253314 47 100.0 30 ............................................... TAAGCGTTATTATCCGCTGCAACGCGAGCC 253237 47 100.0 30 ............................................... TGATAAAGAGAAAATAAACAATCAATATAA 253160 47 100.0 30 ............................................... TAAGAAGCAACTACCAAAGTACACGTACCC 253083 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 8 47 97.3 30 GTTGTGATTTGCTTGAAAATCTGTACCTTTGTGGTATCTAAAACAAC # Left flank : TGCATCTTTTGCATAGAAGAAGCTCATAAATGGACTGTTAGCAACGAAAGGTACAATACCCTCTGCCTCATAGTTCCAGAACTTCAAACCACCAATCCATACGAAGATGATAAAGATAGCTATACGTATCAAATGAATACCTGTACCCTTCAGCGATGCTGCGGTATTAAGAACGAAATCTAATAATAATTTTACTTTATTCATAATCTGTTTTTTTATTGAATTTTATCTCTTGAATTTATACTTTGTGCTTGTGGAATTATCCTGCAATTTATAGATTAAGTTTAGTCTTACCCTATTTCTTTAATCTATTTTATCCCTATTATTTGGATTTGTCGGCAAAGATATATATTAATCTTCAAACCACAAAGAATTATATTGTATTTATTTCAAATAATGCTTCAAAAGACCTATTTATCATGCCTTTTATGCCTTAATTATCTGAAAAATACCATGTTTGTGGTATAATGATACTACTTTCCCCTTTATCAGCATGTTTC # Right flank : TGGAGCAAGCGACAGAGTACCACGCAGGGTGTTGTGATTTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATAGACTATAAAACGGTTGTGATTTGCTTGAAAATCTGTACCTTTGTGGTATCTAAAACAACTTGCTTCCTCAGCTGATTTAATAGCATTTGGTTGTGATTTGCTTGAAAATCTGTACCTTTGTGGTATCTAAAACAACTTTAAGATGTTACGCTTATACTTCAATTTAGTTGTG # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTGAAAATCTGTACCTTTGTGGTATCTAAAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA //