Array 1 26-599 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKZL01000017.1 Paenibacillus sp. GM1FR PAEAM_contig000017, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 26 33 100.0 34 ................................. CTATTGCTCATTATGATATGTGACATTTTATGTA 93 33 100.0 34 ................................. ACGCCGAGATAACCTAGACAGATCCCCAGAAAAA 160 33 100.0 35 ................................. AAGGTCTGGTCCAACGTTTTCTCTTCTTGGGTTTC 228 33 100.0 35 ................................. AGCATGGACAAGTACAACATCGAGGGCGTGATTCC 296 33 100.0 35 ................................. ACTGGCCTTTGTTGATCAGATCGTGGATTCCCTGG 364 33 100.0 34 ................................. AAGTACGCTACGCTCATGTCATCGAGTTCAGCAT 431 33 100.0 35 ................................. GCTGTTGCATGAAGGCTGCCCCCTTAATTTATACC 499 33 93.9 35 .........C...C................... ACGCGACATTCGTTTATCCCCCTATCAACTTTTGA 567 33 97.0 0 .........C....................... | ========== ====== ====== ====== ================================= =================================== ================== 9 33 99.0 35 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : CCCCCTTTCTATGGATCAGTTTTTGG # Right flank : TACCGAAATGCCCTGGCTGATCTTTTGACATCACCGTCGCACTCCGTTTGGAGTCAACCATCAGTTGCTTTATGTTTAGAGAGTATCCAAACTTTTATTGTTGCTGTTGTACCATTAAGAGATAGCCCTTATGCTACAGCCAAAGTCGATCCTTCAATGGATCGGCTTTATTTTATTGGAGCAATTTAGCGAGTAGAAGATGGAAGAAGATGCACATTCGACCCAACAAGCAGCCCAATTATTTGCTTCATTACAGCAAGGTTTAAAATGAGTCGCACAAAGAGTAGCTTTTTCTTTTACTCACAAAAAAAAGGAAACGAGGATGAACATCAGAATCGTGCCAATGCGCAGATTAATGTAACAGCCTATCCCGGGTAGACCTTCAGCCAGGCGATCTTGAGTATGAGAAGCTTCGCCTGGTATTGAACAGATTGGGTATGTGGAACCTGTCGTCTGGAATAAACAAGCGGGGAAGAAAGTCGGGCAGTAATCAGTGCACT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 1 27-800 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKZL01000026.1 Paenibacillus sp. GM1FR PAEAM_contig000026, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 27 33 100.0 35 ................................. ACGTTAACCGGATGCGGTTCTTTAATTGTTGTGAT 95 33 100.0 33 ................................. AAACTCAATATGGGTGGTCTGCTACGTGGGGAT 161 33 97.0 34 ..............................G.. TTTCCGAAGGAAGAGGATTTAGCTTAACGCTTGA 228 33 100.0 35 ................................. AGCTTGGCCGGATTCATTTACATCACCGCCCGGAT 296 33 100.0 32 ................................. ACCAGTCCACCAGTACGCCAAACCACCGTGTA 361 33 100.0 35 ................................. AGCCAAACACCCTGGATCAACTCCATGGCGTCCTT 429 33 97.0 36 ..............A.................. TCTGCATACGTTCCAGCGAAGTCCACAGCAGGATAC 498 33 97.0 34 T................................ CGAAGATACCGAAACTGGCGAAAGGCGGTTTGGC 565 33 100.0 35 ................................. CGTATATAACGGTCACATTGATTCTGTCGTGTATA 633 33 100.0 35 ................................. GGAATAGAAATTGAGTTTGAATTGCCACGTAACGT 701 33 100.0 34 ................................. TTTCATTTCGGTTAGTATCTTTTCATAGTCTGAC 768 33 97.0 0 ..............A.................. | ========== ====== ====== ====== ================================= ==================================== ================== 12 33 99.0 34 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : CATAGGACCGCCATCAATCATCATGTG # Right flank : TATTGTCCTTAATGACCATGTTAATGGGAAATAACTCACATTAAAGAAGTACATTGGAACGGCAAATACCTACTTATGACTGGGAAGTTGAAGTTTATAATTCACATGAACATGTAAAACAGCTTTGGGCTTACATATTGACGCTGAAATTACTCAGCATTAGAAATTCAATTCCAATTGACTATACTTGGAATGTATATTACCCAACGTAAAAAGTAATACTTGAACATTAAAGTAGTACATTATAATATAGGTAATAGAGTAGGAGGTAGTAGTGTATGAGTATGTATGAATCAGGTAAGGTAACTTCGAAAGGACAGGTTACAATTCCAGTTGAGGTAAGGAAACAACTAGGTATAGCTACAGGCGACAAAATTATTGTAATTATCCAAAATGGCGAAGCAAAATTAGAAGTTAGGAAACAGAAGAAGTTAACTGATCTTGTAGGAATCTTAAAGACAGGTCAAGAACATGATCTTCAGGAAGCTAGGAAGTCAGCG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 1 7826-6370 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKZL01000028.1 Paenibacillus sp. GM1FR PAEAM_contig000028, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 7825 33 100.0 34 ................................. CCTGATAATAGGGTGATGCAGGATTTACGTAATT 7758 33 100.0 35 ................................. ATCGGATTGGAGTCCTCTGGTAACTCTTCGTTCAA 7690 33 100.0 35 ................................. CAAATCGAATTTAATATCACCGCTGTTATATTCAT 7622 33 100.0 35 ................................. ATACATTTGCAGGTGCTTTAATCTATTTTGCTCAG 7554 33 100.0 35 ................................. CGGATCGGGGAGCTCAACCAGGAAGACAGGAAGTA 7486 33 100.0 33 ................................. ATTTTTGGAGATAGTCTTTTCTTATTTGCACCG 7420 33 100.0 36 ................................. GATCCCCGGTACAGGCTGGATATGTACGTTAACGAA 7351 33 100.0 34 ................................. CATCACTGACATTGATATCCGATTGGCTGATAGG 7284 33 100.0 36 ................................. ACCAATACCTAAGTCAGCCGAAAACAATTTAATAAG 7215 33 100.0 35 ................................. TACCAGTTGGAATACTGGTTGCAGGGTCAACTCAC 7147 33 100.0 34 ................................. AGCATTTGTGGTGCTAACGGAAACGGTTGGGTCG 7080 33 100.0 34 ................................. CTCTGTATCAAAGTCCACTCGCTTGCCTGTAATC 7013 33 100.0 34 ................................. CTCTGTATCAAAGTCCACTCGCTTGCCTGTAATC 6946 33 100.0 35 ................................. AGATTGTAGAATCTGTCTCCAATATAGGCTCTGAA 6878 33 100.0 36 ................................. ATCTTCGATAAGGTATATTTTCGATATCACATCAAA 6809 33 100.0 35 ................................. GATCTGTCCGGTGATCCCGACTATGGTGAGGGTGG 6741 33 100.0 36 ................................. AGCTTCGGTAGATCCGGTTGACTGCTGCACTGCCAC 6672 33 100.0 35 ................................. TCTTCCAGCAGATCATTGACCGCCTCCACCACATT 6604 33 100.0 34 ................................. CTGGTACTACGATTGTATGTCTTCGCAAATGATG 6537 33 100.0 34 ................................. ATTTGTCAGGACTCCTTTTATAATATTCTCATAC 6470 32 97.0 36 ...............-................. CTTTATTGTGGGTGCCGGCATACCGCTGTATACACT 6402 33 97.0 0 ...............................T. | ========== ====== ====== ====== ================================= ==================================== ================== 22 33 99.7 35 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : GATGAGTATGTGGAAGTAGGTGCAATGATTGCTTATTTTGATTAAGTACGATGTAAACACGATAGATAGTGAGGGCAGAAGACGGCTATCTAAAGTGGCAAAGAAGTGTGTAGATCACGGACAACGTGTACAGAATTCCGTATTTGAATGTATATGGACGTTACCCAGTTTAGACGATTAAGATTTGAACTGGAAGAATTGATTGATAAGGATTCAGATAGTCTTCGATTCTATAACTTAGGTGATAAGTACAAAAGTAAAGTCCAACAGGTTGGAGCCAAAGATTCTTATGATATCGATGATCTATTAATACTCTAGCAGGTGCGAATGCCAAGCTCACATAGTTTCCCTGGGGGATTCGCACCACGAAATATGTCGAAAAGGTCTTTTTTGTGACCTTTTGGCAATGATTTTATGTCATAAGAGTTTTAAAGTAGTAGAAATATCGAAAATACGTTAATAGCTATCCTTGAAAACTAGTTTTTACGTCACTTTTCGCT # Right flank : GGTACAGGATAAACAGTGGCATCCTCTAAGGCAAGTCTCACTCCGTATTTTATAGATAAGTGGCCAATTCGAAAAAAAGTTGTCTAACAAATTCATTCTTTTGGTGACTTATAGAAAAAGAAAGTGATTTGAATACGTTCATGATTGAGCTAATAACCCGGAAATGCCATTCTAATAATCCGGTCACTGGAGACATTTTGAGTAACATGCATCATGTTAAATCTGAATAGTTCCTCTGTCCATCGTTTGAAACAATAAGCCCTAGTAGCACACCTACCACGTCCTGGCTTTCATATGATTCGTAATATGACTTAGCTAGAGAAACCTTAGAGTTGAGAATGTCTGTTGTATGTTTAATATATTGATAGTGGATGAAGCATGAATCCAGATGGACCGAAATAATTGAATTAGATGAACAAACCAAGCACTTGCGGATAATGCGTGGCACATGCTACGTAATTGGACCACGGTTCCAGGTACACATAAAGAAGGGACGTTTA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 2 19312-18259 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKZL01000028.1 Paenibacillus sp. GM1FR PAEAM_contig000028, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 19311 33 100.0 35 ................................. AGAATAGTCTTGTTTGAACAAATGTTTCTCTCGTT 19243 33 100.0 35 ................................. AAATTGAATCGCATCCACAGGAATGCGTTTTTCAT 19175 33 100.0 35 ................................. AGTTTCGGATTGATCGTATGGAACGATCGGAACCC 19107 33 100.0 35 ................................. TGCCTGCTGGTAGTGCCGTCAGCCTTGTGATATAT 19039 33 100.0 35 ................................. ACATACATATTGTTGAGAGTCGCGTTATAAGATAA 18971 33 100.0 35 ................................. ATTGAACTTATAAACGTCTCCAAAGGCATCAATGG 18903 33 100.0 34 ................................. GATCTGAATTGCTGGACGTGGAAAGTAAACGTGA 18836 33 100.0 35 ................................. TGTTGTCGTATCATCTTTATGTCCCAAGCGATCCA 18768 33 100.0 35 ................................. TGGTTCCTCTCTATTTATGTAATCTTTCTCACTTA 18700 33 100.0 36 ................................. AACTTACACCGGATACAACATTAAAGGGACTACGTG 18631 33 100.0 35 ................................. AAGAGAAATTTGATAGGGAAAACAATCTTATTTGA 18563 33 100.0 35 ................................. ACTGAACGTACCAGAGATACCATATGTGGAACCTA 18495 33 97.0 35 ....T............................ TGCATCTCTAAAGTCAGGGTACAACGTTGATTCAA 18427 33 90.9 33 ....T.....A..............G....... AAGGCATTTACGGAACTGGTCTTTAGTGACGCG 18361 33 97.0 35 ...................G............. ATCTGGAGTCAATTCAACATAAATAGATTGATCCG T,G [18357,18359] 18291 33 81.8 0 ...AA............A.GTA........... | ========== ====== ====== ====== ================================= ==================================== ================== 16 33 97.9 35 GTCGCACTCCGTATGGAGTACGTGGATTGAAAT # Left flank : TTTTTTTTATTTCTTCTTCTGAATAGTTTAAAAGTCTACAATAATGCCAACCCTTGTTAACAAAACGATAGGGGAGCTGGCTTATTGTGAGAAAAAAAATACTTATAAAACCTGCAGGTAATCATAAACCTAACACCACAGTGCCCAACTGGGGAATTAAAAAAATATTAGACCAAAATAAAAAAGTATTGGATCTTCTCAAGAAACGAAAATGAGAAACTTGTAGGACGGGGGGATAGTTCATCCTTGATCCATTGGTAGTAATGAATTGCGAAAGGCCATGAAGTCAGCTGAAGGAGGTGCGAACCCGAAGCTCACATGAATTCCCAGGGAGATTCGCACCTCGAAATTTGTCGAAACCTTCAGTTTTATGACCTTTTGGCAACAAGGATATTGAGTTTATGTGCTGTTGTGGGATATAGTGGAGCTAATATGTGGAATAAGTATCGGAAATACGTATTAAGGGATTCTAAACATAACTTAATACGTGTATTTCCGCT # Right flank : TCTCCAAGTATGCTTCTGACAAAGCGCTGTTCTCATAATAGTCTCTGAAATTGTATTGTACCAATCTGAAATATGACATATCTAACCCCTTTGGTATTTATTAATTACCAAAGGGGTAGAATACTTTCTTTAGTTTTTAGTAACTCTTTTCTTATAGTTAAACAAAAAAAGAGAGAGCATTTTTGCTCTCTCCTATAGGATAATCTCTGCATAGCGTTAAAACATTTTATAAATCTTCCTTATGTAGTTTCCCGATAAAACCTCTTGGAACAATAATTCTATTTTTTCTTACGGGATCTTGTTTAACTTCTGACTTAAGAATCGTTGTTGGTTTGGACGTTCTGACCTGAGAAGGACTTTTTAGTCCGGCTTGTTGCCAATATTTAATCTCAACATCAAACTCATTTCTCGCGTCCGTCCTTGTTACAAAGGTAATGATCATTACCAACAATCAATATTGGTCTTGGGACATTTTTATCCTCCTGTGACTCCAGATCGAT # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.90,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 3 35680-35105 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKZL01000028.1 Paenibacillus sp. GM1FR PAEAM_contig000028, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 35679 33 100.0 35 ................................. ACCCTTAATCTCTGACTTGTACCACAGACTGGATT 35611 33 100.0 35 ................................. AGCAAGGACGCTTTAATCTCGCTATTACGGGCGCG 35543 33 100.0 34 ................................. CGAAATTATCGCGAGCTGTTTCGATTGAGCTTCC 35476 33 100.0 34 ................................. TTGTTCGCGAGATAGAACCGGTTGGCGTGCGTTG 35409 33 100.0 35 ................................. CTCTGACTGTACCAGAGCCTTGACGATAAATTCTC 35341 33 100.0 35 ................................. TTCTGAATTTGAGGGATAGTGGTGAGGCCTTGATC 35273 33 100.0 35 ................................. GACGACACAGCTGAGGGTTTCGGCGGCAGCGTATC 35205 33 100.0 35 ................................. CACGATACGCGCGTCAAGGTAATGCTGAGATTGGA 35137 33 97.0 0 ...............................T. | ========== ====== ====== ====== ================================= =================================== ================== 9 33 99.7 35 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : AATTACAGGGTTTATTTCACATCCTTCCTGATGTTTTAAATGAGGAAAGTACGACAGTCGTTTATGAATCTCTGCTGCCACAAACAGAGGTGTCAGAGGACATAAAAAGGAAGCACTTGGAATTCGTCCAACATCGTAAAGATGCGTAGTGTAAAGTTGAATCAACTTGAATCCAGTTGCGAAGGATTCACATGATCGGTTCGAAGATATGAAATATTATGCGGTGAGGAAGTATGCTTTCTATTGTTTGGCTCGAGCGAAGCTATGTTATTAGCTATTTGGACACTGGCCAGGTAGAGGTGCGAATGCCAAGCTCACATGATTTCCCCGGGAGATTCGCACCTCGAAATTTGTCGAACACTTCAGTTTTGTGACCTTTTGGTAACAAGGATATTGAGTTTATATGTTGTTGTGGGATATAGTGGAGCTAATATGTGGAAAAAGTATCGGAATTACGTATGAAGGTATTTTAAACATAACTTGATACGTGTATCTTCGCT # Right flank : AGTTTGAATCTCAGAAAAGTTATCTTGGGCGTTTTTCGCACCCCTCTTGCATATATTGAAATCAGGAGGGATTAAGGAATTATTTGGAATTAACTCTGTATTGAGACTGTGGATTGATTTGATGAGGATCTAGGAAGCTGAACCCAGTAATCATGTCGCTCTTCGGATAGAGTTACCTTCACCCAGCCGGTGGGAATTAACCAAGGAGAATAGAAATGGGAAGGTAGTCACTATTAATAGGTAGTGTTGTTTTCGTTACTTTTTACCATTTAGTACAGCTTCAGCAGTCAATAGTAAAGTCACCTTGAAATCTTACAATTATAAGGGACAACCATAAACATGAGCCGGTTGCTAGCGTAGATCGACTGAAGGAACTGGAAGCAGAGCTCCAAGAGATGATGCACCGGTTGTTTCAAGAGAAAGAGCATACGCTTGCGGATACACAAGAAGAACTGGCGATTGTAAAAAAAAGCAGTGCACATCTTTAGCAAACCAAAGAG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.00,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 1 512-3 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKZL01000036.1 Paenibacillus sp. GM1FR PAEAM_contig000036, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 511 33 100.0 36 ................................. CCTTGCTAACCCTCTTGAAATATGTCGCCCTTCTTA 442 33 100.0 35 ................................. AGCCAATCACAACGCCCCCCATAATCTTTTATTTT 374 33 100.0 35 ................................. CACACTGGTCGGATACAAGAAGACTCGCCCTTTTG 306 33 100.0 35 ................................. TGAGTTACTGTTTCGGTAACCATCATCTGGCGGTT 238 33 100.0 35 ................................. ATAGTCCATAACTGGCGGCAGATCAAAAACACCAA 170 33 100.0 35 ................................. TCACTTAATCCCCCCTTTCTATGGATCAGTTTTTG 102 33 100.0 34 ................................. CTATTGCTCATTATGATATGTGACATTTTATGTA 35 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 8 33 100.0 35 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : AAAAGTGACGTAGATATACGATACGCACGTAAATGTTGATCAAAAGAGAAGCGCTATGGCAATCGTAAATGTTCCCTTGAACGCAATTGGGGCAGGCCAGCCATAAATAGGTTGATGCATGCATGAGATTTGCTTTATGCGCTTTGATTTTTGGTATAATGGAAGTGTATAGAGATTTGAGTGGCTGTTATGGAATTTCTTGATCCCCGAGTAGATTTTGTATTTAAAGTATCTTTAGCGTTAAAAATACCATTTTAAATCGAGTCCTAACTAAAGTGAGATCCACTACTTAAAGAGATCATTTTAACAGGTGCGAATGCCAAGTTCACATGATTTCCCTGGGGGATTCGCACCTCGAAATTTGTCGAAAAGGTCTTTATTGTGACCTTTTGGCAATGATTTATAGTTGAAAGTTTGTGATAACCGGTTTAAAGTAGTGGAAATATCGGAAATACGTTAATAGTTATTCTTCAAGCATAGTTATTACGTCACTTTTCGCT # Right flank : TAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [1.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : NA // Array 1 119403-120779 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKZL01000004.1 Paenibacillus sp. GM1FR PAEAM_contig000004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 119403 33 100.0 33 ................................. GCCTACGTCTTTTACTCCGATTAAACGCGCCAT 119469 33 100.0 33 ................................. CGTGTATTCAACGCTAACCTCTCCGTATTCCCA 119535 33 100.0 34 ................................. TTGATCGTTATAACCTCCTCGAAAAAATTGCAAA 119602 33 100.0 34 ................................. ATCAACATCCGAAAAAAAGTTTAATTGAATGATC 119669 33 100.0 36 ................................. TGAGTATGGGCAGGACACCAGATAGGGCGGGAGCGG 119738 33 100.0 32 ................................. TGTACATAAGACCACGGAAGAGTGGCCGAACC 119803 33 100.0 35 ................................. TTCCATCTTGGTAGGCGTTTCAGGCAGCAACTCAC 119871 33 100.0 35 ................................. TATTCAAACTACCACCTTCGATCTTTTGGAGTAAG 119939 33 100.0 33 ................................. GTCCTTCTCGTCCTGTAGCGCGGCTTTCTGAGA 120005 33 100.0 34 ................................. AACGCCGCAAAAGCGGGTAACATTACCGTTGTGT 120072 33 100.0 35 ................................. ATTACCGTATGGGTCTTGGTTAAGTCCTCAAAACA 120140 33 100.0 35 ................................. AATCAGGATTGCGAACTTTCTGTAAACCATACCTG 120208 33 100.0 33 ................................. TCCTGTATGCACTAACTCCAAACCATCCCGCCA 120274 33 100.0 35 ................................. CTTCATGGAGATCTTAGCCATAAACCTACCCTCCA 120342 33 100.0 35 ................................. GCCAATATTGGCATGAAGCGCGCTTTGATTGCGCC 120410 33 100.0 35 ................................. CGCAATAGTAGCTCTGGAAGTAGTGAAGAGATATG 120478 33 100.0 35 ................................. GCCGCATTTCATTGGGCAGACGGAAAACTTTGGCT 120546 33 100.0 34 ................................. GGCGGAAGTAAATCATATAGGCTGGTGTCCTTGA 120613 33 100.0 35 ................................. ACCGAAGATTGATCGTAATCAACTGAATCCCGGTA 120681 33 100.0 33 ................................. GACGATCTATAAAACACGAACGAAATTGATTCC 120747 33 97.0 0 ...............................G. | ========== ====== ====== ====== ================================= ==================================== ================== 21 33 99.9 34 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : TGCAACCAGACATTCTCCTGTTCGATGAGCCGACATCGGCACTCGATCCGGAGCTGACAGGGGAAGTGTTACGTGTCATCAAACAACTGGCACAGGAAAACATGACGATGATGATTGTCACGCATGAGATGGGCTTCGCCCGTGACGTTGCGGATCGTGTATTTTTCATGGATAACGGGGAGATTGCCGAGGCAGGTCCACCAGAACAGATCTTCGGCAATCCGAGGCTTGCACGTACCCGGACGTTTTTACAGCGGGTGGAAGTGGAAGGATAGAAGGCTGAACGTAGATGTAGCCAGGTGCGAATGCCAAGCTCACATGAAATTCCTGGGGGATTCGCACCTCAGATTTTGTCGAATGTGGCATTTTTGTTCCCTTTTGGCAATAAATACTTGAATATTCTGGATGTTGTAGATTAAAATGAATATAATAATTAGCTCGATAAACGAAAACACGTAATAAGTATATACTCATATGCTGCTGTTACGTGTTTTTTCGCT # Right flank : TAAAGATCCTTTCTTTGAGTTCAGTTTGATCAATCCCTCGTATGCATCTAGCCCTTGGTAGTCGATAAAGTAAATTTATTTAATATAATCGGAGTATTTACAAAATATGGAGTTCTCTATTCCTATTAATCAATTATAATGAACATACTTAAAGAACAGGGAGGATTGACCTTGGAACATCGCGAAAATGATGTGGATCGTTATTATAACGACACATTGCCACCACCGCCTTATGTAGTGCCAAAGACCAATAGTAAGTCGATTGTATCACTAGTTTTGGGGATTCTGTCCGTCACGATTCCTTACGTGGGTATTGTAATCGGCATCGTTGCGATTATATTTGCATCTTTGGCCTTCAAAGAGATCAGAGTTCGCATGGAGCAAGGAAAAGGGTTAGCGATTGCTGGCCTTGTCTGTGGAATCATAGGTACAGCCATTTATGTATTACTTATTTTGCTTGTACTATTGTTTAATTTCGCTATCTCAAGTTCTGAAATTTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 2 124609-126392 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKZL01000004.1 Paenibacillus sp. GM1FR PAEAM_contig000004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 124609 33 100.0 33 ................................. GTTGACAATGCAGATGAATCTTTCTTGGATTTT 124675 33 100.0 35 ................................. AACCTCACGCTGTTTGACCAATATAAGCCCTTTTA 124743 33 100.0 34 ................................. CTAAATTCGTCCAGTTAATTACGTAAATTTACAT 124810 33 100.0 35 ................................. TATGGTTACCGCTCGTTCTGTTCGGCGGTATTAAA 124878 33 100.0 35 ................................. CGTTTATAATCGTAATATACTATGTCCCGTTTAAC 124946 33 100.0 34 ................................. TATTGTATAATTCAACCCTGTTAGATTTAAGTTA 125013 33 100.0 34 ................................. TCCGGTTCCAGTGGTTCCGGTGGGTCAAGTGGTT 125080 33 100.0 34 ................................. CATTCAAATCCAAGTACCACAAGGTATGAAATAT 125147 33 100.0 35 ................................. TTTCTAATCTACGGCAACGCCATCTACTCCGAAGA 125215 33 100.0 35 ................................. CGACCAATGTGTTATGCTCATATCTGTTTTCGGAT 125283 33 100.0 35 ................................. CAACTACAGTCCTAAAAGGTATAGAAACAACATTT 125351 33 100.0 34 ................................. CAATTGCGATTAACTCTAACCGCGTAACCGTTGA 125418 33 100.0 35 ................................. ATCATATACGTCAAACATTTCTCCGGAATATTCGT 125486 33 100.0 34 ................................. ACCCATGATCATCGTTAGTGCAAGGGCAAGTCCG 125553 33 100.0 35 ................................. AGGTTACCACTCTCAAGTGAGGATGGTAATTGTGC 125621 33 100.0 35 ................................. TTTTGCATACCCAAGCCCTGTGTCATTAGCTGTTA 125689 33 100.0 35 ................................. TACATACTGAATGCCATCTGACCAGTTTCCTGCTC 125757 33 100.0 33 ................................. TCAAGCGCGGTTACTCGCGTCGTTAAAGCCACG 125823 33 100.0 35 ................................. AGTAAGGCCATAGTTACTATACAAGGTGGCATCTG 125891 33 100.0 35 ................................. TGTAGCAATGTTGTTGTCTTTGCAAGGTTCATGGT 125959 33 100.0 35 ................................. TCGGTCACGCTGATAATCTCGTTGACCAAGTAAAA 126027 33 100.0 34 ................................. AAATTCTCAATTGGAGCTGGGTGGTTCGGGACAA 126094 33 100.0 35 ................................. CGTACGGTAGTCAATATTAACGGTTTCATCATATT 126162 33 100.0 36 ................................. CTCTGTTATCCCCGGTGGGGTGAGCTATTTGCTAAT 126231 32 84.8 35 .........TAA..-.........A........ ACGACAAGCCTTGGAAGCGAGCTGCACAGCGTTGG 126298 32 87.9 31 .........TA..-C.................. AATCCAAGCGCTTTTATGGGTTATGTGTTCA 126361 32 81.8 0 .........T..G.-A...A......A...... | ========== ====== ====== ====== ================================= ==================================== ================== 27 33 98.3 34 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : ACAGTTCTTCTTTATTATCGAAAAAAGTATAGATCGTTCCCTTGCCCACATTGGCAAGTCTCGCAACCTGCTCCATCGTTGTGGCCTTGTAGCCAAACAGGGCAAAGGATTTCTCGGCAGAATCCATCACCTGTTGCCTTCGATCTATCGTTTTCATCGCATATACACCTCCTTGTAGGTTGAAAGGATAATGGGTAAGGTAAACCCTAATTTTTGACCAATATACTATCATGGTCAGTTGGTCGTTAACAACTGTAGCACTTGAGCAGGGAAGGTGGATGTGATCTTTGTCATAAACGGATAGGACAGGTGCGAATGTGATGCTCACATGAAAACCCTGGGGGATTCGCACCTCAGAATTTGTCGAAATGGGCAAAATTGTTACCTTAAGGCAACATGTAGGCATAATTTGATTGAATAATGATATGGAAAGTCATAGAATAATAGTGAAAAAACGTGTTTTTGATGGTTCGGGTTGTTGAGATACGTGTTTTTTCGCT # Right flank : TCTTTGTAGTAGCGTTGTTACAGGTACGGGTGTCTGATCGCACTCCGTATGGAATGCAAATCGAATCCCTAAAAAAGTCTTACCTTTCTCATGCTAAGCATGGATAAGTGGGTAGGACTTTTCTATTTCAGAGAAATAAAAAATATTAAGTATAGAAAAAATACTGAAAACTGAAATGTGCTATTAAATGCAGCATATTTTAAGATCTTTTGTTAAACAATAGATTTGACCTATGGTAGAAAAATCAATATAATGTTATTAATTGTAAAATAAGGAGGAAGGGTATGTCGAGGTATTATGATGGATACGGATTAGACTCGACTGTGACACTTCTCAGAATAGCTTATGGTCTTGACAACTGGAGAGAGGTCGTTAAGTTAGGTGAAACACTTTATGAAGAATCACTTCGTATATATAATTTACAAATGTTGACTAAGGAACAGGACATCGTTGAAATACATACGCAACGGGCAATAGTATATTACATTGGATACAGTCGT # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : NA // Array 3 136302-136536 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKZL01000004.1 Paenibacillus sp. GM1FR PAEAM_contig000004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 136302 33 100.0 35 ................................. ATACAAATGTTATACAGATGCTGATATAATTTCAA 136370 33 100.0 34 ................................. TATCGAGACATTTCCGCACCCATACGTCAGGATC 136437 33 100.0 34 ................................. GTTAACCTGGCGATCAAGCAACGTATGGCCGCGA 136504 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= =================================== ================== 4 33 100.0 38 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : GAAGTAGGTGTGATGATTGCTTATTTTGATTACGTATGATGTGAGCACGATAGATAGTGAAGGCCGAAGAAGACTATCTAAAGTGGCAAAAAAGTGTGTGGATCACGGTCAGCGAGTGCAGAACTCGGTGTTTGAATGTATACTGGATGCTGCCCAATTTAGACGATTAAGATTCGAACTGGAAGAATTAATTGATAAGGATACAGATAGTCTTCGTTTCTATAACTTAGGTGATAATTACAAAAGTAAAGTTCAACATGTGGGTGCCAAAGATTCCTATGATATGGGTGATCCGTTAATACTTTAGCAGGTGCGAATGCCAAGCTCACATGATTTCCCTGGGGGATTCGCACCTCGGAATTTGCCGAAAAGGTCTTTATTGTGACCTTTTGGCAATGATTTATGATCGGAAATTTGTGATAACCGTTTTAAAGAAGTAGAACTATCGAAAATACGTTAATAGTTATTCTTCAAGCATAGTTATTACGTCACTTTTCGCT # Right flank : GCAAACGGAACTATTGGTTACGCCGAA # Questionable array : NO Score: 8.86 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : NA // Array 1 847-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKZL01000053.1 Paenibacillus sp. GM1FR PAEAM_contig000053, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 846 33 100.0 35 ................................. TACTCCCCTAACTCGTGCGCCCCATTTATTACAGC 778 33 100.0 34 ................................. ACGTCCGCCACGCAAACCACCTCCTAAGCTTTGG 711 33 100.0 35 ................................. AGGGCCTTGTAACTATGATGAGAAATCAAAACAAG 643 33 100.0 36 ................................. AAAATCAATCCATGCGCGTTCCCGTCTGTATCCAAA 574 33 100.0 33 ................................. CTTACCAAACTCTTTTAAGCTATTGACAGCAAA 508 33 100.0 36 ................................. TTCAAACGCCAACATGGCCGAAATACCGTTATTGAC 439 33 100.0 35 ................................. ATTTCAGTGACCCAACAAGTGAACAAGCCCAAAGA 371 33 100.0 34 ................................. ATCAACTCGCTAATCGTGGTGTAGCTACCGCTTC 304 33 100.0 35 ................................. GTACACAGGCATAAAAATAAATTTAGTGGGGTGGC 236 33 100.0 34 ................................. TCCAGACCAGAAATCTTTACGCTAGTGGCATCGG 169 33 100.0 35 ................................. CGCTCTGATCATAGGACCGCCATCAATCATCATGT 101 33 100.0 35 ................................. ACGTTAACCGGATGCGGTTCTTTAATTGTTGTGAT 33 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 13 33 100.0 35 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : | # Right flank : T # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA // Array 1 1-777 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKZL01000055.1 Paenibacillus sp. GM1FR PAEAM_contig000055, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 1 33 100.0 34 ................................. GTTAACCTGGCGATCAAGCAACGTATGGCCGCGA 68 33 100.0 36 ................................. GCAAACGGAACTATTGGTTACGCCGAACCGCAACAG 137 33 100.0 34 ................................. GCAATCCCATTGAGCGCATTATTCTCCGCGCAGT 204 33 100.0 35 ................................. ATTCCCAGCAATCGCGGCACACGTTACAGCCAATG 272 33 100.0 34 ................................. GGTCTAGAAAAGTTGGACTTCGATCACGGTCAAA 339 33 100.0 35 ................................. ATTGATGGGTAAACGTCCGATCCAAAGTGACCATA 407 33 100.0 35 ................................. CCACTAAATATAATGTACCAGTTTTGTCCACCGTA 475 33 100.0 33 ................................. CCGTTAACCGTAGTCGTGACAACACCCGCAACG 541 33 100.0 35 ................................. TCGCCATTCCAGTACAGATAGAGTGACGGTCAAGC 609 33 100.0 35 ................................. AGGTGTCAACTACAACACAGCCCGTACAAACAATG 677 33 100.0 35 ................................. GTTTTGGCCGCGATAATTACGCCGGTGACTTCGCC 745 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 12 33 100.0 35 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : | # Right flank : TAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-3.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 1 535-27 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKZL01000061.1 Paenibacillus sp. GM1FR PAEAM_contig000061, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 534 33 100.0 35 ................................. GTTTTGGCCGCGATAATTACGCCGGTGACTTCGCC 466 33 100.0 35 ................................. TACGATCGTCTGGCCGTCCTGCTTGTACATGAAAT 398 33 100.0 35 ................................. AGTGAAGGTGATGAGACCGTACACAAGGCCATACA 330 33 100.0 34 ................................. TATCAGGTGTACGCACTTGGTGAATGGGGTGTGC 263 33 100.0 35 ................................. AGCAGCCAGCCGAGCTCCTTGGTCATCTTGCCGAC 195 33 100.0 35 ................................. CAATATGCCCGGAAGATCGACACCCGGCGCACTGG 127 33 100.0 35 ................................. TACTCCCCTAACTCGTGCGCCCCATTTATTACAGC 59 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= =================================== ================== 8 33 100.0 35 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : CAACACAGCCCGTACAAACAAT # Right flank : TACGTCCGCCACGCAAACCACCTCCTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [16.7-20.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA //