Array 1 37605-37370 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMRU010000001.1 Lactobacillus paragasseri strain D6t1_180914_C1 NODE_1_length_199181_cov_29.7494, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 37604 36 100.0 30 .................................... ATGGAAAGAAAAATAAAACAATTAGTTCAT 37538 36 100.0 30 .................................... TGAAGCACATCACGCTTTAGCTAAGTCTTA 37472 36 100.0 30 .................................... GCTGGTACTCAGTTCCTGATATGTACATGG 37406 35 94.4 0 ..........................A......-.. | TA [37376] ========== ====== ====== ====== ==================================== ============================== ================== 4 36 98.6 30 GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC # Left flank : TCATGCAAGAAGAGGCTGACATGCAAAGCCGCGGTATTCGGTCAGTTCCTTACTTTATAATTGCTGGTCAACAATTTGATGGTGTTCAAGATGTTTCAACCTTTAAGACAGCAATTGGAGCAGCTTTAGGGATGAAGCCAGCAGAGTTTTTGAACTTTTAGAAGTTATTTTAAGATCCTACGTTTTTATAGGCGTAGGATCTTTTTTATATGGTGATTTTCTGGTATTATTATAGTTCTGAATAATATCTGTTATATAATTTTGAAAAGGAGATGAAAATGAAAAACAAACTAAATCTTTTTAGCGTTGGACTACCAAGTAATGAAGACTTAAATAACTGGTCCAAAGATCTAATTAGGCAGAGATTAGAAACCACGGCAATAACGTCGGACCTTATACCATTTGTATCTGAAAATTCAAATTATGAATTAAATGAGAATATGGTAGCTCTATATGATTTCCATCAAAGGATGCGTGATTCAGAAACCAAACGCTTGGTA # Right flank : GTAATTACACTACTGGTCCATTGCTTTTGCAATGGGCCTTTTTATTATCTTCCAAACCGTTTTTCACCCTACAGTGCAAAAGTCTATTTTAAATGTAAGTGCCTGTTTATAAGTGTCAAGAAAAATAATATTAATGAATAATTTAAAAACGACTAAGAATGTTTTATTAGTATGTGGTTTAAGTGCATCATCAGGTTTTATGGCTGTTAACATGAGAAAAGCATCAAAGAAAGTTGGTTTAGATTATAAAATTCAAGTTTGCAGAGAAGCAGAACTTGGTGACTATGCAGATCAAATTGCTGCCTTAATGTTGGGTTTCTTACTTAAAGACGGAGTTTGGTGCGATTAAATTACAAGTACTTGACAAGGTAAAGTAATTTTAATGAAACTAGATTATTATTCAATTTCCATTTGATTTTATGGATTACATGAAATTAGACAAGCAAAGAATCATCGCGGATCTTTTCCTCAGGGCGCGGTATGTATAAAGTAACTATCTT # Questionable array : NO Score: 5.79 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //