Array 1 7376-6944 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAKEF010000032.1 Adlercreutzia sp. ZJ154 Scaffold31_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 7375 36 100.0 30 .................................... TCGGTTGATGACATGTAGCCCGGTGCGGTT 7309 36 100.0 30 .................................... AGACTAAGCAGGATTCTCAAAATGATAACG 7243 36 100.0 30 .................................... TCCATTAAGGCTTTATTCTGTTCTTCGAGC 7177 36 100.0 30 .................................... GCAGCAGCGAAATAAAAAGCAGCCCATTCC 7111 36 100.0 30 .................................... CCAGATAATCTGGGATATAGTCAAATGAAT 7045 36 100.0 30 .................................... CGGGGCGTGGCTGTGGATTGCAGGGGACAC 6979 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 100.0 30 GTTGGATTACCAGTCAGATTGTCACTGCTCCAAAAC # Left flank : | # Right flank : CGTTAGAGCAAATTCTTCTTTGCGAAGAAGACGAACAAGCTGACTGGCAAGATACTTCATATTCAAGTAAACCCTGCTCAACAACAATTTTCCTCTCTGAATTATGAAGTTTAAAACTATCGTACTTTTCTATAAGAAGCATCTTTGTTCCTAAAAAAATAGCATGATCAAATACTTGAAACAACTCTTTTTCTGTCAAAAAAATCTTTAAATTAACGAAAAGCAGAGTGGCTTCTAATCCCATATCAGATACAAAATCCAAAAACTTTATTAAATTATCAAAGAGCGATTCTCCTTCAAGCGCTTCCACTCCAAAACCAAAACTCTTGAGATAACTACATATATCCCATTCTAAAGTAAATCCATAATCGCATCTAAGCTGAAAACCCAACGATGACACTATCGAGCCAATTTCGCTACTTAACTCATTTAATTCAGCACGAATATCATCATCTTCCATCATTAGTAGACGAATTCGCTCATGTAATTTTCCACCAAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGATTACCAGTCAGATTGTCACTGCTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.90,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 1-2541 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAKEF010000034.1 Adlercreutzia sp. ZJ154 Scaffold33_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1 36 97.2 30 ....A............................... TACTCCCGGATATTTTTGGTTTCAAAAAGA 67 36 100.0 30 .................................... GAGTACCCCAGCGACGCCGTCATCTGTTCC 133 36 100.0 27 .................................... TAGCAGCAGCGCCACTAGCAGCAGCGG 196 36 97.2 30 ....A............................... TCGGCTCTGTGATTATGTCGGTGCATAGCC 262 36 97.2 30 ....A............................... TTACTTGTAATATTAATACTTGTATTATTA 328 36 100.0 30 .................................... CTTGATTGCGTTTAGTTCTCCCTCTGTCTG 394 36 100.0 30 .................................... GGTCTGTTGACTTTGCTTTACATAACATTC 460 36 100.0 29 .................................... TAGGCATGCTCATATACCCTCCTTAAATG 525 36 100.0 30 .................................... CCGAAGGCGCTGTCGAGGGCGGCATCACGA 591 36 100.0 30 .................................... CCCCAAGAGACGGAAGCGATGTGATAGCGT 657 36 100.0 30 .................................... GTCGTTATAGGCATCATTGGCTTAGTGCTG 723 36 100.0 30 .................................... TGGATAACTTTTCGATGGTCGTGTGTAAGG 789 36 100.0 30 .................................... GTAGCGGTAAACATTAGTAACCTTGGCATT 855 36 100.0 30 .................................... TCCCGGAGGCGATTATCAATCGTTCAATTA 921 36 100.0 31 .................................... AAAGTCTCGAACGAAACATACATGGCTTGCT 988 36 100.0 29 .................................... GCATTCTGCATAAACAATTACCAAATCAA 1053 36 100.0 30 .................................... ACTCCTATTCTACGTATGTAATTTTTGCCT 1119 36 100.0 30 .................................... TCTCCAGCGAGAAGGTAGAGTCCCACCAGT 1185 36 100.0 30 .................................... AAACCTTACGCTTAATACCGTAGACCAAAA 1251 36 100.0 31 .................................... AACCCAAAATATACCTACGAGGTACATCTGA 1318 36 100.0 29 .................................... AGAAAATGGCTTGCGCGATAGAGCGCGTA 1383 36 100.0 30 .................................... ATACTGACTGGCTTCATAGCGCGTCATAGT 1449 36 100.0 30 .................................... AGCGCTCTGCCAAGTTTAACCTTGTCTATT 1515 36 100.0 30 .................................... TATTAATGTTTCTTCTACTGGTATAGGTCC 1581 36 100.0 30 .................................... TCTTGCGCCTGCTCTACGCCTAATCGGTAG 1647 36 100.0 30 .................................... CGGCAAAACGGCGTAACTAAAGTTTACGAA 1713 36 100.0 30 .................................... AAAAGAGAGCAAGATTTGGTTTGGGATATT 1779 36 100.0 30 .................................... AATTGTCCCGCGTTGTGGAAATTCGCACCT 1845 36 100.0 31 .................................... GAGCCATTGCGCAGAGTAGGGCATCCGGCTA 1912 36 100.0 30 .................................... GGCGACAAGGAGTTCGCAAACGAGATAGTT 1978 36 100.0 30 .................................... CATCCATTCCGCTCATGTCAGACATTGTGT 2044 36 100.0 30 .................................... TTCGTTAACGCATACCATTTGGTTCTGTCG 2110 36 100.0 30 .................................... TCGGTTGATGACATGTAGCCCGGTGCGGTT 2176 36 100.0 30 .................................... AGACTAAGCAGGATTCTCAAAATGATAACG 2242 36 100.0 30 .................................... TCCATTAAGGCTTTATTCTGTTCTTCGAGC 2308 36 100.0 30 .................................... GCAGCAGCGAAATAAAAAGCAGCCCATTCC 2374 36 100.0 30 .................................... CCAGATAATCTGGGATATAGTCAAATGAAT 2440 36 100.0 30 .................................... CGGGGCGTGGCTGTGGATTGCAGGGGACAC 2506 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 39 36 99.8 30 GTTGGATTACCAGTCAGATTGTCACTGCTCCAAAAC # Left flank : | # Right flank : CGTTAGAGCAAATTCTTCTTTGCGAAGAAGACGAACAAGCTGACTGGCAAGATACTTCATATTCAAGTAAACCCTGCTCAACAACAATTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGATTACCAGTCAGATTGTCACTGCTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.10,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 460-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAKEF010000005.1 Adlercreutzia sp. ZJ154 Scaffold5_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================================================================================================================================================================= ================== 459 36 100.0 189 .................................... GCAACAGCCACGGCTTATGAAACTCAACCGTGCTATAATCCTTCACATAACGCGATGCCCCGCCATGGTCGGGCAGCGTAATTACAGAACTACCCCGCTAACTGTCCAAGGTCACGCGGGGTTTTTCTCTTCTTTCCACCGTTCGTCATTCCCTTCTCACCAGCACTAGACCGATGATGCCTATAACGA 234 36 100.0 30 .................................... CGCAGTATTTACGGTAGTTATCGGCATCAT 168 36 97.2 30 ....A............................... GATATCTCCGTCGTCCTCAATCTCGACAGA 102 36 97.2 30 ....A............................... TACTCCCGGATATTTTTGGTTTCAAAAAGA 36 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================================================================================================================================================================= ================== 5 36 98.9 70 GTTGGATTACCAGTCAGATTGTCACTGCTCCAAAAC # Left flank : AAAAAAGAGGCAAAGGTAATTGCCCACATGTAGATCACCAGCGAGTTGAAGATGGCGAAACAACAGATGAATTTTTAAGCAGAACCGCCAAACAACAAAAAAATGTTGAATTAGATGTGAATGAAGAACCACATGAGATAACACAAGATGAAATAGATTCAATAGCCTCTAAACTGGATTCAATAGTTGGTATAAAATTAACAGAAGAGAATTTAAATGAAGTTTTAAATAGTTTAACCCCAGATCAAATGCAACAAGTTACAGAAATTGGGTTTAAAGCGGCTCCAATGTTTGGTTTGCCATTTTCAGATGAGGATTATGATCAAGAGGTAATAAATACACAAATGTATTTTGCCAACCTTCCAGATTATGGAATAGGTGGAAACAGATCTTCAATTGCACAAATGTTTGATAAAATTGGGGAATCACCAATGAACAATGGTGAGAGCATGGATGTTGAGCATTCATATAAAGAAGGTTTAACTCCAAACGAATATTTT # Right flank : C # Questionable array : NO Score: 3.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-3, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGATTACCAGTCAGATTGTCACTGCTCCAAAAC # Alternate repeat : GTTGAATTACCAGTCAGATTGTCACTGCTCCAAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGGATTACCAGTCAGAACGACACTGCTCCAAAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.90,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //