Array 1 9975-10248 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWGO01000051.1 Streptomyces sp. SID8364 SID8364.c51, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 9975 29 100.0 32 ............................. CTGGACCACGTGGTCAAGATGCGGCACGGGAA 10036 29 100.0 32 ............................. GAGGACGGCGTACTGCCCGACGACCGGTGGGC 10097 29 100.0 32 ............................. CCGTTGCGGTCGGGGATGTACGCCGCACCGAG 10158 29 86.2 32 .............T..T....G...C... TGCGGGAGCGAAGCCACGGGCTACGCCTTCCG 10219 29 79.3 0 ........T....C.......T....GGT | C [10231] ========== ====== ====== ====== ============================= ================================ ================== 5 29 93.1 32 GTGCTCCCCGCGCATGCGGGGATGGTCCC # Left flank : CCCGCCGCGCCCTACACCCCGAGTGCGGTCCCGGCGGCGGTGATCAGGTCGTCGGCGGCCTGGAGCGCCCGTTCCCGTGCCTTCTGGACCGCAGCCGTGCTTGCCGGCCGTCAGCACGTCGTAGGCGGCCTGTACGACGTGCTGCGCCGCCCCGTCCAGCCTGGGCAGCATCAGGCTCACTCGAAGCCTGGGCGGGGCGGGTCCAAGGCGCGCGTGTGTCGCGCACGCACGAGGCGCAACCTTGACCACGGGCCCCGTGGCGGGCGTTCGGTATCCGGCGCCACACGCCGGCCGTCCGCCCCGGTGCCATGTGCTGCCATGCGTGCGGCCGGAGCGGGTGGTGTACCAGGGAGCATGGCGGGAGACATGGCAGCAGTCGGTGACCCGCCTTCACGTGGCGAGCGCGGTCCCGTCCACTCAAGGGCCGAGTGCCTTCGGGGCTTTGGTGAAAGTGAAGGAAAACTGGTGGGTGGGGGCGGTAGCGTCGCAGGTCACGAAGG # Right flank : CATCCGGCG # Questionable array : NO Score: 5.71 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCATGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCATGCGGGGGTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 62794-62338 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWGO01000009.1 Streptomyces sp. SID8364 SID8364.c9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 62793 29 100.0 32 ............................. GTAGTGGTCCGATGGCGATGCGTCAGGTTCCA 62732 29 100.0 32 ............................. TCGCCCTCGGCTCAGGACACCGTGGGCCGCCA 62671 29 96.6 32 .................A........... GAGGCTCCGCACACCGCGGTGGTTGATCTGCC 62610 29 100.0 32 ............................. TGCTACGCCCCGGCACCGTCGCTGAGGGCGGT 62549 29 96.6 32 .................A........... GCCGAAGCGAAGTCGGCGACGGAAGGAGCGGC 62488 29 93.1 32 ..............G.....A........ GTAACGGGCGACACCGCGGCGATCCAGGCCGC 62427 29 96.6 32 ........A.................... CACCGGCGGATGCATTCCGCCGGCACCCGGAG 62366 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 8 29 97.9 32 CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Left flank : GAGCGACAGGGGCCTGCATTTGGCGTCCGGAGTGAACTACGGAACGGACGAGCACGAAGCAGCAATCTGGTGACCGTGATCGTCCTCACCAACTGCCCTCCAGGCCTGCGGGGCTTCCTCACCAGATGGCTCCTGGAGATCTCCGTCGGCGTGTTCATCGGCAATCCTTCATCCCGCATCCGAGACGTGCTGTGGGACGAAGTCCAGCAGTACGCCGGACAAGGCCGTGCGCTTCTTGCCTACACGACCAACAACGAGCAGGGCTTTACGTTCCGTACCCACGACCACGCCTGGCACCCCACCGACCACGAAGGCCTCACGTTGATCCAGCGCCCCATCGACAGCAAGGGCGCAACGAGTAGTGCGAAGAAGCCAGGGTGGAGCGCAGCATCCAAGCGCCGCCGATTCGGAAAGAGATAGGCGAAATTTCCGATATCTCGGAATCGGTGAAAGTGCTCGAGGAACTGATGGGCCCACGGTAAAGCTGCAGGTCATCAAGT # Right flank : GCGCGGCCCTGTGATCTCCGCGCGAGCGGAGGTGAGCCGCCGACGGACCACCGGACGCCGATAGCTCTCCGAGGTCAGTGGCGCGGGGGAGTACTCGCCCTCCGCATCAAGTTCGTTCTCATGGCGTGGCGGCGACGGCCCGGCTGTCCGCCTCGTCGGCGAGGCCACGGCACGCTCGGCATTCAAATAGTATCCGTCTGGGTATGCTGAGGTTATGGCTGATACGACCGTCAAGATCGACACCGAGACGCGGGACCGCTTCGCCGCCGTCGCCGCCGCCCGAGGACAGACTGTCAAGGGGTACCTCGCCGCCCTGGCGATAGAGGAGGAGAATCAGCTCGCGCTGAAGCGCGCGACGGGTTCTTTCCGGGCCGCTGTGACACGTCCGGGGTTCGCCGACGCCTTCGACCGGGACTTCGGCGGACTTCCCCAGCGCCGGGTGGCCTGACATCTTGGACCTCCACGTCGACATCCGCTGGCTCCTCGACCGCCAGGAGGAA # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCCGCGGGGATGGTCCC # Alternate repeat : CTGCTCCCCGCGCCCGCAGGGATGGTCCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 72424-74586 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWGO01000009.1 Streptomyces sp. SID8364 SID8364.c9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 72424 29 100.0 32 ............................. GGCTAGCGGCTAGGCCACCTTTATGCCACAGC 72485 29 100.0 32 ............................. GTCTACCCCAAGAAGTGGAAGTCCGTTGTCAA 72546 29 100.0 32 ............................. GGTCCACGGCCGCGCGGAAGGCGATCGAGCGG 72607 29 96.6 32 ..............T.............. TGGGCGCGTGGGTGCGGGCGGTGGTGACCGAG 72668 29 100.0 32 ............................. GGATCATCGGCGGCACCCCTTCCGCCATCGAG 72729 29 100.0 32 ............................. AACGACGCCGCGCTGAAGTTCTCTGAGGCCGA 72790 29 100.0 32 ............................. GCAGGGCACACCACCATCCAGTGCGACGTCAC 72851 29 100.0 32 ............................. CATCCCCACAACAGCGCCCGGCATCACAGCTG 72912 29 100.0 32 ............................. GGGGACGTCGACGTTGCCGAGATGATGAAGGA 72973 29 100.0 32 ............................. GGCCGACGTTCTGTGACCCGGCACCCCAGCTG 73034 29 100.0 32 ............................. CGGGTGCCGGCGGAGTTCCGGCCCCTGCTCAA 73095 29 100.0 32 ............................. CTCGCTCCCCGGCGGCCCCGGCCCCGAGAACG 73156 29 100.0 32 ............................. CTGCTTCCCGAGGAATCCGGCCGGGGGGTGAC 73217 29 100.0 32 ............................. GAAGAAGGGCACTGCCATGACCGGAATCCCTG 73278 29 100.0 32 ............................. CCCGCCCTCGATGAGCGGCAGTTCCTCGTCTT 73339 29 100.0 32 ............................. CGAGCCCAGGACGCGATTGCGAACGCGCGGCT 73400 29 100.0 32 ............................. AGCTTCTCCTTCTTCAGGTCGGTGCCCGCCTC 73461 29 100.0 32 ............................. GGCTCCGCCTCCACGCCACGGCGGTCGCCAAC 73522 29 96.6 32 ............................A CAGGCGGCCATCGCCTGGGGAGCCGCTCTGCC 73583 29 100.0 32 ............................. CCGGCGCCGCTGATCGTCGTGCCCACCGCGGA 73644 29 100.0 32 ............................. GTTCGACGCGGTCGGAACGCGGGCGGGGTCCG 73705 29 100.0 32 ............................. GACGCCGAGGTGCTGCCCGTGCTCCTGTCGGA 73766 29 100.0 32 ............................. GCCGAGGAGGACTCGGAGCTGCGCCGCTGGGG 73827 29 100.0 32 ............................. CGTGATCTTCGCCATGACGGTCTCGCCTTCCT 73888 29 100.0 32 ............................. CCTGCTGACCACCACCCTGCTCGACCAGTTTC 73949 29 89.7 32 ...........G.GT.............. GCCCCGGTCGGCACGATCACCCTCGAAACGCT 74010 29 89.7 32 ...........G.GT.............. ACGGACTGGGTCGCTTCCCGGCCCCGGCTGGC 74071 29 86.2 32 ...........G.GT.........T.... GCCCAGCGCGGCGCGGTGTTCGGCACCACCGG 74132 29 96.6 32 .................A........... GGCCTGCACGGGAACGTTCAGGTACAGGCCGC 74193 29 93.1 32 ...........G..T.............. CCGTTCGGCGCGACGTGCCAACGTGCTTCGCG 74254 29 96.6 32 ...........G................. TCCCGGTGCCCGTACCGCCGGTGTCCGGCCCG 74315 29 96.6 32 ...........G................. ATCGAGGCCACGGAGCCGAGCCTGGAGGCGAC 74376 29 96.6 32 ...........G................. GCCTTTCGTGACGATGGCGGCACGCCTCCGTC 74437 29 93.1 32 ...........G................T GAGTGCGACCCGCTTGGGCCTGACCAGAATGA 74498 29 96.6 32 ...........G................. TGCCACGCCTCGTACGGGCTCATGTGCGAGAG 74559 28 96.6 0 .........................-... | ========== ====== ====== ====== ============================= ================================ ================== 36 29 97.9 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : TTGCCTTCCCGATGTCATGCACCCCAGCCAGCCACACCAACAGCCGCCGGGCATCCTCCACCCCGCCGGGCAACGGCCCCGCAATCACATTCCGAACCTGCTCGGGCAGCCAATCGTCCCACAACAGCCCCGCCACAGCGGCACTGTCCTCCATGTGCCGCCACAACGGCAGCCAACCCTCCGTATCCCGATCATGCTTCGCCCACACTCGCCGAACAGCACCCTGCAGCCGCCCCCCAAGGCCCGAACAGGCCCCACCCTCATCAGCCATGTCAGATGAATACAGGCAAACAACCGAACAACACGCCCTGATCAGAAAATCCGATGGTTCTTCGATCGACAACATCACGTCAACCGACAGCTCGCCGTAAGATGCGCCGACGTAATCCACGACCTAGCACAACGGACAGCAGGAAGATGGCGAAATAACCCATATGCCGGAATCAGTGAAAGTGTGTGAGATCTCGGTCCTCCCGCTGTAACGCTGCAGGTCAGGAAGT # Right flank : CTGCAAGAGGTGTGACCGATCGAGCCGCGCCGTACTGCTCCCCTGGCGTCCGTGCTGTCGTACGCGGCCGAGGTACCACCACGATCTGCGAGCTATAGGCTCGATGCCACGGCATCAGCCGCAAGGGGGCGGAGCCAGCTTCATGGCCGATACGCCGCATTCGGTGAAAGTGCTCGAGAAGTGCACCAACCCGCTGCAAAGCTGCAGGTCAAGAAGTCTGCTCCCCGCACGCGCGGGGATGGTCCCACCGATTGTCAGGGGGCGACTTGATCCAGTACCTGCTCCCCGCACGCGCGGGGATGGTCCCGCGGCTCAGCCGTTCAAGACGAGCGCCTGAACCTGCTCCCCGCACGCGCGGGGATGGTCCCCGGTCGATTCTCCCGATCGCGTCGTGCAGGTTCTGCTCCCCGCACGCGCGGGGATGGTCCCTCGATGTTCCAGCCGCCCGGCCCGGTGAGCTGCTGCTCCCCGCACGCGCGGGGATGGTCCCTCCGCTACCG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 74803-75599 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWGO01000009.1 Streptomyces sp. SID8364 SID8364.c9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 74803 29 100.0 32 ............................. ACCGATTGTCAGGGGGCGACTTGATCCAGTAC 74864 29 100.0 32 ............................. GCGGCTCAGCCGTTCAAGACGAGCGCCTGAAC 74925 29 100.0 32 ............................. CGGTCGATTCTCCCGATCGCGTCGTGCAGGTT 74986 29 100.0 32 ............................. TCGATGTTCCAGCCGCCCGGCCCGGTGAGCTG 75047 29 100.0 32 ............................. TCCGCTACCGCGCCGAGGATCTGGAAGAACAT 75108 29 100.0 32 ............................. CACCGCCCCGCCGCACGCTGCCCACGCGCCCC 75169 29 86.2 15 .......................C.CTT. CGCGTGGTCCGAGGT Deletion [75213] 75213 29 100.0 32 ............................. GTCGACTGGTACCGCCAGGCCGTCGCGGCGAT 75274 29 93.1 32 ...........G..T.............. TTCGTGCGGGGCGGCGGCGGGTGGCCGGCGGT 75335 29 89.7 32 ...........G..T.......G...... GCCAGGTCCAACGCGGCTCGCTCCACGTTCAC 75396 29 89.7 32 .............C...A..A........ ATCCGTACCGCCGGATCCCCGAGGCCCTCCGC 75457 29 93.1 24 ...........G.C............... GAGGTGGAGCGAGCAGTCAAGAAG Deletion [75510] 75510 29 89.7 32 ........T..G.C............... AACGCCGCGCAGGTCGCCGAACGGCGGGCCGC 75571 29 93.1 0 ..............T..........C... | ========== ====== ====== ====== ============================= ================================ ================== 14 29 95.3 30 CTGCTCCCCGCACGCGCGGGGATGGTCCC # Left flank : GTGTCCGGCCCGCTGCTCCCCGCGCCCGCGGGGATGGTCCCATCGAGGCCACGGAGCCGAGCCTGGAGGCGACCTGCTCCCCGCGCCCGCGGGGATGGTCCCGCCTTTCGTGACGATGGCGGCACGCCTCCGTCCTGCTCCCCGCGCCCGCGGGGATGGTCCTGAGTGCGACCCGCTTGGGCCTGACCAGAATGACTGCTCCCCGCGCCCGCGGGGATGGTCCCTGCCACGCCTCGTACGGGCTCATGTGCGAGAGCTGCTCCCCGCACCCGCGGGGATGGCCCTGCAAGAGGTGTGACCGATCGAGCCGCGCCGTACTGCTCCCCTGGCGTCCGTGCTGTCGTACGCGGCCGAGGTACCACCACGATCTGCGAGCTATAGGCTCGATGCCACGGCATCAGCCGCAAGGGGGCGGAGCCAGCTTCATGGCCGATACGCCGCATTCGGTGAAAGTGCTCGAGAAGTGCACCAACCCGCTGCAAAGCTGCAGGTCAAGAAGT # Right flank : CGCCATGACCTGGAGGGGGAGGGAGACGACAACCTTCTCCCCGCGCACGTGGGCCTGGCGGGCCAAGTCGACACCGGACACCTCGCCGCCGCTCACGACTGCCCCCAGGTGGAGTAGCTGAGGTTCAGGTGCCCGAGCCCGGATAGGTGCTGCGCCTGGTCGACCAGTTGGTTGCTGAACAGTCGCCTCGCTGATGGCTCGCTGTAGCGGTCGATGTGGTCGAAGACGACGCTGTGGTCCTTCATCGCCCGCACCCGCCAGTTGCGCACCTGGTCGGGGGTCAGGTCGTCGAGGACGAGCTCCTGGTCGTCGTCGTCGACGTCGGCCGTCTCTGGCTTCAAGGCCGGAGCGACGGCGGCAGCGCGCGGGGCGGGCAGTATGACCGGTGCCGCCGGCGCGGCCGGGACCTCGCCGGTCGGCTGCTCGGCGGCGGCTTCGGCGCGGGCGGCTTTCGCTTCGGCCTTCTGGGCGCGGTACTGCCTCCACTCGGCCGCCTGCGC # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:-0.13, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACGCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //