Array 1 60643-59577 **** Predicted by CRISPRDetect 2.4 *** >NZ_LYAQ01000387.1 Escherichia coli strain ECOR20 ECOR20_contig_64_consensus, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 60642 29 100.0 32 ............................. CGGTGATGCGCGGTATCGATCAGCATCCGGCT 60581 29 100.0 32 ............................. GCTCATTTCAAATGGTCAGGTCCGGTGGTTTT 60520 29 100.0 32 ............................. TACTGGAAAAAGCTGGCGACGGTGAGCGCAGC 60459 29 100.0 32 ............................. GGCACGGAATTGTTATGCTGTTCCCCTGACCG 60398 29 100.0 32 ............................. ATCCGCCGCCGGTTAACGCTGGACCAGTTCCG 60337 29 100.0 32 ............................. GGCGAGTCCGTCAGCGGTGCGCCGCTGCAACA 60276 29 100.0 32 ............................. GGACAATGTGAAAAGCTTAATATTCATTACAT 60215 29 100.0 32 ............................. CGACGTTTTCTAATATCACCCAGCAATCAATT 60154 29 100.0 32 ............................. ATTTCATCAAAGCATTAAGGGATGGAATAAAG 60093 29 100.0 32 ............................. CGTCCGCGGCTGCAACTGATGCCGGGGCTTAT 60032 29 100.0 32 ............................. AACCTTGTCGGGTCGCCCGTGCGTCATGATGA 59971 29 100.0 32 ............................. AGTTCCCACAAACCTGGGTGCATCTCGCGTTC 59910 29 100.0 32 ............................. ACTGCAAAGTTCTTCACGCTGGTTTTTATGCA 59849 29 100.0 32 ............................. CCAGCCGAAACAACGCCAGCAAAATCGACCGC 59788 29 100.0 32 ............................. GGATATAGAGCGGGTACTCGAGCGAAGCGGGG 59727 29 100.0 32 ............................. CCAGGACAGGCCGTGACGGTTGCCATTGAGTC 59666 29 100.0 32 ............................. TTTTTGTTCTCTTCAAAACGCCGAACAACCAA 59605 29 93.1 0 ............T.....A.......... | ========== ====== ====== ====== ============================= ================================ ================== 18 29 99.6 32 GAGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTTAAGTTAGCGCTTATGGGG # Right flank : GACGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACTCCCAACTCCCATTTTCATACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCTGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAATTTGTTGCTTCTACCGAAAGTACGGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGTGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCACTGTTGAAATACAATTTATCGCCAACAA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //