Array 1 989948-988141 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPTX01000002.1 Prevotella sp. R5027 sequence02, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 989947 32 100.0 33 ................................ ACGTTGGTAATTTCGTTGACGATACCGTTGGAT 989882 32 100.0 34 ................................ CGTGATACCTATCATATCAATGTCGACGCAGCTC 989816 32 100.0 35 ................................ CCTTAATTTAACGTTATGAAACAGATTGATTATAA 989749 32 100.0 35 ................................ TACAGTTGCTAATTCTATATTCGCAGGTCTGCAGA 989682 32 100.0 34 ................................ TTGCAAACAATCATCTCGCAACCGTACATCCTCC 989616 32 100.0 33 ................................ CTCAGTCTTTAAGATAGATTCTATTGAGCGAGT 989551 32 100.0 33 ................................ CGTGACTTTGTCTATGATTGCTGGTCGTTGCGA 989486 32 100.0 33 ................................ TCATTCCGCAATGTCGACTTTACCAATTTTACA 989421 32 100.0 33 ................................ ATAGTTCAGATGAACGACTATCGTTCATCGCTA 989356 32 100.0 35 ................................ TCAATTCTATCGGTCAGCCAAGTGTTGGTACTTAT 989289 32 100.0 33 ................................ CGACTATTTTAACCCGCTCTATCAGCGACTCGG 989224 32 100.0 33 ................................ TCAATCTCACTCTGGTTATCGTTCTACCCCCCT 989159 32 100.0 35 ................................ TTTACCTGATTATGCTGTAAACCTTTTTCGGCTTG 989092 32 100.0 34 ................................ AGACTCGAGAAGAAATCAAGAACGTTGCTGAAGA 989026 32 100.0 35 ................................ TAATCTTCCTTACATACTTACGCTCCGTCCGTGGC 988959 32 100.0 35 ................................ AGATTCCAAAGGCGCATTTGTTTCTTCTGCCTTTC 988892 32 100.0 33 ................................ GTACTAAACGAGATGATTTTAGCGTTCGTGTAT 988827 32 100.0 33 ................................ TGCAGTCTTGTGGAAAGTATCGCCATAATGACC 988762 32 100.0 32 ................................ AATCTTCGCAGGACTGCAGACACGAGAGCAAA 988698 32 100.0 33 ................................ CCTGTCCTTTAACGACAACAAAAAGCGGTGCAA 988633 32 100.0 36 ................................ AGACCTCAATAATGTTTGCATTATGACGCAGTGGCC 988565 32 100.0 34 ................................ TGCAAAGCGAGCGTCAGGATTTCGGAACTTACGA 988499 32 100.0 34 ................................ TACCATCAACAACAGCTATTTTGTGAATCATAAA 988433 32 100.0 33 ................................ AACCGTCTCAAAGCATCCACAAATCTCCCTACG 988368 32 100.0 32 ................................ ATTTTTCAGACAAAAGTGCCTACCTTTGCAGC 988304 32 100.0 33 ................................ TTGTCCGAGTCGCTAAATTGTCCGGGCTTGCCA 988239 32 100.0 35 ................................ TTTTCCGCAAAGATAGTCTATATCATGTGTTGTGA 988172 32 93.8 0 ....................A........G.. | ========== ====== ====== ====== ================================ ==================================== ================== 28 32 99.8 34 GTCGCGCCCCACGTGGGCGCGTGGATTGAAAC # Left flank : ACATCTATCCGTTTCCTGGCCTTGGACTTGCTTCTCTCGTAGGCGTTGCCCACAATATCAAGTTTTTCCTCCTCGACAAGTCTGGCCCAGTACGCATGCACTCTGTCACGAACCACTTCCGAGTAACCTTGCAGTTTCTCATCCCAAAGTTGGACATCCTTCTGGTGATTGTACAGATACGTCAGTCCACGCGCAACATCTCTTATCTGCTCTGGGGATAGGTCATGTATAAACCCGACATTGAGCAATATCAAAGTACATACCCTACCGCTGGCATCGCGATAGGACTCCTTCAGACGGTAATACTTCTCGTCTTTACACGTCTGTGGGTTGTAACGTATTTGGGACGTAAAATTCATGCCGCAAAGATAAGCAATCCCTACGACATTGCTGTGTTCTACATTGCGATTTTGAGCAGTTTGACCACGCAAACCCCTATAAACACTGGAAAAAATTCTGAAAAAAAACATTAGAGCGTCAAACTTGGGTTAACACTAATT # Right flank : CACCTACACTCAGATTCTTGAAAGATAGAAGATTTTGTATGTGCGTGCAGAATACTATAGGAATCCCTCGCACAAGCCTCAAGGCTGCAAGGAACAGGCAAATCCTTTGCGGAATCTTTGCGACCTTTGCGACTTGGCGAGATTTTTTCGGAGCAAGAGGATGGGGATATAACAAATCTTTGCAACCTTTGCGACTTGGCGAGGGTTATTCGTGGTAAGGGGATGGGGATAGAACAAATCTTTTACGGCCTTTGCGACTTGGCGAGGGTTATTCGTGGTAAGGGGATGGGGATAGAACAAATCTTTTACGGCCTTTGCGACTTGGCGGGATTTTTCGTGGTAAGGGAATGGGGATAGAACGAATCTTTGCGACCTCTGCGACTTGGCGGGATTTTTCGAGGCAAGGGGATGAGGATAGAACAAATCTTAGCGAGCGTGGAGCTTGGCGAGGGGGCTTTCGTGGCTGGAGGACGGTGATAGACGCAGTGAAAGGGTATTAT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGTGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCGCGTGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.30,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 995874-992084 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPTX01000002.1 Prevotella sp. R5027 sequence02, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 995873 32 100.0 34 ................................ TGTCATGAATACCTTTTCGCCACGTTTCAATCGG 995807 32 100.0 33 ................................ ATTTATGTCAAAAAACAACATCCCGCCTCTTTT 995742 32 100.0 32 ................................ TATCGGTCAGCCCTCTGTTGGTTCATATCAAT 995678 32 100.0 35 ................................ CGACTATTTCAATCCGTTATATCAGCGACTTGGAC 995611 32 100.0 34 ................................ GTATTCTCTTGATGACCTCGGCACGTCCGCACCT 995545 32 100.0 34 ................................ CGGGACACCTATCATATTAATGTCGACGCAGCCC 995479 32 100.0 34 ................................ TTGATGATCTCGGAGGTAACGCACTTGTCGGTGC 995413 32 100.0 32 ................................ TGCTGCCGTTGCATCATATGTTAGTAGCTACG 995349 32 100.0 34 ................................ CTTTTTGACGACCCGAACCTTTGTACGTCATTGT 995283 32 100.0 34 ................................ CGAAGAACCCTGCTACTGGTGTTCGTGATGACCT 995217 32 100.0 34 ................................ ATGATACGTATCACGTTAATGTCGATGCAGCCCA 995151 32 100.0 35 ................................ TTCACCGTGGCTTATGTAAGTCCGTTGAAAGTGGT 995084 32 100.0 34 ................................ CTATGTAGCTGTGATAGTCCTGACTCTGTGTCTA 995018 32 100.0 34 ................................ TAATCACTGGTTGCCTACCGTTCATACTTTCAAA 994952 32 100.0 34 ................................ TCCCCGTCCGTTTTATCGGGCTTATGGGCGTGGT 994886 32 100.0 34 ................................ CTCCTGCGTCAAGAAGGCATTATCCCGGTGGTCC 994820 32 100.0 35 ................................ CAACAGTGAAGTGAGTAATCTAATAGGCACGAATG 994753 32 100.0 34 ................................ AACATTTCCACCTCTGCCAGTCCACTGGCTTCAC 994687 32 100.0 33 ................................ ACGCTGTCAAAGAGATTATTAATACGTTTCACA 994622 32 100.0 34 ................................ AGCGAAGCAGGACATATTACAAGCACTGGCCACG 994556 32 100.0 35 ................................ TTAGCCAGTTCGAAGCAGGCATTGCGTGCGTAGAT 994489 32 100.0 35 ................................ AGGATAACGGATATTGTCGATTAAGTGAGTATAAT 994422 32 100.0 34 ................................ ACTACGTGCTGTCGATGCAATTTGTTGAGCGCAT 994356 32 100.0 33 ................................ AAGGGAACAGAAAAGACCGTTGCCGACTTGTCC 994291 32 100.0 35 ................................ AGTCCACACCTATTTTGTCACATAGACCCCCCAAA 994224 32 100.0 34 ................................ TACGCTGCGCTGCGCTTGCGTCCTCAGCCACTAA 994158 32 100.0 35 ................................ TTTGCTAAATAGTTTTGGTATATACTTAAATTATA 994091 32 100.0 34 ................................ AATTCGAATTTAAGATTGTTCTCAGCCATAAAGT 994025 32 100.0 34 ................................ CTCTATCAGCGGCTCCATACGTCCCGCCGCCCAG 993959 32 100.0 34 ................................ TTTGAATGGGCGTGTCACTGGGCTGTGCACTGTG 993893 32 100.0 33 ................................ TGACAGAGCTGCAGAGGCCATCGAGAATCACAT 993828 32 100.0 34 ................................ ACTCCTTGCTGGTCTTGATACTCTCCATAATGGA 993762 32 100.0 34 ................................ CTGTGTGCTCTGTCCTCTGCCTGGCAACAATCAG 993696 32 100.0 34 ................................ TTCCTGGGCCTCGGCTATTTCCTGCTTCTTCACA 993630 32 100.0 35 ................................ CGGATAATTGGGATAGCCGTAGCCAACACCCCAAC 993563 32 100.0 34 ................................ CGCATCCGGCTGGAGGCTATCGAACTCTACGAAT 993497 32 100.0 34 ................................ AGTAGCTCAACTGGATAGAGCAACTGCCTTCTAA 993431 32 100.0 34 ................................ CTGAAAGAGTTGCGACCGAGGATGGAGAGATGGC 993365 32 100.0 34 ................................ ACAAAGGAACGTAGTTTAACGAAGAAAGACTGCG 993299 32 100.0 34 ................................ ATTAATACGTATAATTATGATTACAACTAATGAC 993233 32 100.0 34 ................................ AACTTAGAGCTGTCTACGCTTGTGCGTGTAGTCG 993167 32 100.0 34 ................................ CTTAATATGGCTTGATTTGTTAGCACCTCCGCAG 993101 32 100.0 32 ................................ AATTATCTAAAGATTATGCGCCGACATGCTGA 993037 32 100.0 33 ................................ TTAAACTCACGTCTCCAGTTCTCTTTCAGCGAA 992972 32 100.0 33 ................................ CCTTTAGTATGCGTAGTAAGTAACCTTGATACC 992907 32 100.0 33 ................................ TTTGAATGGGCGTGTCACTGGGCTGTGCACTGT 992842 32 100.0 35 ................................ TTTTCCTCTGCGTCTATATAAGACTGCATCGTATC 992775 32 100.0 34 ................................ CTGAAAGAGTTGCGACCGAGGATGGAGAGATGGC 992709 32 100.0 33 ................................ ATAAAGGAACGCTACACAGGCAAGGACAAGGAC 992644 32 100.0 33 ................................ ATGTCAGACATGCAGCAGACATAACGAGAGGGG 992579 32 100.0 33 ................................ TTGTTTCTCCGTTAATTACGACGGTTCACTTCT 992514 32 100.0 34 ................................ CGCCATAGGAACTTGACTTAATTTTTTGGAAAGA 992448 32 100.0 36 ................................ AAAAGGTCAAGACCATAGTTACGATACCGAGGTTGT 992380 32 100.0 32 ................................ TGTACTGAATCTTCTAATTGGTCACAAGTGGC 992316 32 96.9 36 ........T....................... TGCGTCAACTAAGATTCTCTACCCCCGAGCGGAGAC 992248 32 100.0 34 ................................ AAATCACGGAACGCACCCACCTTTAGGTTTGGCA 992182 32 100.0 35 ................................ CTCGACCTTCCTGTGTGTTTCCTTTGGCTCGTACA 992115 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 58 32 99.9 34 GTCGCGCCCCACGTGGGCGCGTGGATTGAAAC # Left flank : ATATGTTCGTACTGGTTACTTATGATGTGAATATCACATCGCCTTTAGGACAAAACCGACTCAGACAGGTTGCTAAAACATGTCTTAACTACGGAAAGCGCGTTCAAAATTCTGTATTCGAATGCGTCCTGACTGAAGCTCAATTTGTACTGCTAAAGGATAAGCTGTCTGAAATAATAAGTCAATCGGATGACAGCATTTGTTTCTATAAATTAGGTAACAATTGGAAAAGACATGTAGAAAGAATCGGCAAGGACACGTCAGTCGATGTGACTGACGTCTTAATATTATAATGCACTTCACCCATACTTACTCTCAGAATGATTTCGTTTATGCGAACCCTAACCGTTGCACTAAAAGCAGGAATTTTCGCAGAGACTAATACACAGGCAGTTAAGCTTTTTGAAAGGACAATATGCATTTAAATAGCTATGCTTTTCGCCATGTTCGCAAAATATAGTAACTTTGCCTCTGATTATTAGGCAATTGTCTAATAAGCG # Right flank : AGCCCCTCTATATGTATGAACTTAACCCAACTTTGACATCGTATTTTGCTTAGTTGTTCTGTATCAGCAATTTAGTGTTTTTAAAAAGTCCTACTGTGTTCTACAGATTTTTATTTTTTTAAATGGCACTTTACTGATTTTCAACAACTCGTAGATTTCAGCTGCACTATCTGTAGGCACACTGCACAGTCTGGTCTCGACAGCCTCTCCAAGCGCATTTACTGCTGTGGTAGTAACTGCTTTTTGAGTCTTCATGATCCGCATGATCTCCGACCAGTACGGTGTCGAACGCTCCCGCCCATGCTCATCCTTGCCTTGCTTTCGCCGGGCAACCTTCATCTGATGGCGCACGGTGTTTACTATCCAGTAAGCCAGCAGCCCTAAGAAAAGGTGTGCGTCTGCCCTATTGTCAGTCTGGTGGTATATGGGCCTGAGGCTGAGGTCGGTTTTGAGCTGCCGGTTGGAGCATTCTATTTCACGTATAAGATTATAGTAGTTCC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGTGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCGCGTGGGCGCGTGGGTTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.30,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 1026561-1030264 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPTX01000002.1 Prevotella sp. R5027 sequence02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1026561 36 100.0 30 .................................... TGACCGACAGAGTTCAAGAATGGGCCATAT 1026627 36 100.0 29 .................................... ATATAGTGAAAATATAGAAACAAATAGTG 1026692 36 100.0 29 .................................... GAGTATATGCAACTAACTCAACATTAAGA 1026757 36 100.0 29 .................................... TGGACGAGGTCGTCACGTACTCCAGTTGC 1026822 36 100.0 30 .................................... CTGTAGTCATCGAGACATAAGAACCTTCAG 1026888 36 100.0 29 .................................... AAGATTTGTTAACAAATCCAGTCCGTAGT 1026953 36 100.0 29 .................................... CGCAGGATGCTCATATAGCTCAGACCTGG 1027018 36 100.0 29 .................................... GACAAACTCAAAGATGATGGTGCGCTATG 1027083 36 100.0 30 .................................... GCTGCCATCGTGAACTCGATGCCCTCCAAA 1027149 36 100.0 29 .................................... GCAAGAGAGCCGAAGAAATCAACAGGCAG 1027214 36 100.0 30 .................................... GACAAAGCGCATTTCTATACTCAGAAGAAA 1027280 36 100.0 30 .................................... TGAACGATGTCTCTTGCGAGCCGTTCCTGA 1027346 36 100.0 30 .................................... ACTATCTTCGATGCTTTCACTTGGCTCTTA 1027412 36 100.0 30 .................................... TCATGGACGGTGAGGTAAAGCACGACCATG 1027478 36 100.0 29 .................................... TATACAGCCACAGCAAGCGGCACCATCGC 1027543 36 100.0 30 .................................... GCAAGCATCACGGTATCATCGCAATACCTG 1027609 36 100.0 29 .................................... CCAGCGGTTTTATACTAAATACAGTAAAC 1027674 36 100.0 30 .................................... GGTTATCTCAAACTCAACACAGCCAGCACG 1027740 36 100.0 29 .................................... AATCTGAATTTCGCGTCGTTCGAGAAACG 1027805 36 100.0 30 .................................... GGGATATATCACCAAGATAGAGACATTCAA 1027871 36 100.0 29 .................................... AGGCTTCGAGAATGGTCTCTATGCTCGTG 1027936 36 100.0 29 .................................... TCCATCGCAATACATAGCATCATAACCGA 1028001 36 100.0 29 .................................... GCTTGCTCTTGCGTGTGTCATGCCATGCA 1028066 36 100.0 30 .................................... TGATAAAACGCTTTTTGAACAAGGAAAGGT 1028132 36 100.0 30 .................................... CACACACCGAAGATGCAAAGTACCTCCGTC 1028198 36 100.0 30 .................................... GAGAACGACTGGCAGCGGCTCGCACAGTTC 1028264 36 100.0 29 .................................... TAACTACTATGATAGTGGCAACCTCATGC 1028329 36 100.0 29 .................................... CGTCCGCAACCATCCCAAAAACTATTCGG 1028394 36 100.0 29 .................................... TGGCCTTCGAGGCCTTCTCGGCCTGTGCG 1028459 36 100.0 29 .................................... CTTCGATTTCTCGTTGTTCAGATTGTACT 1028524 36 100.0 30 .................................... CCAACGTGGTAACCCTGACCTATTAGGATG 1028590 36 100.0 30 .................................... CAAGAGCACGAACGTCTGAAATGGTCGACA 1028656 36 100.0 30 .................................... TTTTCGTTCAATGCTACTTTGAACAAGTCG 1028722 36 100.0 29 .................................... GTGGCAGTGCTAACATTCCTAAAGTATTA 1028787 36 100.0 30 .................................... CGTAATAAGGGAAACGAGGAGTGCAAAATG 1028853 36 100.0 29 .................................... CTGGAGGCTATCTATAAGAGCGCCGACCC 1028918 36 100.0 30 .................................... CGTGATGAATTTACTTACAACGGGGTTTGG 1028984 36 100.0 30 .................................... GTTTGCCAAGCTATTAGGCGTCAGTCCTCA 1029050 36 100.0 30 .................................... TTTGGACTCTCTTTGCAATTCCCTAATATG 1029116 36 100.0 29 .................................... TCGATACTGAATCGACTACGACTCGCAAA 1029181 36 100.0 30 .................................... GGGCAGCGTCGACGTTGATGCTGTATGTGA 1029247 36 100.0 29 .................................... TTTATGTTTAATTCTTCTATTGATAGATA 1029312 36 100.0 30 .................................... TTTAATTTAAAAATAAAGAGCATAAATTGT 1029378 36 100.0 29 .................................... CCGCAATGAGGTCACCGGCAAAAAAACGA 1029443 36 100.0 29 .................................... GCTTTCCAGATGAAGAGTAACGGCAGTAG 1029508 36 100.0 29 .................................... ACTAATTGTTATATGCTTGCAAGTATCAA 1029573 36 100.0 30 .................................... AGTGTTCAGCACCATTGCGGTCACATCCTT 1029639 36 100.0 29 .................................... CAGAAATTCTTTCATTGCCGTTTGATTTA 1029704 36 100.0 30 .................................... GCGGCAGCCTTTCGGGGTTGGGCAGGGCGA 1029770 36 100.0 30 .................................... GCAGCGTCTTGTCCACCGCTCCATTGATAT 1029836 36 100.0 29 .................................... ATATTTATTGTGACCCGCATGGGGTAATG 1029901 36 100.0 30 .................................... TAGAAGGGGCGCAATATCTCCTTATCGCTG 1029967 36 100.0 29 .................................... TCGTAATGATACGAATGAACTACACCGAC 1030032 36 100.0 30 .................................... CAAGATGCCAAAGGCCCGACAATTCAAGCA 1030098 36 100.0 30 .................................... GATGGCATGCCGGGTCATCCACGCATCCAT 1030164 36 100.0 29 .................................... TCGCCGATAACGCCTATGCGCTGCTGTTC 1030229 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 57 36 100.0 30 GTTGCGGTTTGATGTAGGAATAGAACGATATACAAC # Left flank : AAATTCTATAAAGGTGAAACAAAAAAGCTTTCCTTGCCAGTTCTTATATGACTTTTAACCGACTTAATGCATATCATATCATGTGGCTGTTCGTATTCTTCGACTTGCCTGTGACTACAAAGAAAGAACGCCACGACGCAGCACTCTTCCGTAAGAACCTGGAGAAAGATGGCTTCTCCATGATGCAATTTTCTGTTTATATCAGGCATTGCGGTTCCTATGAGAGTATGGATGTTCACGTCAAAAGGGTAAAAAGCCTTATACCAAAATATGGGGCCGTAAGTATTCTCTCGGTTACAGACAAGCAATACAGTAATATATATAACTTCCGTGGAGTACCTAAAAATCAGAAACTAAAAAAAGAAATAAAACATATCAGCGAACCGATACAATTAGAACTTTTTTAGTATCTTTGCACTGGAAATAGACCTACACTTCCGTTTTTTTTATCTCTCCAATGGCCTTGAATCTCTTTATTTAAGGGCAATTTAGAGAATAAG # Right flank : CTCTGCACTGCCCAGTCACTCTATGAGCGAGTTGCGGTTTGATTAAAGAAACCTCCATTTGAGACACTATACAATTTGGCCCTTGCTTTGCCGTTTCTGGCTTAGCAAGGGCTTTCTTTCGTAGAAAGCCCGTTTAAACTTCCCCTTGTTTTAGTCTCTGCATAATTATTTTTGCCAATATTATTGGTAATTTCTTGCAGATATGGCCATTTATTTGTACCTTTGTATAGTTCTTTTAATTATATAGATACTATACATATTTATGGCTATTCCAGAAGAGATAAAGTCAGTCGCCCGCCCCAAAAGTACGATAGTCCGACAGAGAGGCAGTCGTTTTGTCGTCATAAAAAGGACGAGCAAAAGAATTAACGGGAAGCCTATCCCCGTAGACCAAGGAACGGTAGGAGAAATTGTAAACGGCAAGTTTGTCGAGGGCTCATATATGCGCAAGAAAAATCAAGTGGATATTAAAGATTATGGAGAGGTGGCTCTCTGTGACA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGGTTTGATGTAGGAATAGAACGATATACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.30,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 4 1035459-1035683 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPTX01000002.1 Prevotella sp. R5027 sequence02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ======================================= ================== 1035459 27 96.3 38 ......G.................... TGGAAATCAGATGTATTGAGTATTGTCCAGTTGCGGTT 1035524 27 100.0 39 ........................... GTACTTGCCGGTCTCACCCGCGGCCGTTACGTTGCGGTC 1035590 27 100.0 39 ........................... AACACCTGGCGCTCATCAATCAAGCTGTGGGTTGCGGTT 1035656 27 85.2 0 .................C...G.A..G | G [1035677] ========== ====== ====== ====== =========================== ======================================= ================== 4 27 95.4 39 TGATGTAGGAATAGAACGATATACAAC # Left flank : CTTTCCATTCACGCCCACATCCCGCAGCGCCAGTTCATAGGCGACTCGCAGGAACTCATTCAGAAACTCAACACGATTATCAATAACTCTTTAAAAACAATAAAAGATGGAATCATTACTCTTGCCAATCATTAATTACATTTCACAATCATTCCCCGAAATTCCTTACGTCGACGAGGACTACGGACAGCTCGAAGCCATCGACAACGAGAACATGGATAACTATCCCGTCGTATTCCCCTGCGTCCTCATCAATACGGATTCCGTCGACTGGTCGTCCCTTTCTGCAAAATCACAGAAAGGCAATGCGCACATCTGCGTCCGGCTCTGCATCGACTGTTATGCCGACACGCACTTCGGCTCTAACACTACAGATAAAATAAAGGAACGCGCCGACCTTGTCCACTCCCTCCACGCCGCGCTCCAGACCTACCGACCACTCGCCGTCGGCGCGCTCGTCAGAACCAAGTCAAAGTTCTACGCCTGGTTCCAGTTGCGGT # Right flank : GATAGGCGGCACTACTTTTGATAAGATAGGCTGCTCTCGGGAATGAAAAGAAAAACGATGTTTTTCTTTGTCATCCCACTCGTTTGTACTATCTTTGGGTAAGATAGGCTGCACCTCGGAAATAAAAATAAAACGCGTTTTATTTTGTATTTCCCTCGGTTTGCACTATCTTTGCAAAAAAAGAAAGGAATAATGAATGAAACCGATACTCAACGACTATCACAAGAAGATCAACGAGGTGAAACTCCAGTCCGTGGAATCCTGGAGCAAGCTGAAACTGTCGCACAAAGAGTGCTTAAATCAATTCAAGCGGTTGCGGGAACAACGGATTGCAAGAGAGTCCAAATCGCTCGCTTAACAGATTTTGCCAAGAATAACAAATGCTGGATAGATTCACCTGAATCACTTGGCGATTTTGCTGATAGAGGTTCGGAGAACGAAGTTTATCTATCCAAAGACAATGATGTTGTTTATAAACTGAATGACTTCCGTTATTCAGA # Questionable array : NO Score: 2.63 # Score Detail : 1:0, 2:0, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGATGTAGGAATAGAACGATATACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //