Array 1 1068-42 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QKUH01000006.1 Streptococcus agalactiae strain 8H3O NODE_6_length_77330_cov_51.2709, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
      1067	    36	 100.0	    30	....................................	TAATTGCCAATGCTTACAATATCTTCGTCA 	
      1001	    36	 100.0	    30	....................................	ATGTTCTGAATTACCTTTCTCGACACTCCG 	
       935	    36	 100.0	    30	....................................	ACCATCAAGGCTCTTATCTGCAGATTGTTA 	
       869	    36	 100.0	    30	....................................	AAATGGTTGCCAATGACTTTCTAGAGTGAT 	
       803	    36	 100.0	    30	....................................	ACAAAATCTTTTGTTGCTCCTGGACGTATT 	
       737	    36	 100.0	    30	....................................	ATGTAAGGTATTGTAAAACTTCTTCTTGCG 	
       671	    36	 100.0	    30	....................................	ACTGTTCCTATAATTAAAATAAAAGAGGTA 	
       605	    36	 100.0	    30	....................................	TGTTCCAGTAAAAAGTAATTTTAAAGCATT 	
       539	    36	 100.0	    30	....................................	CGCTCGATTGATGCTATCAACTATATTGAA 	
       473	    36	 100.0	    30	....................................	TTAAAAGATTTAAACTATCAAGCGTCAATT 	
       407	    36	 100.0	    30	....................................	TTCTAAATGCTGGTGACTGCTTTGCATAAA 	
       341	    36	 100.0	    31	....................................	TTGCTGCTAGACCCAAACAGTTTATTTTTAG	
       274	    36	 100.0	    30	....................................	TCCTTTTTTAGATAATGTGCGATCACGGAC 	
       208	    36	 100.0	    29	....................................	TTTTACCAATGCTTCCATATCGCTTATAT  	
       143	    36	 100.0	    30	....................................	TGGTTATACATTTACTAATCCATCAGCATT 	
        77	    36	 100.0	     0	....................................	|                              	
==========	======	======	======	====================================	===============================	==================
        16	    36	 100.0	    30	GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	                               	       

# Left flank :   CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTAAGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG
# Right flank :  CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:58.33%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-0.20,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [41.7-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.14   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//