Array 1 6305-7066 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNWK01000118.1 Streptomyces wedmorensis strain NRRL 3426 contig118.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 6305 29 100.0 32 ............................. CAGAAGGAGCACGTCAAGGCGCATCCGACCTG 6366 29 100.0 32 ............................. TCCGCGACGACGACCACGACAGAGATAGCCGT 6427 29 100.0 32 ............................. TGGCCATCGCGCGCGGGCTCCAGCGCACCGCT 6488 29 100.0 32 ............................. GACACCAACGTCCCGGGCGGGGACGTCGACTT 6549 29 100.0 32 ............................. AACCCGAAGAACACGCCCGGCATGTTCCGCCT 6610 29 100.0 32 ............................. AGGCGCACTACGGACAGCGCGTCGCACGCGTG 6671 29 100.0 33 ............................. GGGCACGACCTGGAGAGGTCACCCCCGACCAGT 6733 29 100.0 32 ............................. TGACGGCACTTCCGAGGGTATTTCAGCACACG 6794 29 100.0 32 ............................. CCGCCTGGTTGGATTTCCAACCCAGATTCCGG 6855 29 100.0 32 ............................. ACCTCCGGCCCCATCAGCCTCCACCGCAACGC 6916 29 100.0 32 ............................. CGCGGCGACGAGACCGTCAGCACGAACCCGCT 6977 29 100.0 32 ............................. GGCCCTGCCTCCTAACCTGGCAGGTGTCGAGT 7038 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 13 29 100.0 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : AACTGCACCGGGACGGCATGCTGACTGAGACCCTGGACGCGGCCTCCCACCCAGGGCCGGTAGAGCGCGTCGTCCGAGTCGACATGACCGCTCCACCGGTCCACCCAACCCGGATACCGCTCAGGGAACATCTCCCGCAGCCGCTTCTCGGCCGCCGGTAGCGTGGGACGCACCCACACACTCCCAGCCGTAGCCCGGCCGTTGAGACGCAGCCCACCACGCCTGGCCTTGCCCGGTTCTGGCACAACTTCCGTGAACCACGCCGACCGAACTCGTATCCGCCGTTGGACGAGCCGTTGACCTGCCGGTTCACCAGGGGCGTCGGCCTCGGGCATCGAGGATCGCTCCGGCTTCACGGAAGTCGTGCCAGAACCCGAAGTCGTGAACAAAGCCAACGCTGAGAAGCGTAGAGAGAAACGAGCACTTTGGGCTCTTTGCCGGTTTCGGCGAAAGTGGTTCAGCCGGGCCTGCGCATGCGGTAGAACTGCAGGTCACGAAGT # Right flank : TGGACCCGGATGAACGCGATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [40.0-13.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 567-108 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNWK01000103.1 Streptomyces wedmorensis strain NRRL 3426 contig103.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================================================ ================== 566 28 79.3 32 .......A...A.TC......-..G.... TGGCCGAGGTCACCCTCGGACCCAAGACCGAA 506 29 82.8 96 ........T.....C.G.......G...T GGTTGTGCGGGGGAGGGGGTGGTGAGCGGTTTGTCGGTTTCGGTGAAAGTGGTGTGGAACGGGTTGGGGGCGTCGTAAAATCGCAGGTCACGCAGT C [480] 380 29 100.0 32 ............................. AGCACGGCATCCGGCCCGTCCTCGGCATCGAC 319 29 100.0 32 ............................. AGGCCGAATTCCTGGCCTCCCTCATGAACGGC 258 29 100.0 32 ............................. GACGCCAGAGCCTCGCGGTATGGGTATCCCTG 197 29 100.0 32 ............................. CCCTTCAACAACGCCGCCGCCGCCAAGGTCCT 136 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================================================================================ ================== 7 29 94.6 43 CTGCTCCCCGCGCCTGCGGGGATGATCCC # Left flank : AGTCACTGCACAGTCCGAGGACCCCACCCACTGCTCCTTCTGCGGGAAGCCGGGCTCCGAGGTCGGCAAGCTGGTCTCGGGACCCGGTGTCTACATCTGCGGCGAGTGCGTGGCACTGGCGGAGCGGATCGTTGCCGGGACGATCGGGGAGCCTTCGGCGCAGGGTATCCGCGCCTGGGTCTCCATGACGGACGAAGAGATCTTGAATCATCTCCCTCGTGTCGCCGCGGAAATCGACCGAGCCGAGGCTGAGCTGCGCCTGTGGGTTCAGGAACTGCGGCGACGTGGGGTGACCTGGACGCGGATCGGCGAGACCTTCGGCATCACTCGTCAGTCTGCGTGGGAACGCTTCTCCGGCGAGGAGTGACAGGCGGAGGCCGGCGCAAAGCCACTGCTCTTTGTGTGTACGGGTCGAGTTGAGAGTTTTGACCGGTTTGGGGGTTTCGGTGAAAGTGGTGCGGAACAGATTTGGTGCACCGTAAAGCCGCAGGTCACACAGT # Right flank : CGCACCGGTACGTCTAGGCCGTGTTTTAGAACTCGCTGACCTGCCTGGTTGGCCGTCCGGGGAAGTCGCGGGCGGCCATCCAGATAGTCAGGTCGCGGGCGATGTCGT # Questionable array : NO Score: 5.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.73, 5:0, 6:0.25, 7:-0.95, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCTGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GAGTTCCCCGCGCCTGCGGGGATGATCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 3452-1960 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNWK01000103.1 Streptomyces wedmorensis strain NRRL 3426 contig103.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3451 29 100.0 32 ............................. AACGGCACCCCCATGCCGCTGAACGCGACGAA 3390 29 100.0 32 ............................. GTTGACGTCGCCCTGAAGGATCTCGGCCACGT 3329 29 100.0 32 ............................. AATCGGCGACCGCAGGAGCAAGCTAGCTGAAG 3268 29 100.0 32 ............................. GAGGACCGGACGCTCGGCGAGTTCATGTGGCT 3207 29 100.0 32 ............................. GCTACCTGGGACGTCCGCTCCACCCTCGAACT 3146 29 100.0 32 ............................. GATCACTGGTGGTTCCGTTCGCGGGGTGGCCA 3085 29 100.0 32 ............................. GGTTCGAGTCCAACCCCGTGGTCGGCTACGGC 3024 29 100.0 32 ............................. TCACAGGACGCAGCGACATGAAAGCGCCTCTC 2963 29 100.0 32 ............................. CAGCCTCGGCCAGCGCCGTCCGTAACGCAACG 2902 29 100.0 32 ............................. TCGGCGAGAAGGGCAAGCGGGCCCTGGCGTCG 2841 29 100.0 32 ............................. GAGCGGAGCGAGTTGGGCGTGGCCCCCGGTGA 2780 29 100.0 32 ............................. TACCAGATCCTCCAACACAAGATCACGAAGAA 2719 29 100.0 32 ............................. CACAAGGCTCAAGATCTTGATTCGCATGCCCG 2658 29 100.0 32 ............................. CACATCGTGGTGCCGTCCACGTACAGCCGGTA 2597 29 100.0 32 ............................. CGCGAGTCGTACTCGACGCGGTTCAGTTCGAG 2536 29 96.6 32 ..........................T.. GCGAAAGGGCCGCCCGGATGCGACCCGGACGG 2475 29 100.0 32 ............................. GCGACCGGCAGGTACCACTCCAGCTCCACCGC 2414 29 100.0 32 ............................. TACGACACCGAGTTCCGCGAGGACGACGCCGA 2353 29 100.0 32 ............................. TCCCCGGTGCCTGATAGGCGAGGATCGCGGAC 2292 29 100.0 32 ............................. AACGCAGACGCCCCGGGCAAACTGCGGGTCCG 2231 29 100.0 31 ............................. CAGGGTCAAGGCGTTCGACAAACCCGCCCAG 2171 29 100.0 32 ............................. GGCAAGTCGGGCCTGCTGAACGTCCTGGCCGG 2110 29 100.0 32 ............................. GTCACGTCCTCAGGCGTGGCCCACGGGAAGTG 2049 29 89.7 32 .......T...T...C............. TCGGTCCAAGGACAGATCGACAAGGAGGCCGA 1988 29 93.1 0 .......T..T.................. | ========== ====== ====== ====== ============================= ================================ ================== 25 29 99.2 32 CTGCTCCCCGCACGCGCGGGGATGGTCCC # Left flank : GCTCGCCCACACGACCAACAACGAGCAGGGATACACCTTCCGCACCTTCGACCACGCCTGGAACCCCGTCGACCACGAGGGCCTGACCCTCATCCACCGCCCCACAGAAGGCGGCGCCGGTTCTGGGCCGGCGAGCAGCACACAGGGCAAGCCCGGTTGGAGCAACGCCTCCAAGCGACGCAGATTCGGACGCAGGTAAGCACTCACAGAGGGGCACAGACTGCGCCCGCTCCAGCAGGGACGGCCCCGCCCCGAAGTTCAACCTCACCTGGTACATCAATCGCTCTAGCTCCCGCGGGGCTGTCAGGAGGTGTCGAGGCACGCCTGCCGATCGGTAGGGGAGAGGTGCGGACCAGGCGAGTGAAGGTTCTGTTGATGCGTTCTGCGCTCGTGCCTGTGAGGTTGGGGCCAGGTGAGGGTGGGTTATGTCTGGTTTATTCGTTTCGGTGAAAGTGGTTCCGGCGGGGGTGCTCGTGCGGTAAAACAGCAGGTCATCCAGA # Right flank : AACCTGGCCACACAGGTTCACATCCTGTCCCCCCGCTACTTGGCCGGCGCTGCATTCGGAGACTTCTTCACGTCACGGCGCGCCGACACGCTCTGAAAACCCGTAGGGCCCCGACCGGGGGAGTGGCCGGGGCCCTACGGGATGTGGGGTGTGGGGTGGCTTAATGCCGGAAGGTGTCCTTGATGTCTTCCTTGGCCTGGCGTGCGTGGCCCTTGGTCTGGTCGGCGCGGCCTTCGGCGGCCATGCGCTCGTTGCCGACGGCGCGGCCTACGGTCTCCTTGACCTTGCCCTTGGCCTGCTCGGTATGGGCCTTGCTCTTCTCCGTGCCCGACATCGGGACCTCCTCGTGAAGCAACCGGATTGGTCTTGCCCCCCGCCTACTCGCCCCCGCCCGTCCTAAACACTCGCCACCGGCATGACTCACTTCTCCGTCCGGCTCCAAGCACACTGCTGACAGCGGAGCGTGCCCCCGCGGCCGCGGCCCTGACGCCGGCAGCTCG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACGCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 4756-3084 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNWK01000126.1 Streptomyces wedmorensis strain NRRL 3426 contig126.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================================================ ================== 4755 29 100.0 32 ............................. CGGGCATGGTGCGTCGCCGGCGTCGACGACCA 4694 29 100.0 32 ............................. GCCAACTCGTGGTGGCTGAAGGAGAAGGGACA 4633 29 100.0 32 ............................. CACCCTCCGCACTCTAGGAAGAAGCCGCACAT 4572 29 100.0 32 ............................. TACCTGGCCCAGCCGGGGTTCGAGGTGTCGGA 4511 29 100.0 32 ............................. CGGCGGTGGCCTCAGCCCACCGGGTCACCTCA 4450 29 100.0 32 ............................. GCCTGGTCCTGCTCCTGGTACCGGGGGATGGA 4389 29 96.6 32 ............................A GGGAAGCCGGGGTACGGACGGCTGCTCCGCAA 4328 29 100.0 32 ............................. GACCCTGCCGGATGGCGCGCCATCGAGGGCTA 4267 29 89.7 32 ..........T.....T...........T CGGGCTTGTGCCCATGCCTGGGCTTCTTGGAA 4206 29 82.8 31 ...........T.GC.........GC... GCGGCACCACGGTCATCCAGACCGCCGGCAA 4146 28 82.8 32 ...T.T.....A..-.........G.... GACGAGCACTCCGTCGCACAGCGGTACTTGAT 4086 29 82.8 32 ..A.....T.....C.........GC... CGGGACCAGGCCCGCCTGGAGGCCGCCGTGTT 4025 29 89.7 32 .............GA.........C.... GGGCTGCGTGAAGTCGCCCTCGGCATCGAACC 3964 29 75.9 32 ..A....T...T.GC.........GC... ACGGCCGTGACCGCCCCGATCGCGATCGCGTT 3903 29 82.8 32 ...........A.GC....A....G.... CAGGAATCGGCAAGCTGGAAGGGCACGCCGTC 3842 29 86.2 32 ...........A..C..A......G.... TGGAACCTGTCGGTCGACCTGCGCGCCACGGG 3781 28 86.2 32 T..........A..-.........G.... GCGTGCTGAACCGGCGACGCGTCTCCCACGAG 3721 29 86.2 32 ...........T.GC.........T.... TCGAAGAACTCATGCCGCAGGAACCGGGCGGT 3660 29 89.7 32 .............GC.........G.... TCGCCGAGCGTCCGGTCCTCGTTGGTGCGGAA 3599 29 86.2 92 ...........A.GC.........G.... GACGCGCTGCGGATCCTCCTCCGGCGCGGCGCGCGGCCCCTCCCCCGCACGCTGGGGCCGCTGGACGACCGGATCGCCGAGCACCGCGCCGA 3478 29 82.8 32 ......T....A.GC.........G.... CAGCCGAGTGCCCACGTACTCCTCCAGGCGCG 3417 29 86.2 32 ...........A.GC.........G.... CGTCTCCAACCAGCTCTTTCGGCGCCTTGATG 3356 29 86.2 32 ...........A.GC.........G.... GGCTGGCGGAAGACCTGCCGGGCGTCGCGAAT 3295 29 86.2 32 ...........A.GC.........G.... GCGCCGGCTAAGAGGTGCCGCCCCAACGGGGC 3234 29 86.2 32 ...........A.GG.........G.... GAAGAACTCGACATAGGCCAGTGCGGGCAACG 3173 29 82.8 32 ......T....A.GC.........G.... ATGTTGGCGTTCGGCAGGGTGGCCGCAGTGAA 3112 29 89.7 0 .................T......GC... | ========== ====== ====== ====== ============================= ============================================================================================ ================== 27 29 89.5 34 CTGCTCCCCGCGCCTGCGGGGATGATCCC # Left flank : AGCACGGCCCACTGCTCGTCAGAAAGATCCCCTCGCCCCACACCGCGATCATCACGGCACAGGGCGAGCGGCGAAACCTACTTCCAAAACACGCCCTAGGGGAGGGAGTCTGCC # Right flank : TCGGCGTTGCCGTTCGCGCTCGTCGTCTTTCCGGATTGTGTCTGCCCGGCTGCGTATCTTGCCGGGGCGTGGGGCCGTTCATGTGCGCCTGGTCCTGGGGCGAGTTCTCTGTCCTGTGATGGACGGCGCCTGCGGGTGCTGCCCGCCGGTTGGAGCACCGGGTGCGGGGCTGGTGCCTCACCACCTGTCTTGCCCGGGTCGGGGTCTTCCTGTGCGTTCCGTTCGTGCGGAAGGAGTCGGACGGCGCCGGTGTTGTCGGTCCCTGGTGTTAGCGTCGCCGTCATGGCGAACCGTTCATATCTCTATTCCGCGGACTCTATGCCGAACGAGGCGGGGATCCCTCAGCAGATCCGGTGCATATCGGAGCACAACTGGGACATCCCGCTTGCGCATAAGCTCATGGTGGGACGCGGAACGACGATGGTCCCGTCCATGATCTGGAACCCTCCGATCGGCATCGCCGCGGACTACGCCGAGGGGGCGGCTCTGCTCCGCGACCT # Questionable array : NO Score: 4.90 # Score Detail : 1:0, 2:3, 3:0, 4:0.47, 5:0, 6:0.25, 7:-0.17, 8:1, 9:0.35, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCCTGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GAGTTCCCCGCGCCTGCGGGGATGATCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [24-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 19698-19930 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNWK01000033.1 Streptomyces wedmorensis strain NRRL 3426 contig33.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= =============================================== ================== 19698 25 100.0 44 ......................... CGACCCACCCCCGCGTGAGCACGGGACGGCACCCGGCCCCCCAC 19767 25 100.0 47 ......................... GACCCACCCACCGCGTGAGCCCACGGGACGGCACCCGACCCACCCAC 19839 25 96.0 42 ......................T.. CGGCCCACCCGCCGTGTGGGCAATCGTCCCGCTGGGGCGGGA 19906 25 92.0 0 ..G..................G... | ========== ====== ====== ====== ========================= =============================================== ================== 4 25 97.0 45 CGTGTGGGCACACGGGACGGCACCC # Left flank : AGGGCGGGAACCGTCGGCCGCCGTCATCCTCCGGGCGGCCGCCAAGCTGCTCTCGCCCGTCACCTCGAGTGTCGTCGCGCGATCCGTGTCCGGCGTGACCACGACCGGGCCGGGGCCGTGAAGGCGGGTTCCGGACAAGGCGGCGGCCAGGTCTTCCGCGAGGGAGACGGTCCGGCCGTCCGGGGCCCTGTACCGGCCCTCGGCCACGATCTCCTCGGTGTGCCGCGCGATCGCGCGCAGTCGTGCGCTCATGGCCCCCAGCGTGATCGTTTCGCCTCCCCCACGGCAACGGAATTTCCCGGACCGCCCCACCCTCCGGCCGGCCGCGCCCGCCCTCGGACGGGCCGCGTCCCTTGGCCCCGCGCCCCGAAGGGCTGCGCCCCTTGCCCCGCACCCGTACGCGCCGCCGTGCGGGCCCGTCGCCCTCTGCCGTACGGCCTTCGCCCGCTGCCGTGTGGGCCTGCGCCCCGCCCCGTGCGGGCCTTCGCCCGCCGCACCCC # Right flank : CTCGGCGGCGCCTCCGCCCCTGTTGCCTTGGCCCGCACCCATTGCTCGGTGCGCACCGGGTGCGGGTTCGTAACGCGGGGCGAGGCGCGGCGGAGGGGTGGCCCGTGGCGCGGGGGTGGCTGGGGAGGTGGTCTTGCGTGGGGGTCGGGGGTGGCTTTAGGTGGAAGCAGCGACTTCCGGGGGCGTGGCCCCATGACGAGGAGGTGCAGGGATGGCGTCGAGCGGCATACCGCGTGGCGGGCCCCCTCTTGGTGAAGGGGAGGCGGAGGACCTGCTGCGATGTATCTGCTTCAAGACGGGCCCGCCCCGGACGGTGGGGGCGGAGCTGGAGTGGCTGGTGCACGACCTGCGGGACGCGCGGACACCCGTACGGCCGCCGAGGCTGGCGGCGGCCGTCGACACGGTGCGGTCACTGCCGCTGGTGTCGGCGCTGACGTTCGAACCCGGCGGGCAGCTGGAGCTCAGCTCGCACCCGGCCGGTTCTCTCATGGAGTGTCTCG # Questionable array : NO Score: 2.51 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGTGTGGGCACACGGGACGGCACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [15.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //