Array 1 122457-120329 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJZG01000010.1 Chimaeribacter arupi strain 2016-Iso5 NODE_10_length_144418_cov_29.9357_ID_6200, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 122456 28 100.0 32 ............................ TGATGGGCGCGGAATCTCCCGCACCGGTGCAG 122396 28 100.0 32 ............................ GGAGTCCCAGCACCAGCGGCTGACGGACATCT 122336 28 100.0 32 ............................ CATTCCCAGGACCCTGTCGGGGTAGGGTACGC 122276 28 96.4 32 ...........T................ TGGACGCAGTGTTTGCGGCGGGCCACAACATT 122216 28 100.0 32 ............................ GACAGCGATTTGGTTAACGCCATCGTTGATGC 122156 28 100.0 32 ............................ AGAGCGAAGTTTTCCAGACGGCCAGCGGGCAA 122096 28 100.0 32 ............................ TCCAGCTTGTCGAGAATGCCGATCACCAGATC 122036 28 100.0 32 ............................ TGGTAATCGCCGCCTGCCGCGTCCAGGGTGCG 121976 28 100.0 32 ............................ AATAGCCACACCAAACCCAGTTAGTGCCACCA 121916 28 100.0 32 ............................ AAACTGCCGCTGAACGTATGGCAGAGGATGCA 121856 28 100.0 33 ............................ AGACAAGAAAAGCAATCCGTGCAGTTGGTTTTT 121795 28 100.0 32 ............................ AGGCAGGCTGGCGCGGGGCCAGATACCCAGAA 121735 28 100.0 32 ............................ AAATAATGTGGTTGAGCACGTTCATCCGGTTA 121675 28 100.0 32 ............................ CAGCCAGCGCTGAATAAATACTCATTGATCCT 121615 28 100.0 32 ............................ CGGAGAGCGCGGGTGACGACCATTTGCGCCTG 121555 28 100.0 32 ............................ TGGGAACCCAGACAGCGCCCCGCTGCCGGGTC 121495 28 100.0 32 ............................ TATCTGGCGCCCGGAACCGCCGGGTCGGTATC 121435 28 100.0 32 ............................ GCTGATAGTGAATGTCGCGCCGGTAGCGACCT 121375 28 100.0 32 ............................ TGTCAAAATACATGGTTTCGCGGGTTACACCG 121315 28 100.0 32 ............................ GATGGCACTGAGGCCATGACGAACGTCCGGTT 121255 28 100.0 32 ............................ AAACTGAAGCCGGGCGGCATGGCCGTGATTAC 121195 28 100.0 32 ............................ TGTAGCATCTCGGCAAAATCGCCGTCGCTCAT 121135 28 100.0 32 ............................ TAACGCCGGCGAGGTGGACGCGGTATCCGCCA 121075 28 100.0 32 ............................ TGATCCGTTTGCCGCTCGATCGCGCCCGCAGC 121015 28 96.4 32 ...........T................ AGTTACTACTCCCTCCGCTATGAGGCTCCCTG 120955 28 96.4 32 ...........T................ AGAACTATCACCCGGACTGGCTGACCGTCACC 120895 28 100.0 32 ............................ TGTAGGGCGTACGTCTACCAGCCATTCTTTGT 120835 28 100.0 32 ............................ TGGAGGCTGTCTGTTTGCTCGTTTTTCCGCTT 120775 28 96.4 32 ...........T................ TTAGCATAACTTAGCAACCTTGCGGCCCCACT 120715 28 100.0 32 ............................ GGTCGCAGGCGGACGTAGACAAATACGGGCTG 120655 28 96.4 32 ...........T................ TCAACACGCTGGAACCGGGCGCGGAAAATGAT 120595 28 96.4 32 ...........T................ TCGATGACCCCCGGCAAATACTTCTTGCGCAG 120535 28 96.4 32 ...........T................ TGGGAACATGGCTAAGGCCAGCTCATGCAACC 120475 28 100.0 32 ............................ GCCCGGTACCCACTGCCCGGCTATTTCGGCCG 120415 28 100.0 32 ............................ GTAACGTCCCCGATAAATTTGCCTGTGGATCT 120355 27 96.4 0 ........................-... | ========== ====== ====== ====== ============================ ================================= ================== 36 28 99.2 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGCATTGCATACGCTGGAGTCTTTGCACTGGCGTACCGGCCTTAGCGATTACTGCGCTGTTTCAGCGATCACACAGGTCAGCGGGATCAAAGGGTGGCGCACGGTAAGCCGGGTGCAGGTGAAAAGCAGTGCCGGGCGCTTATTGCGGCGCTCAGTGAAGAAAGGCTGGATCAGTGAAGCAGAGGCGACACAGCGGCTTGAAAACAGTCAGGAACAGCGAAGCGACTTGCCCTGGCTGGCCGTAAAAAGCCTTTCCAGCGGTCACCACTTCCGGCTGTTTATCCTCCACGGTGAACTTCAGCCCGCCGCCACCGCAGGGGAGTTTAGCTGTTATGGCCTGAGTAACACCGCCACCATCCCCTGGTTCTGACCCTTTTATTTCCGCCAAGGATAAGTTGTTGATTTATTGAGACCTAAATATGAGGTAAGAAAAAAGGGGTAAGGAAGAGAATTAAAAGGATTTTTACGCAATAACAAAACGTTACGAAGCTGGCTGACCA # Right flank : GGCTGGAGACAGTTTGATGAAGAGTCCGGACGCAGAAAAGCAAAAACCCAGCCATTGGCTGGGTTTTCTGAATAAGTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTATTGGCTGAAGGCCGTCAACGGCTTTATGCAGAATTCTCCCTGAAACCGGGCTGACTGCTCTCTTTTCAGGCAAAAAGCCACAGGGCAGCAGCAAAAACTGCCCCTGACAGGCAATGTTTATCAGGTCAGCGCACCATGTTTACGGCAGCGTGCGACCTGCAAAACATCCTCAGCCAGCCGTAATGCGACTTCCACATCATGGGGCTGCCGTTTTACCAGCAATTTGCTCAGGCACCCTTCCAGAATCAGCTCCATCTGCTCGGCCACCATCGGCGCATCGTCTGCGTCCATGTCCTGCAACAGCGCCAGCGTATAGTCATAAGAGGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 17200-16419 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJZG01000026.1 Chimaeribacter arupi strain 2016-Iso5 NODE_26_length_61128_cov_28.3608_ID_6214, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================================== ================== 17199 29 100.0 33 ............................. GACACTATGCACAAACTACACACCCTTCTCCGC 17137 29 100.0 32 ............................. ACCAGCTCCTTGCCCTGCTTCTTCACGATGAT 17076 29 100.0 32 ............................. CGTGTGCAGATCTGGATATTCATATTGGCCAA 17015 29 100.0 32 ............................. CACGAGTCGCCGGGTGACACTCTGCCTGATAT 16954 29 100.0 32 ............................. GACGTGGCCTGGATTACGTGACCGAGCAATTG 16893 29 100.0 32 ............................. GGTGTGAAGGTCGTCTCTGATGCGCCTAATTC 16832 29 100.0 32 ............................. AAGTCCATAGGCGTAAATGGGGATGGCGATGA 16771 29 100.0 32 ............................. TCAATAGGGGAGGGGATATATTTGAATATGTA 16710 29 100.0 32 ............................. ACGCTGTTAAAACCAACCTGGGAGATAAAGCC 16649 29 100.0 32 ............................. CGATAGCAGCATTCATTGCCATCAAATCGGCG 16588 29 100.0 51 ............................. GGAGAGCGGGGCTAAACCGGGAGAGCGACCCGGAAAAATACGAGGAGTATA 16508 29 100.0 32 ............................. AGCTGATCGAGACATTCATTGTTCGTCAGTCT 16447 29 69.0 0 ...........TTTC......A...CTTC | ========== ====== ====== ====== ============================= =================================================== ================== 13 29 97.6 34 GTGTTCCCCGCGAGAGCGGGGCTAAACCG # Left flank : AGCGTTCCGGCGGTGATCGCCGTGAGCCGTGAGCCGCTGATTGTCTACTCCGCGATGATGTTCGCCATCCTCGGCCTGCGCGCGCTCTACTTTGTGCTGGAAGCGTTGCGCCGCTATCTGTCGCACCTGGAGAAAGCGGTAGTGGTGTTACTGTTCTTTATCGCCTTCAAACTCGGCCTGAACGCCAGCGACCACCTCTGGCACCACGGTTACGAGATCGGCATCAACACCAGCCTCTATATCGTACTGATTGTGCTGGGCCTCGGCATCCTCGCCAGCGTGCTGTTCCCTGCTAAAGAGAAGTAATTCTCTCAGCAATCCTGAAAAAACCCCGGCTTGCCGGGGTTTTTCTTTTTCCGGCTGGTGAATACCATAAAACGCATTCTGAATTTTATAACGTTCTGAAGAATCAATGATTTATATCGCATAATCATCGTAAAAAAATCGGTAGAATTTTAGCTGTTTAAAAAAGTTTTTATAATCAAAGAAATACGGTAAGA # Right flank : TCGCCTTCAGGCGAAGGCGAGTCTGTGTAAATGGCTGACATCGGTTAGCTGTCTGGCGATAAACAGGCTGTACGTGGCCTGAATTTTTAGCCAGGTTTCCGGCGTGCTGCCAATTACGGCGGAAAGCTTAAGGGCCATTTCTGGCGTGACGGCAGTATGTCCGGAAATTAACCGGCTGGCCGTTGAGGGCGCGATCTCCATCGCTTTAGCAAATTGACGGAGGCTGACATTCATATCTTCCAGCGCTTCAGCAATGATTTCGCCAGGATGGGCGGGGTTAGCCATTCGCATTAGTGGTAATCCTCCAGGTTAAGAATTTCAGCATCACCATTGGCAAATTTAAACGTGATGCGCCAGTTGCCGGAGACACTGATCGACCAAATATCTTTGCGATCTCCTTTAAGCGGGTGCAGGTCATACCCCGGCATATCAACTGCGTCTATACGGTCAGCGGCATCAATCACCGTAAGGCGTGTTTTAATCCGGTTAACCAGCTTTTG # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGAGAGCGGGGCTAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGAGAGCGGGGATAAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-12.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //