Array 1 1658-111 **** Predicted by CRISPRDetect 2.4 *** >NZ_VOWW01000026.1 Campylobacter fetus subsp. fetus strain D0052 NODE_8_length_47535_cov_58.3907_ID_15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1657 30 100.0 37 .............................. TAAATAAAGCTAGCGAGCAATTATTAGGCAGCGACAG 1590 30 100.0 36 .............................. AGAGAAGCAAGGCTTAAAACCGTTCGCAGATGGCGG 1524 30 100.0 36 .............................. ACGACTTAGTGCTGTACATTCAAATACAAATAATTT 1458 30 100.0 36 .............................. TAACGCATGATGAATTTATAGGTAAGCAAAAATACA 1392 30 100.0 36 .............................. TAACGCATGATGAATTTATAGGTAAGCAAAAATACA 1326 30 100.0 36 .............................. TCGAATAAGTTGTTAAGATTATGCAACTTTTTTGTA 1260 30 100.0 35 .............................. ATGCAAGTAGAGTTGTTATCTTTGATAATGCGCTC 1195 30 100.0 36 .............................. TAAACTATTTCGTTATCCTGGTTGATACCGCTTAAA 1129 30 100.0 36 .............................. CATTTTATGGCAGTAGTATAATCTGCATTAAACTTA 1063 30 100.0 36 .............................. CTTGATACTTTTTGCTTGATTAGCTTTGCATTTTTA 997 30 100.0 36 .............................. TCCCCGTTATCTACCTCTGGCGCCATGCTCTCTCCG 931 30 100.0 35 .............................. CCTTCTGCGATATATTTGATGAAAAAACAGAAAGG 866 30 100.0 36 .............................. TTTGAAGTGCACGACGCTATAACTAGAACACGGATC 800 30 100.0 36 .............................. ATTAAAGCCGAATTACTCCCATTTTTTTTGACTTGG 734 30 100.0 36 .............................. TACATCTTTTATCTCCTCTTTGTATTCCTTTAGCTC 668 30 100.0 36 .............................. TCACCAAAAAAACCAGGAATTAAATAAAAAGTAAAA 602 30 100.0 36 .............................. GAATTTAATCGGAGTTTACAGGCCGGATCTAATTTC 536 30 100.0 36 .............................. TCACCAAAAAAACCAGGAATTAAATAAAAAGTAAAA 470 30 100.0 36 .............................. TAGCTAGAAAATGTAAAATGCTCCCATCCTTCTACC 404 30 100.0 36 .............................. AGAACTGTTTTAACCTCACTTCCATCAATCTCTTTT 338 30 96.7 36 .........................T.... CAGTATGCCATTTGATTCTAGTTCGCCTATAGCTCT 272 30 100.0 36 .............................. CGTTTTATTTCCTTGGAAAGCAAGGTATAAGCGTAG 206 30 100.0 36 .............................. CATCCTCCTTTTAATTTATTACATTTAAACAATTTA 140 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 24 30 99.9 36 GTTTGCTAATGACAATGTTTGTGTTGAAAC # Left flank : AATATAATTTTTTGTATAATCCAACTTCTATTTTATAGTTATTTATTACTCTAAGCCTAAATGGTGAAATTGGTAGACACGCTAGACTCAAAATCTGGTACGGGAAACCGTGTGTCGGTTCGAGTCCGACTTTGGGCACCAGGGGTTTTGTATATAACCCAACTCAATTTTAATGTTAGTTTTAATTTATAGCAATAATAATATTTATATACCACTAACTACAAATTTATATTTTATACTGCATTAAGCTTTTTCCAACCTAATTTTAGTTAAACTTTTAAAAACATAGATAAATAGTTTAAATTTAATGTTCCTATGATATTTAACTTATTATTGTTATTTTTTTAATTTAGATTGGAAAATAAATTTATTCTCATTATTTATAGCTATATTATATATATAACAAATAATCTATTTTTAATAGTTTTAGATAATATCTTTTAATTTATTTTTTATCTTAATTGCTTTTTTAAATTTACTTAGATGATGAGTTTATTATA # Right flank : CAAGAGCAAACATGGCAGAGACCTTAAAAGAGAAGTTTAAAGGCGTACTAAGTGCAAATACTAGCTATTTTGAAGGAGTGAGTGACCACATTATAAGTCAGGCTCAAAACA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCTAATGACAATGTTTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //