Array 1 2875-1556 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDOP01000042.1 Staphylococcus haemolyticus strain DE0553 NODE_42_length_14341_cov_102.568777, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 2874 36 100.0 36 .................................... ACTTCTCTCGCCATTTCTGCTAATTGTTCTACTTTG 2802 36 100.0 34 .................................... ACTAGATACCCAGAACAAAATAGGTCTAACGAAA 2732 36 100.0 36 .................................... TCTATAAGTTCATTAATTCCGATACCTAGATTATCT 2660 36 100.0 34 .................................... TTTTTTCCACCCTTTCAGATCATCTATGATCTTG 2590 36 100.0 34 .................................... AATTTTCTAATTCTATAAGTTCATTAATTCCGAT 2520 36 100.0 36 .................................... TATACTATTTACATAATTTTTTATGTGTCTGTCTAC 2448 36 100.0 34 .................................... TAGAATGTTATTATCTAAGTGGTCGATGTATTCC 2378 36 100.0 37 .................................... TCATACTAGCACCCCACTCTCTACTGAACAAGTATCA 2305 36 100.0 35 .................................... CTTAAAATCTAATTGCATTGTTATCAATTCCTTTA 2234 36 100.0 38 .................................... TCTGTAATGTATTCATTTAATGTAATCATAATTTTTTC 2160 36 100.0 37 .................................... TAGACCATTTACCTCATTATATTTATAGTCTTTATTA 2087 36 100.0 35 .................................... TTTTCTTTAACTGTTTTTACTGCCCATTTAATAGT 2016 36 100.0 35 .................................... ATAAACCCGTTCAATTCGTTATCTTTAAATTCTTG 1945 36 100.0 36 .................................... ACAACTTCGTCATCTTTCATCATTTCTCTTACATCA 1873 36 100.0 36 .................................... ATATTTCTTCCATGAATAACACCCTCCTTTTTTCTA 1801 36 100.0 35 .................................... AAGTTAACGGCATTACCTAATAAAAATATTTTAGG 1730 36 97.2 33 ...................................C TCATCTTTCATGTCACTGATTAATTCATTTGTA 1661 36 97.2 35 ...................................C GGTAATAGTTGCTCAATAGGTAATAAAACGTCGGT 1590 35 91.7 0 ............T.................-...G. | ========== ====== ====== ====== ==================================== ====================================== ================== 19 36 99.3 35 GATCGATAACTACCCCGAATAACAGGGGACGAGAAT # Left flank : TCCCTTGAGTAATCGATTTAATAATTCTACCGCCACATTTTTCTGTTTCAATCCTTCTACATCTTTTAAAAAGTCATCAGATAGGATTGATAAATCGGGTTGTTCAAGACCTAAAGTTTAATAAATGTCAAGTCAATGAAATCTTCAGTTAATAGTGTATATTTGATTATTATTAGTTTAAATATATTAAAATTAAATACTTATTATATATGGTTCTTTACTATTTTAGAAGTATATTTTTTATTTTCCTGAACAGTAGTTATTAAATTTATCTCTTATTTTAAATTAGAAAGGAAGAAAAAGTTAAATTTATATTAAGTTTTATATATGATTAATTATTAACGTATTAAATGTAGTATACTCTTAATATATAGAAAATTATCATAATATTTGTCAAAAAAAGTGACATTTCATATAGTAGCATGGTGTTAGTTGTCACAGTTTTTGACAGCCAAAATAACACTTGAACCTTTGTGGTTATGCTATTTATTAAAGTATCT # Right flank : GTAAATTTAATTACACTCTAAAATTTGTAAATTTTTAATGGAATACGCATTGATTAATTTTTAGGGGATGAAAAATGAAAGATGTTATTTATGTAGAAAATCATTACTTTGTTACCGTGAAAGAAAATAGTATTAAATTTAGAAATGTAATAGATAAAAGTGAGAAATTTTATTTGTTTGAAGAAATAGAAGCGATTATTTTTGATCATTATAAAAGCTATTTTTCTCATAAATTAGTAATTAAATGTATAGAAAATGATATCGCTATTATTTTTTGTGATAAAAAGCACTCTCCATTAACGCAACTTATTTCTTCTTATGGTATGACTCATCGTCTTCAAAGGATTCAAAGTCAGTTTCAATTATCTGGGAGAACTAGAGATAGAATTTGGAAAAAGATTGTTGTAAATAAAATTATTAATCAATCAAAATGTTTAGAAAACAATTTACATAATGAGAATGTGAAGTTATTAGTAAACTTAGCAAAAGATGTTAGTTCT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATCGATAACTACCCCGAATAACAGGGGACGAGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.00,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //