Array 1 36141-33873 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEHNU010000003.1 Ligilactobacillus salivarius strain T3 NODE_3_length_77739_cov_30.116480, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================================================================== ================== 36140 36 100.0 30 .................................... ACATTGGTATTTTAGATGAATATGCAGCAA 36074 36 100.0 30 .................................... ATATCGGAAGTCGCATGATGGAAGTTACTG 36008 36 100.0 30 .................................... GAATTTTAGAAAAGTAGCTCAGAAGCGAGC 35942 36 100.0 30 .................................... CAATTATCAGAAGTTCCAACAGGAGCAAAT 35876 36 100.0 30 .................................... GTGGAGGTATAGCGAGTTTTATAGCACTTA 35810 36 100.0 30 .................................... GAAAACCAGAAAACAAAAAACATTAGATCA 35744 36 100.0 30 .................................... GTTAGACTAAAACTGTTTGTAGTATCGATA 35678 36 100.0 30 .................................... ATAAAGATATCGTTCATCATCTGGGAAACT 35612 36 100.0 30 .................................... AAAGTTCAACAAAATTTCGGTCAAGAAATG 35546 36 100.0 30 .................................... AACGTAAGAAGTTAGTTGATATTGATGTAC 35480 36 100.0 30 .................................... AGTATACGTTGTATGGCTCAATAGAACATT 35414 36 100.0 30 .................................... TTTGGTATGTTAAAGAATGCTAACAGTTGG 35348 36 100.0 30 .................................... AAGCATTTTAGCTCCATGTCTAATCAACCA 35282 36 100.0 30 .................................... TTTCCTTTTAATATAATTCATCCGATTTGT 35216 36 100.0 30 .................................... GTACAACAGTTGGTAAATTCCTACATGATA 35150 36 100.0 30 .................................... TTTTTTCGATATGCTCTTTTGAATTTTTCG 35084 36 100.0 30 .................................... AAATTGAATTGATAAATTGAGCGTCGTTGT 35018 36 100.0 30 .................................... TTAACGAGAAACAAGCGATGATAGATGATT 34952 36 100.0 30 .................................... GAGAAATGGCTACCAAACAGGGGTGTCTAC 34886 36 100.0 30 .................................... TAGCTAAAAAGACAGTGTATAACAGAGCTG 34820 36 100.0 30 .................................... TTTCTTCGTTATATTTGTGCTTGTAAGCAT 34754 36 100.0 30 .................................... TTTATGAAAATTTTAGACGTATGTTGTGGA 34688 36 100.0 30 .................................... CTGGAATCATTTCCGAATTACCGTCAGTGT 34622 36 100.0 30 .................................... GGATCTCACTAGAACATTTTAAGAAACCAT 34556 36 100.0 30 .................................... TCTAAAACAAGCAGTAACATTGTTTGATCG 34490 36 100.0 30 .................................... ACAAACGAAACGACAAATGCGGGAACTGTG 34424 36 100.0 30 .................................... TAAGGAAGTTTCTTGAATATGCTGAGAAAC 34358 36 100.0 30 .................................... TTTGATTTTATAAATTTGGGTATCATTCCT 34292 36 100.0 30 .................................... TGAATGGTTATGAACATTTAAAGGAAATTT 34226 36 100.0 30 .................................... CTAGCTCCTCAATATCTACTTTTTTAGCAT 34160 36 100.0 30 .................................... TTTCCAAGTCTTTTAAGTGTCGTTTACATG 34094 36 100.0 30 .................................... TTGTTTCCATGACTCTAGTTTTGTTTTGTT 34028 36 94.4 84 ..........T.......................T. TACTTTCTTTTATGATATAATTTAGGCGTAATTTCAGAAGTATATTAAAGATCTTTAGGACTTGGAAAGTCACAGGAGGATTAA 33908 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ==================================================================================== ================== 34 36 99.8 32 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCAAATTAGCAAAAAATATATGAATGTATTGATCAAGAAGATTATTGAAGACATCACAGATGTTGAAAGACAAGCAATACTAAAATCAGTAAATGGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCTTTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTACATGTGGAACTAAACAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAAATCTTGTTAAGGCGACTAACGCATCAATGTTTATAATTGAATTCACAGAAAAGAATGATCAGAGATTCTTTGAAAACTGTGATAATTACTATATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAATAACG # Right flank : TAAAGTACCAAAAATATCTTATAGTACTTATAAATCTATCAGAAAATTTTCTGATAGATTTTTTTGTGCAAAAATTTTGTATTTTATGCTATATTATGATTGATAATGTAATATTATATAATATATAATATAGTTGAAGATAAGATATAAAAGAAAGTGAGGGATGATGATGAAAATTCAAGTTAGTTCTGATTTACTAGATGGTTTAGTATTAGCGCTTTTAGATAAGCAAGATTATTATGGATACTCATTGACACAGGATATGCAAAGAGCAATTTCAATTTCAGAATCAACACTCTACCCAGTATTACGCAGGTTAAAGAATAATGGTTTATTAGAAACATATGATCAATCGTATCAAGGAAGAAATCGTAGATATTATCGCATAACAAATAGTGGAGAAGAGCATTTAGGAAGAGTTAAAAAAATGTGGAGCGACTACAAAGTTAGTTTAGATTCAATTTTCGAAAAAAATAGAGAGGGGGAATAATAATGAACTC # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.10, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //