Array 1 212024-214006 **** Predicted by CRISPRDetect 2.4 *** >NZ_FWIT01000004.1 Klebsiella pneumoniae strain VRCO0118, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 212024 29 100.0 32 ............................. CAGCTGGCCGTTTTGATATGGACGACGCGCAA 212085 29 100.0 32 ............................. CAGAAATTTACCGTTGCGCCGGCGGTTCAGCA 212146 29 100.0 32 ............................. CGCAGCTGGATTCCGAGCGCGTGGTGTTCGGC 212207 29 100.0 33 ............................. AGGTATCAGCAGAAATGCTGACCCGGATCCTGC 212269 29 100.0 32 ............................. GTGCGGAACAAACCAGTAGGTGTCCAGGTCGT 212330 29 100.0 32 ............................. CTAAACCCTTTCCCCTGGACGGAGGCGCTCAC 212391 29 100.0 32 ............................. ATTAACGTTTTAATCCCGATATAGTCACTGGA 212452 29 100.0 32 ............................. TGACAACCAGATCCGAAAATCCTGGAGCCGTG 212513 29 100.0 32 ............................. CCATTTCCCCGAGTCAAAATCAGTAAAAAAAT 212574 29 100.0 32 ............................. GCGCGCGCCTCTTCGAGTTGTCGTATCAGCGA 212635 29 100.0 32 ............................. GGGACAAAAAATATCGGCGCCAACGCGGCACG 212696 29 100.0 32 ............................. CACTGATCGCGGCGTATAGCGATACGGGCCCG 212757 29 100.0 32 ............................. GCTATTGACGGGCTGAAAGAGGTGCAGGAGGC 212818 29 100.0 32 ............................. CATTTCAGGCGGCAGGGCGCGCACAACTTGCC 212879 29 100.0 32 ............................. CATACAGTATTATCATAGCGAATTCCCATTGG 212940 29 100.0 32 ............................. CCACCGAACTGGCCGTGCACATTCACCTCAAA 213001 29 100.0 32 ............................. GCGCTCGACCGCCAGACAATCGGCTTTAACGG 213062 29 96.6 32 .............T............... TTTGCGGAAAAAGTGGCCGCGTATTCCGGATT 213123 29 100.0 32 ............................. AGTGCTACACCGATACTGGCCCATCATTCCAG 213184 29 100.0 32 ............................. GTTGTCAGTCAGGGAAAATCTATCCGCAGGGG 213245 29 96.6 33 ............................T GGCGGCGCGACAAAAATTATACCCAGCAACGAA 213307 29 96.6 32 ............................A GTCGATCCCCACGGTTGAGAAATTATTGACCC 213368 29 100.0 32 ............................. CGGAGGGTTGCCAACCGATGATTTCAGCAAGG 213429 29 96.6 32 ............................C CCTGAATCCGTCAACGTTTGGAGTCTTGAGTT 213490 29 100.0 32 ............................. AAATAATCGTGCTGCTCTGACGTACCGGGCAC 213551 29 100.0 32 ............................. CGCTTCAGGGAGAAGAAACTTCCTTCGGCGCC 213612 29 100.0 32 ............................. ATAAGGCCTGGCTTTAACTCAACGGAGCACGG 213673 29 100.0 32 ............................. GGATTTCCATCTCCGGCGTCTGACTACGTTGA 213734 29 96.6 32 ..........A.................. ACGGTAATTATTTATGCCCTGGATAATATTGG 213795 29 96.6 32 .......T..................... TCTGACTGTCGAGGCATGATCTGCCCTCCGAT 213856 29 93.1 32 A..................T......... TGCGTCACGACGCCGGCGACAGTGACATCGTC 213917 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 213978 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 33 29 98.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGACACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCAGGAAAGTTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCTTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //