Array 1 3235997-3236635 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP029553.1 Methylobacterium terrae strain 17Sr1-28 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 3235997 28 100.0 33 ............................ CCTCGAGTCCCGGCAGCGCCGGCGCCTCGTCGG 3236058 28 100.0 33 ............................ CCTGAGTCATGGATCGTCGTGTCCGTGTCGGCT 3236119 28 100.0 33 ............................ CGAGGCGATGCCGCGGGACAGCATCCGGTCCCG 3236180 28 100.0 33 ............................ CAGGATTCGATGTGCCGCCGCTGTCGATTTCGA 3236241 28 100.0 33 ............................ CCCCAAGGGCGGCTTTACCTGCGTCACGGTCGT 3236302 28 100.0 33 ............................ CCGGCCGCGGCCGCACCGCACTTGCACGGTCAT 3236363 28 100.0 33 ............................ GTCCGGGTCCGCGGCGAGGTTGGACCGCAGCTT 3236424 28 100.0 33 ............................ CGTCGCACGCATCTAGGCGTTAGCGAAATCGGT 3236485 28 100.0 34 ............................ TGTCGACGCTCGGGGCCGTCACGAAGGTCAGGGG 3236547 28 100.0 33 ............................ CTTCCCGATCGGGATCGTCGTCCTGCAGCCGGT 3236608 28 82.1 0 .C..T.......T........G..A... | ========== ====== ====== ====== ============================ ================================== ================== 11 28 98.4 33 GGCTCCCCCGCCCACGCGGGGATCGACC # Left flank : CGCCCGCACGGTCGACGTCGTGATCGCGCGCCTCGGCCACGGCCCGCTGGTCTACCGCTACCGCAACGACGACGGGCTGCCGGGCCACGAGGGCACCTTCCTGATCTGCGCCTTCTGGCTCGTCGACGCGCTGGCCTGGCTCGGCCGCACCGAGGAGGCGCAGACCCGCTTCGACGCCCTGCGGGCGCTGCAGAACGACGTCGGCCTGTACGCCGAGGAGGTGGCGGAGGACCGCACCTTCCTGGGCAATTTCCCCCAGGCCTTCAGTCACCTCGCCTTCATCCACAGCGCCCTCGTCCTCGACCTCGCGCACCAGGGCGGCCGCGAGGCGGTCGCCGGCACCTACGCCGACCGGACCTTGCGCGAGACGCGCTGGCGCCGGGTGCCGTGGATCGTGCCGCCGGCGGAATGACCGGGGGCGGATCAGGTTGTAGGCTGTCGCGTCGAGCGAGGCGGCGTTCTTTGACATCGTGAATGGCACCAGCGACTTAGCTGGCAGA # Right flank : CCTCCGCCATTTCCATCCCGCAGTCCTGTGTCCACATCCCGACACCTGATCACAACACCGTGCACCGAAGACATCCTCTCGATGTGCCCGACGGCATTAACCCGATCTTGAAGGTGAACCCCGCACCCATCGTCGACACGTCGACGGACAACCTCGGGAACCATCATGGTGAAACGGCGCGGTTTCGCGGGCTTGCTCGTCGCGCTCGGTCTCGTGACCTCGGCGCCGGCCGGGGCGAGGCAGCTCACCTGGTCGGTCTTCGACGCGCCGCCCTTCACGATCGTCGAGGGCGAGAACCGCGGCCGCGGCGTCTTCGACCGGATCCGCCACTTCCTGGCCGCCCGGCTGGGCGACTACGCCGTCACCAGCGTCACGGTGCCGTTCCCGCGCATCGTCGCCTCGCTCAAGACCGGCGAGGAATGGTGCTTCGTCGGCGGGGTGAAGACGCCGGAGCGCGAGGTCTTCGCGGCGTTCTCGCGGCCGGTGGCGATGTTCTATCC # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCCCACGCGGGGATCGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 3388834-3388134 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP029553.1 Methylobacterium terrae strain 17Sr1-28 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3388833 29 100.0 32 ............................. GAGGCCGCGGGCAAGGGCCAGCCCGACGCCTC 3388772 29 100.0 32 ............................. GGCGCGCTGCGTCTCGGACAGCCTACGCATCG 3388711 29 96.6 32 ............................G CGGACTCACCGGGCCGTCATACATCGCGGGCG 3388650 29 100.0 32 ............................. GGGCGGACGCAGATCCGGGCCTATCTGAAGCT 3388589 29 100.0 32 ............................. TAGAGCTGGATGGTTTCGGAGAAATAAGAACA 3388528 29 100.0 32 ............................. TTCTCGGATGGATGGCGGGACGATATCGGTAT 3388467 29 96.6 32 ............................T GCCGGCAAAGGCGCGAAGCCGGGACTTTTCAA 3388406 29 100.0 32 ............................. CGCCCCGTGCTCCGCACCCGAGACGCCGACCG 3388345 29 100.0 32 ............................. GCGCCTTACTCGCCCGACCGTTAGCATTTCAT 3388284 29 100.0 32 ............................. ACGCGCGCCATGCTGCGCCTCGCGATCCTGGA 3388223 29 96.6 32 ..............T.............. ATCACGGACCGGTCGAGGATCCGCGTTGCGGT 3388162 29 96.6 0 .........................T... | ========== ====== ====== ====== ============================= ================================ ================== 12 29 98.9 32 GGCTCCCCCGCCCACGCGGGGATCGACCC # Left flank : CCGACCCGATCGAGCGCCTGGCGCGCCGAACGGTCGCCGAGCGGCTGCGTCGCGACGGCGTCATTCCGGCCATGATCGACCGCATCAAGACCCTGTTCGAGGAGGAGACCCCATGACGAGCCGGCCCGGGACGGACGATCCCCGCCCGAGGACGTCCGCCCCATGCCGATGACCGTGGTGGTGACGCGGGACGTCGCCGACCGCTTCCGCGGCTTCCTGTCCTCGGTGATGCCCGAGGCGGCCCCGGGCGTCTTCGTCGCCGCCGAGCTCTCCCGCGGCGTGCGCGAGCGGGTCTGGACGGTGCTGTCGGAGTGGTGGGCCGACATGCCGGGCGGCTCGATCGTGATCCTGTGGAAGGACGACGCCGCTCCCGGGCGCCTCGGCCTGCGCACGCTCGGTCTTCCTCCGCGAACTCTCGCGGACCTCGACGGCGCACTTCTCGTCCGCCGCTGACGGCGTTCTTTGACATCGTGAACAATACCAGATACTTACGTGGCAGA # Right flank : CAAGCCGACTTGCCCATCCACGGGGCCGGCATGAAGGGCCGCAGCGCCTTCGGGGCGACGCGCCGGAAGTAGTAGGTGCCGTGGCGGTCCTGAACGCGGCAGGTCACCCGTGCCATGGGTTTGTAGCACCGGCTTGTAGGACCGGCAGCTCGCAAGGCACTGATTGTCACAGAGTTTTAGCCGTATCAACGGCTTACGCCCGCATGGCGCGCCCTACGGGACTCGAACCCGTGTTTTCGCCGTGAAAGGGCGAATTTTGGCGCTTGATGGCATAGCCTGACACAGCGTGATACTCCATAGATCACAATGGTTTGTATCATACTGTGTGTTTGCGGACCATCTCGTTTCATGGCAGAGTCTGCAACGATTTTAGCAACGAAAAGTCCGCCATGCCTCGCCATGCCAGCCCGTTCAAAAGCCGCTCCAGTCGGGCAGCTCTGCCGACCTCGGACGCACCCACCTGGGAGATGATCGGGCCGGGCATCAGGCTCGGCTATCGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCCCACGCGGGGATCGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 3 3647487-3649356 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP029553.1 Methylobacterium terrae strain 17Sr1-28 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================ ================== 3647487 28 100.0 33 ............................ CGAGACGGGACAGGCACAGACCCGGTCGGGCCG 3647548 28 100.0 33 ............................ CCGATCCCGCGGGTAGGGCGGGAAGGCGGCCCC 3647609 28 100.0 33 ............................ CCCGACCTCGACCAGCTGGGACCTCGTCTCGAA 3647670 28 100.0 33 ............................ GTAGACCCAACGCCGGTGCCCCTCGGCCTCGAG 3647731 28 100.0 33 ............................ GTCGGGCCCGGGGAGAGGGCCGAAGCCGAAGGA 3647792 28 100.0 33 ............................ CCCGAAGCCGCACGAGGGACACTAATGACTGAA 3647853 28 100.0 33 ............................ CGTGTAGCTGTCGTCCTTCGCCGCCTTGGCGAC 3647914 28 100.0 33 ............................ CTCGGCGGCTATCGCGTGCTGCTGACCTGGATC 3647975 28 100.0 33 ............................ CTCGCTGGCCTCGGGCGCTTCGAAGTCGAAGTA 3648036 28 100.0 33 ............................ CGTGTCGGCCCTGACGACGCTCGGCGCCACCCG 3648097 28 100.0 33 ............................ CCCCTCGTCGAAGCTGACCGACCGGCAAGTCGC 3648158 28 100.0 33 ............................ CGATCCTAAGGCCGAACCTTGGGCCGACGAGCC 3648219 28 100.0 33 ............................ CGTGCGGTCAAGTTGCGTGCGTAGACGCGATCC 3648280 28 100.0 33 ............................ CTGGCCGACCTCTTCGAGCGTGCCCGTGCCGTC 3648341 28 100.0 33 ............................ CCTCGCGACGCTCACGGCCTTCGGGGCGACCCG 3648402 28 100.0 33 ............................ CCAGGTCTCGGCGATCGCGTCGGTCCCGACCGC 3648463 28 100.0 44 ............................ TTCAGACGCCGGCATCACGCCCCCGTCTCGTCCTCGCAAGCGAC 3648535 28 100.0 33 ............................ GGCTTCGGGTTCTCTAGCGGCGAGCACATGGTC 3648596 28 100.0 33 ............................ CCAGCATCCAGTTTCCAGAGCGCTTGAGTTTCC 3648657 28 100.0 33 ............................ TTTTCTTATTCATCCGTATGGCGGGGCGTCGAA 3648718 28 100.0 33 ............................ CCCTCCGACCACGCCGATGATGCCGCCAAGCCA 3648779 28 100.0 33 ............................ CCACGCATCCAGGCCGGCGACGCCGGAGCGGAA 3648840 28 92.9 33 .............TT............. CTGCCTGCCGCGGGCCGACGGCTACGGCCCGTT 3648901 28 100.0 33 ............................ CCGATAGGTGTCCTGGTCCTCGATCAGCGTGTC 3648962 28 100.0 33 ............................ TGCGTGGCTCGGCCAGACGCTCGACATGCTTAA 3649023 28 100.0 33 ............................ CCCGCCGCGCACTTCCAGTTGATGGAGTTCGCG 3649084 28 100.0 33 ............................ CTCGGACAGGGGTGCGACCTGAGCTGCGGAGTG 3649145 28 100.0 33 ............................ CGCCGTGTTCTTCGCGGTGTCCACCTGGATCTA 3649206 28 100.0 33 ............................ CCCGGTTTGCCGCCGCGATCGCTTCGACGAAGG 3649267 28 100.0 33 ............................ CCGGGGAAATTTGACGGCCAGGGTTAATCCGTG C [3649271] 3649329 28 85.7 0 ........................CCTG | ========== ====== ====== ====== ============================ ============================================ ================== 31 28 99.3 33 GGCTCCCCCGCCTACGCGGGGATCGACC # Left flank : CGTCCAGCCCCTGCCACCAGACCGCCCGGCGGCGGGGAAAGCCCCGCACATCCTCGCGCCGCAGGGGCGGCAGGTGCTCGCCGAAGCGCTGCCGGTAGGCGGCGTAGAGGTCGTCCCGGTGCCCCCGCTCCTCGTCGGCCATCGCCTCGAACAGCCCGGCGGAGCCCGGCAGATCGGCCCGCAGGCTCTCGGCGAAGCTGCGATAGATGCGGGAATCCTCCTCCTCGCTGGCGATGGCGAGCGCCAGCACCTCGCGCTCGGTGAGATCGGTCAGGGCCATCATGCGCGCGCTCCTGTTTGGAATGGCTCCAATCTATTGATTGGAGCCATTCCAAACAAGGTCCGTCGGGCGGTGGGACGCACCCGATCGATCGTCACGCCACCCCCTCGACGAACCGGCGCGCGCCCGGCATTCTCTCGAAGCTGGGCATTAGGTATTTGGTCCCATATCGGCGACGCTCTTTGACATCGTGAATGGTGCCAGATACTTATCTGGCAGA # Right flank : GCCGAAACCGACCCCCGTCGCAACGCGGGTGTGGTGCCGCACGCGGCCGACGGTTGCCTCGCGGTCCCGAACGGAGCATGACGGCGCCCGGATTCGCGGGGGGGCGCCCGCGTCGCGTCCCGCCGCGTGCCCCCCTTCCCTTGGCGTCCCCTTCCCGAGCGTTTCGTCCGCATGAGCGTCGTCACCCGCATCGCCCGCAGCCGGGCGGCCCAGGAGAGCCTCGGCTTCCTCGGCGCGAGCTACCTGAAGCTGGTGCGCCGCACGAATCGCTTCAGCCTCGACCCGCCCGATGCCTACGACTGGCTGACGCCGCTGCGGCCGTTCATCGCCGCGATGTGGCACGGCCAGCACCTGATGGTGCCGTTCGTGCGCCGGCCCCAGGACCGGGTCGCCACGATGGTGTCGCGCTCGGTCGACGGGGGCGTGAACACCGCGGTGCTCGAGCGGATGGGCGTGCGGGTGATGCGCGGTTCCGGCGCCCGGCGCTCCAGCGACGTCTG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCCTACGCGGGGATCGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //