Array 1 501-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAECVR010000071.1 Paenactinomyces guangxiensis strain CICC 11033=CGMCC 4.7156 NODE_71_length_526_cov_0.885246, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ======================================= ================== 500 31 100.0 34 ............................... TCCAAAAAGACTTCCCATTGCTCCTCTTCGTGGG 435 31 100.0 35 ............................... TGATCATGGCAAGCTTATTAATAATCGCAGAAGCT 369 31 100.0 36 ............................... ACCCATTGAGGGATTCGAAATAGTCCATCACGGAAC 302 31 100.0 36 ............................... CACCTTCTGCATGGTTACAATCAACTAACCATTCGA 235 31 100.0 39 ............................... TTCGCACTACTGAGCAGCAGCAGGAGCAAGACAAAGCCG 165 31 100.0 37 ............................... GATGACATGGCTATTCACCTCCAGAGAACGTGTGGCG 97 31 100.0 36 ............................... GTCATATCCCTTGTTTCTACCGTGTGCTTCTCGTTC 30 30 96.8 0 ..............................- | ========== ====== ====== ====== =============================== ======================================= ================== 8 31 99.6 36 GTTTTAATTGAATCCATAGTGGAATTGAAAG # Left flank : TTACGAAGCTTCTGCGTGTTCACGG # Right flank : A # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATTGAATCCATAGTGGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.20,-2.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA // Array 1 78944-78378 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAECVR010000001.1 Paenactinomyces guangxiensis strain CICC 11033=CGMCC 4.7156 NODE_1_length_647122_cov_2.256118, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ======================================= ================== 78943 31 100.0 38 ............................... GCCGCCCTCAATGTAAAGCGGATTAATGAGAAAGCCAT 78874 31 100.0 35 ............................... CTCCTTTGAGCGGGGGCAGAGCTGCACATATGAAA 78808 31 100.0 39 ............................... CATGAATTACGATTTGCAAATGTCGCTATTTTGAGAGGA 78738 31 100.0 35 ............................... TCCTCTTCCTCCCATCAATTGTTACTGTGATTACC 78672 31 100.0 34 ............................... CATCATGCTTATCTCCTCCCTGTTCAAGCACACA 78607 31 100.0 36 ............................... GTAACTTCCCCGATTGGTTTGCCTTCTGAAATGAAT 78540 31 100.0 36 ............................... GCAGAGAAGTATCTGAAGCGTCTGCATAGGGGTCGG 78473 31 96.8 34 ..............................G AACATTGTGGTTCCCTCCTATGACCATGCACCAC 78408 31 80.6 0 C.....G...T.......A..........TG | ========== ====== ====== ====== =============================== ======================================= ================== 9 31 97.5 36 GGTTTAATTGCATCCATAGTGGAATTGAAAT # Left flank : CCTTGGCAGAAATGTAAGTTATCAACGATTAATCCGCCTGGAATGCTACAAGCTTGTGAAACATATCCTTGGAGAAAAAATATACTCCAGTTTTAAAATCTGGTGGTAACAAAAGAGGGGATCATCATGTATGTTCTGGGTGTCTATGATATAAATGTCAAGCGGGTAGCGAAGGTGAAAAAAATATTCAGCCGATACATGTTCTGGATGCAAAACTCCACTTTTGAAGGAAACCTCACCAAAGTTCAGCTCCGTGAGTTACAGAGAGAACTCAACTCTGTTGTTAATCCAAATGAAGATCATATTATCTTCTATGTCATTCGCAATGAAGATGTAGTAACCAAAACGATCATCGGAGAAAGACATTCAGAGCCCAGCAACATCCTTTAGTTGCCTAAAGTCTGTGAACCTCCCGGGATTTTTGCAGGATTGGGGGTTTACAGACTTTAGGGGAAAGAAATAGAATGAAAAGTGTTGATATTAGTGGGTTTATTTGAAGG # Right flank : GTGGATTCAGCCACATTATCTTTTGCACTTAATGCTTGGAACAAGGTTATTGAAAATAAACTGTGATTCCGATATTGATGTCAATTTGATCAAATGCAAAGGACCTGTGGAAAAAGAAAAAACTCAGCGTCTATTGTTTATTGGGATGCTGAGTTTTGTCTATTCTGCAATTGAAAATCATGTTATATTACAAATTAACTTCCTACAGTGTCTTCGTCTTCTTCAGGCATGACGGAAAGATTAAAGATTAAAGAATATCATAAAAGTCATCCTCATCTTCTAATTTCATTTCGTGTTGGAGGAAAAAGAGCCTTCTTGTACAGTGGTTAAACTCTTCCTCTTTTCCTAGACTATCAAAAAATTCCCCCAATTTAAAGAGTGCGATAAATTGCAGGCTTTTGTGGTCATTCTGTTGGACTAGATCAGCGGCTTCCTGATAATAGGGGGCCGCTTTTTCATATTGTTGTTGACCTACGTAACAGTTCCCTTTAGCAATTAAC # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:0, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTTAATTGCATCCATAGTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.74%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.20,-2.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 2 87960-88824 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAECVR010000001.1 Paenactinomyces guangxiensis strain CICC 11033=CGMCC 4.7156 NODE_1_length_647122_cov_2.256118, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ============================================================================================================================= ================== 87960 31 100.0 125 ............................... GCAACAGCCATTTTCCATCATCTCCCCTGTTTACATTTTTTCTAATGTGTCATAATAATAAGAGTAGCGGGAAGGACAGTCCGCCAACTGCCCGACCCTTAACCTTAACCTTACCAGTTCACCGC 88116 31 100.0 38 ............................... CAACTATACGCCACCTTCCCGCTTACGGGCGCTCAGAG 88185 31 100.0 38 ............................... AATGGCGGCGGCATTACAGCGGGGAAGATGGAAGGGAC 88254 31 100.0 34 ............................... TCGCGCTTTTCTTCATGGTGGTCTAAGCTTCGGC 88319 31 100.0 41 ............................... TGGGTACGAAGTCACTATTTACCCAAACGCAGCTTGGAAAA 88391 31 100.0 36 ............................... ATAACTTTCGGTTTGTTCTGTTGGAAGTCCCGTCAC 88458 31 100.0 37 ............................... CCATTACGATTTTACGAAGCTTCTGCGTGTTCACGGG 88526 31 100.0 36 ............................... GTCATATCCCTTGTTTCTACCGTGTGCTTCTCGTTC 88593 31 100.0 35 ............................... GGATGAAAGCGGAGAGGAACCCACAGTCGAGCTGA 88659 31 100.0 35 ............................... ATAGGATGGCCTTTCTTTGTTTTGATGCGCTTGAC 88725 31 100.0 38 ............................... TCACGGCAGGGGGACCCCTTCCCCAAAACTTTATGAGG 88794 31 96.8 0 .....................A......... | ========== ====== ====== ====== =============================== ============================================================================================================================= ================== 12 31 99.7 45 GTTTTAATTGAATCCATAGTGGAATTGAAAG # Left flank : AGATTGACTTCTCGATCGAGGTAAAATTTGGCTGAAATACGTATGATTTCACCTCCATATGCGATAAGAAGAATAAGTAATGTTACTTACTATTGACACAAGTTAAATTTATCAGAATTCAATTATGGGGTCAAGTACTTTCTATTTTGCTTTCCAATTTATATCTTTTTTAACATAAAGGGTAAGCCATTTTTGCAGCTAGACTTATGGTATAATCATGTTTTATATTGTAATTATCTATAGATGTTCACTACTTTTTGATTTGTATTGAAGTTCATTTTGGGATTGAAAGATAAGGAAAATAAAGTAATGTTGAGTTGCATCCATGTTGGATTTGTTTGATATATTGCTTCTAAGAAGTATAAAAAATAATTGGCATAGACCCTTTTTCGAATAAAAGTCTGTGAACCTCCCGGGATTTTTGCAAGATTGGAGGTTTACAGACTTTACAGGCATGAAATAAAATGAAAAGTGTTGGTATTAGTAGGTTTATTTGAAGG # Right flank : GAAAACTTAACCTTATCAGTTATACTATTCATAAGCGTTTTAATGGGAAGAGGTGCCTCTGCACAGGCACCTCTGTTCATTTATGTCAGAAACTCTAAATCCTGTCTGATCGCTGTCCTATTCTCACTCAAAAAAGAATAGCCGCTTGGTATGTGCTCCCCTTGGAACGGCGAAGGCCTGGGCCCGTTTAAATCCGGCAGGCGCCCCCCTGACAATGGTCAGCGCTTTATAGTATTCGATAAACGGAAAGCCGGAGGTTTCGCCCCGGGCATAGGCATAGCAGTGCATGGCTTTTACCCAGGTTTCGTAGGCTTCCTCGGGGATATCTATAAACACCTCGGGTTCAAAATCATACGGATCTTCCCAGTTATCCGCATAGTAGAGTTTCCTGGTAAAATGAGCCGGTAAGTCGCGTTGGATCGTCTTTAAGGCAGCATAAAACCGGGCATCTTCAACAATATGGTAAGTATTGGTATGGTCCTTATGGATGCTGCCTTTCC # Questionable array : NO Score: 8.48 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:-0.76, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATTGAATCCATAGTGGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.20,-2.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //