Array 1 157287-155988 **** Predicted by CRISPRDetect 2.4 *** >NZ_MVEC01000010.1 Spirosoma sp. 209 contig10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 157286 37 100.0 37 ..................................... GTATCCACCGCGAGTCCGGCGTGAAACCCGCAAACAG 157212 37 100.0 36 ..................................... TACAATATTGTCTCGGGCCGCAATGAGCTTACGTAT 157139 37 100.0 36 ..................................... TACAATATTGTCTCGGGCCGCAATGAGCTTACGTAT 157066 37 100.0 37 ..................................... ATCAAATTAATTAGATGCCGATGCAGCTCCGCGTTGG 156992 37 100.0 35 ..................................... AGCGTAACGACAACATTATGGGTGTTACGTTTCCC 156920 37 100.0 39 ..................................... CTTATGTTGTCCAAAAAGCCCTGTAGCTATGTTCGCATT 156844 37 100.0 36 ..................................... TGAATCTGCAGGGGCTGGAGCACCGTCAGCCGTTCG 156771 37 100.0 38 ..................................... TAGTAGCGGATGATCTCGACCGCCAGCCGGGGGGCGGT 156696 37 100.0 44 ..................................... CGCTCCCGTTCCAGGCTTACCTGTTGATCGGTAACGACGGTCGA 156615 37 97.3 36 ....................................T CGGTCTATAAATATTCCTTTCATGAAAAATCAAGGT 156542 37 100.0 37 ..................................... GCCTGGCCTTTTCGCCCGTATTGCGGCAGACGGAACA 156468 37 100.0 37 ..................................... CACCTTCAGCAGTTGTCAAGCCCTAATACTCAGTAGG 156394 37 100.0 36 ..................................... ACCCCGTAGTAGGTGCCGCTGGAGACATTGCCCGGG 156321 37 100.0 38 ..................................... AAGATGCTATCGTAAAGCTCTATCGATGGCTCGCCACT 156246 37 100.0 35 ..................................... CCGTAGCCGGCAGCCTTATCGAACTCCGAGGCCTT 156174 37 100.0 38 ..................................... TTCATCGTCCAGCCGTTGCGGCCTTCCGTCACAATCGT 156099 37 94.6 38 ....G...............A................ GCGCATTTGGTCAGCTCGAACGCATCGGCCGCCGTATC 156024 37 78.4 0 ....G..........A.......GA...A.....GGT | ========== ====== ====== ====== ===================================== ============================================ ================== 18 37 98.3 37 CTTCAAATGGCTGATCCAGAGAAAGATGGATTGAAAC # Left flank : AATACCTAATCCTATGGAGTTTTTCACCG # Right flank : GTTATGGCTTCGGCGCTTTTCGAGAATGACTGAGCAGATTCGAGAAAAGGGTGAACGGGATCTTTCACTGGGCGCAAAAAACAGCGGAAGCCAGGTTCGTAGCAATACGGTAGACTGGGCTGAAATCGTGAGAACGCCAATTTTAGCGGACTGGGTTGGTTATTTGTTTTAGAACCTGTAGATTCGGTAACAATGAGCGTTATGGAGCTTGATTACCAAACTAATCTTTAGGGTCTATTTGTTGTCTAACTGGCAAATAACAACCAAGTTGAAAACGAGAGAACCAATGCGCTATGCGCTGATTACCCTGTGGGTGCTGTTTACGTTGCAAGGGGTGAACGCGCAACCCAAGGGCTATACCCTGGGCGATGCGGTAGCCGACTTCCGGCTGAAGAATGTGGACGGGCGCACCGTAGGCCTGGCCGACTACAAAAGCCAGAAAGGATTGATTGTGGTCTTTACCAGCAACCATTGCCCGTTCTCGAAAGCCTATGACGACC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:0, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCAAATGGCTGATCCAGAGAAAGATGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.90,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA // Array 1 20-1243 **** Predicted by CRISPRDetect 2.4 *** >NZ_MVEC01000001.1 Spirosoma sp. 209 contig1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================ ================== 20 30 100.0 37 .............................. TTTGAAGTAGTTCAGGCAATCACCACTAGGCACTCGT 87 30 100.0 35 .............................. TGATCGCGGTAATCGACGGTTTCAAAGACATACTC 152 30 100.0 36 .............................. GAAAGGACTGAGCAAAACAAGTCAGGACGGACTGGC 218 30 100.0 44 .............................. TTTGAAGTAGTTCAGGCAATCACCACTAGGCACTCGTCTTCAAA 292 30 73.3 37 AAAAA..AAA.................... TTTGAAGTAGTTCAGGCAATCACCACTAGGCACTCGT 359 30 100.0 35 .............................. TGATCGCGGTAATCGACGGTTTCAAAGACATACTC 424 30 100.0 34 .............................. GGCTATCTCGGTGACAAGCATACCTTTACGTCCG 488 30 100.0 36 .............................. TTGATGTCCTTCTACGCATTAAGCACAGCGAAAACT 554 30 100.0 36 .............................. GGGAGCTCCTGGCCTCGTTTCGCACGACAGCAGCCA 620 30 96.7 36 ...A.......................... TATTTCAGGATAAAATCAAGCGTATTTGTCAGCTTT 686 30 96.7 37 ...A.......................... GGCGCAGCTGACGCTGGACACCGAACAGGTATTCACT 753 30 100.0 36 .............................. GCAATTTGTCGATATGAAATACGAACAGGCGATGGC 819 30 100.0 36 .............................. TGTTCAACCCGTTGAGCGTCGTTCGCAGGCTTTCCA 885 30 96.7 36 T............................. GCTGAAAACTATTAACCTGGTGAACGTCTCGGCCGA 951 30 100.0 34 .............................. CTGGAGAAATACTATACAGGGAGCACGTTGGTGA 1015 30 100.0 37 .............................. CAAAGAACCAGGTCCGACCGGCCTCCGAGCTCGCTAC 1082 30 100.0 35 .............................. TTAATAGCCTCCGGGGTGTTCTTAACGGTCTGGTT 1147 30 100.0 37 .............................. TCGACGTCAACAGCAAGGATAACGACGGCTAGGAAGA 1214 30 93.3 0 ..........C.................G. | ========== ====== ====== ====== ============================== ============================================ ================== 19 30 97.7 36 CTTCTAATCGTACCTGAGTGGAATTGAAAT # Left flank : CAAGTCAGGACGGACTGGCC # Right flank : TGGGCGGGGAGTTGGTTGAGTTACGGCGGTTGGTCCGTTAGGATTTGGGGGGTTGGTTCTTTGGTTGATGAAGGTACTCCATAATGCCTGATGCTAACTATGAAATCATACCTCATTGCGCTGGCTACAGCGGTCGTGCTGGCGGGCTGCTCCGGCGCTAACACCACCCAACAGGCCAATGGCTGGACCAGCCTCTTCGATGGAAAAACCCTCACCGGCTGGCGGGCCGCCGAAAACCCGGCCACCTTTAGCGTACAGGATGGGGCCATTGTAGTCTTCGGCCCACGGGCGCACCTGTTCTACGACGGGCCCGTCAACAACCATTCGTTCAAGAACTTCGAGTGGAAAGCGCAGGTGAAAACGATGCCCGGCGCCAACTCCGGCATGTTCATCCATACCACCTACCAGGATACCGGCTGGCCCGTCAACGGCTACGAAATTCAGGTGAACCAGACCCATACCGACTGGCGAAAAACCGGCAGCGTGTACTCGTTTCAGGA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:0, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCTAATCGTACCTGAGTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [11.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : NA // Array 1 966-37 **** Predicted by CRISPRDetect 2.4 *** >NZ_MVEC01000028.1 Spirosoma sp. 209 contig28, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 965 37 100.0 42 ..................................... GCCAGTACACCGTCGCCATCCCCTCGCGGATTATTCCGCAAC 886 37 100.0 36 ..................................... TACATTCCACAGGAGATACTACTACACGACGGGCTT 813 37 100.0 37 ..................................... ATCCCCAGCAGTTCGGCTTCGGCGATTACTACAGCCC 739 37 100.0 36 ..................................... TGGACGAGTCGATGACCGCCATTGACTGCATGAACG 666 37 100.0 37 ..................................... CCCACATATATAAGGAATATAAAAACTATAAAAAGAA 592 37 100.0 37 ..................................... AGGTTACGACCCCGCAGACCGCCGGGGTTTTTATCCA 518 37 100.0 37 ..................................... CTAGCAACCCATAAACCCCGCGCACGGAGATGGATTA 444 37 100.0 36 ..................................... ACGCTACGGGCCAACGTGGTTTTCCGACGCTCCAGC 371 37 100.0 37 ..................................... TTACCTGCACCGGTGGTGCTGCCCGGTTCACGGTCAG 297 37 100.0 38 ..................................... AACTTCCGGGTCGATCCTGACTCACCAGCGAGATAATA 222 37 100.0 39 ..................................... ATTTTTTCGTGCAGGATATAGCCACCAATCGTGTTTTCA 146 37 100.0 36 ..................................... AACCTGATGGCTGGCCAGTGTAAAGGTGAAGTGCTT 73 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 13 37 100.0 37 CTTCAAATGGCTGATCCAGAGAAAGATGGATTGAAAC # Left flank : CGCTGGATTACAAGTTTGCGGAGTTTAAAGACCGGGTGTACAGTACGTACGAGACGCAGCTGTACTGTTACGCCTGGTTGATCGAAACAAACTTTAACCGGCCTGTTGACCGGGGCTTTCTGGTCTACACGCGTAGTAACAACCGGGTTGTTGAACTACCGATTACGGATGCGAACAAAGGCGACGTGAAGCGGGCTGCTGAGGCTATTTTCTCTATCATCGATCGTAATTTCTTTCCAAAGGCTACAAAGGCAAAATCCCGTTGTGTAACTTGCACATACAGGAACGTTTGCATCAAGTAATGCCAGCTTCCGGAGGGTAACGTATTTTCGGTTTGAGAAAATAAGGATGTAGTGAGTTGAAAGTCAGGTAATTATTGTTTCGGAAAAGTAGCTGCAAAGCGTGATTAGCGATGTTCTTTGACGTAGTAAATCAAAAAAATAGCACGAAGCAGAACACGTCTAAGTACCTGTCGGTGAATGGTTTACCCAGCCCGACGA # Right flank : CTTGTAAACCGTATCGGTTTTCTGGCTGGATCGCCCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCAAATGGCTGATCCAGAGAAAGATGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.90,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [28.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : NA // Array 1 8170-8786 **** Predicted by CRISPRDetect 2.4 *** >NZ_MVEC01000034.1 Spirosoma sp. 209 contig34, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 8170 29 100.0 36 ............................. TTCGGCCCTTCTAATGCGGTCTGCCTGTGCTTTGGT 8235 29 100.0 37 ............................. ATCAATGAAGAAGCTCACCAACGGTTAGTGAGTGAGC 8301 29 100.0 36 ............................. GCGAGAAGAAGCCGCGCAAGCCCCGTTCCTCGGCCA 8366 29 100.0 37 ............................. TAGTGCACCCCGTTGATGGTTAACTCGGTGTAGATGC 8432 29 100.0 37 ............................. TTGGTATCGCGTGGTAATACCAGGCTTCGATCTCAGC 8498 29 100.0 36 ............................. TCTGCCTGACCACCAGCAACGGGGGTAAGTTTCTGA 8563 29 100.0 36 ............................. GAAGTGACGATGAGTCTGAACCAGCTCCGCAAACTC 8628 29 100.0 36 ............................. ATGATAACCGGCGATTGTTTCGGTATTTGTTTTGGC 8693 29 100.0 36 ............................. GAAGTGACGATGAGTCTGAACCAGCTCCGCAAACTC 8758 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================== ================== 10 29 100.0 36 GTATCAATCGGACCTTCGGGTATTGAAAG # Left flank : ACTAACTCGTTAGAATTATGCCGTTTTGTATTGCCGTCTATGATGTCAACCAGAAGCGAGTGGGTAAAATGCTCAAGTTATTCCGGCGCTACCTGACCTGGGTACAAAATTCTGTCTTTGAAGGTGACCTAACCGTTGGTCAGTTAAAGCAGCTACAGCTAGAAGCGGATGCGCTTTTGCAGGACGATGACGGTGTAGTGTTCTATCAGTTTCGCGACGAACGCTACGTCGAACGTATTGCACTCGGCACCGATGACGTAAACCGCACAAGGTTCTTATAAGTCGTCAGCCTGTCGAAACTGGGGAATTATTTTAGAATCAACGTGGCCTATTCTAGGATGCTCAATTAGACAGACCAAGCCGTACTGCCTGTAAATGGTCTTTTCATCAAGTCGTCAGCCCCCTGCTTTTTTGGCAGTACTTCAGGCTGACGCTTTTTTGTGTTATTTTTAAGTCTAAAAACCCCTTTAGAAGCACGTGCAGTGCTTTTTTATGGCAGG # Right flank : ATGATAACCGGCGATTGTTTCGGTATTTGTTTTGGCGTATCAATCGGACCTTCGGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATCAATCGGACCTTCGGGTATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : NA // Array 1 319283-320861 **** Predicted by CRISPRDetect 2.4 *** >NZ_MVEC01000005.1 Spirosoma sp. 209 contig5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 319283 37 100.0 37 ..................................... ATCATCATCGCTGGCACCACCTTACTGGTCAATTATG 319357 37 100.0 36 ..................................... CAATACTTTCCCCGGCTCGCCCAACCTGACGTATCG 319430 37 100.0 37 ..................................... GCCATCTGGCGATATGGGGCTGGGCCAGCTGGCCATA 319504 37 100.0 41 ..................................... AAATCTGAACCTTTCGACCCACAATACCACCCATCCGCACC 319582 37 100.0 36 ..................................... TTCAGGCGTACCAGACGGTACTCGAACAGGCTGGTG 319655 37 100.0 37 ..................................... ACCTCGCGACGCATACCTACGTCTGTGATACGGACAT 319729 37 100.0 36 ..................................... CGATCACACGCTACCCGCTGGTACGTACCGCTCGGC 319802 37 100.0 38 ..................................... CGTAGACGCGGGTAATGCCGCTAGCTTTCCACGCCCCG 319877 37 100.0 37 ..................................... GGTCGGAACTTGTCGAGCGGATTGCGACTCAGCAGGT 319951 37 100.0 38 ..................................... GTCAATTCTTACCTCGAAGAAGTAACTATCGTAGCCTG 320026 37 100.0 19 ..................................... TAGCCCCTCCCTGTCCCGT Deletion [320082] 320082 37 64.9 36 A..GCCCT.AA.ACG..TT.................. AGAACGTGGCCCTGGCTAAGCTCGTCGTGCACAAAT 320155 37 100.0 36 ..................................... AGAACGTGGCCCTGGCTAAGCTCGTCGTGCACAAAT 320228 37 100.0 38 ..................................... GTCAATTCTTACCTCGAAGAAGTAACTATCGTAGCCTG 320303 37 100.0 39 ..................................... TAGCCCCTCCCTGTCCCGTATTGCCCTGAATACGCCCCG 320379 37 100.0 38 ..................................... CAACGCTGACCTGGAAAGTGCGAGTATCGACACGACGG 320454 37 100.0 39 ..................................... AAGACCTCGCAGCGGGGTATAAGGGCAAGGGTAAGCGCA 320530 37 100.0 38 ..................................... GCATGGTGTCCGTCGCCGGAACAGTCGTGATGGTTGCC 320605 37 100.0 36 ..................................... AGAACGTGGCCCTGGCTAAGCTCGTCGTGCACAAAT 320678 37 100.0 36 ..................................... AGAACGTGGCCCTGGCTAAGCTCGTCGTGCACAAAT 320751 37 100.0 37 ..................................... AGGTAGTTACTTAGCCCGATCATGGGCATACCCTCGA 320825 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 22 37 98.4 36 CTTCGAAAGGTTGATCCAGTTAAAGAAGGATTGAAAC # Left flank : TCTGGAACGCCAGCCTTGCCCAACGGTTGTTCAAGAGTCAGAACGGCGAGCTGAAGCTGTCGGTCTTCGACCTGCTTAATCAGAACAACAGCATCAGCCGGACCTTTTCGGAGACCTACCTGGAAGATAACCGCTCGCTGGTGCTGAACCGGTATTTCATGCTGACATTCACCTACAACCTCCGCCAGTTCAAATCCTGAGCCGGAACGGGCTGTGTGGTCAACAGTGTGTATTTAGGCAAAGGTCATGGAGACAAGCGCCCATTGGGTAACTTGCAGGCTGGGTACTAACCCAGGTTGGCAGACCACTGCCGGGCACCAATCTATTGGCAGGCCCGGCAAAACATGCGCCATCTGCCTTATTTTCAGCTTTTTACGCGTACGGAAAAGTAGATAAAAATGTCGATCAACAATGGTCTTTGACGTATTGAAAGGGGTAAAAAAACAACCAGCAAATCAGGCATACCTCCCTGACAATGAATTATTTATGCACCCAAACGA # Right flank : CGCGTTCACCTGACCAGGCACGTTGACCAACATACGCTCTTCGATTAGTTTCCAGTGCCCGGGCACTCCCCTTTTGCAACGGTCCGAATCCCCGACGCCATAGCCACACAGGCATTGCCATAGGTTTTACCGTTGCAGCCGCAAACCGGGTCGTACTGCATGGTGCAACCAATATCCGGGTTGATTTTTTCTACGCAATCAGCCTCTACCACTACGGTTCGGGATTCACAGCCAAATCCAGCCAGCAGCACAAATACCGTGAAGAACGTTTTCATACAGTTACAGCATTTTTTGAGTAATGATCCATAACTAACCAAAAGGGTTGTAGTTGGCGTTATTTTTTAGTGATGATGCTGCCAGCCGTGCTTCAGAGTTGTCGGAGAAAGGTAGTAGCCGACTTTACCTGGCTCGAGTGAGAGAGCTCTTTCACTCCCAGCCCCGCGACGGCAGCCCGGCCTAAGAGATTTCTATGGTTTAAGCAAGTGAATACGCATAGGTTT # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:0, 3:3, 4:0.92, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCGAAAGGTTGATCCAGTTAAAGAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.10,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : NA // Array 1 35-1049 **** Predicted by CRISPRDetect 2.4 *** >NZ_MVEC01000004.1 Spirosoma sp. 209 contig4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 35 29 100.0 36 ............................. AGTATAAACAGCTTAAAAGTTGGTACGCCAATACGA 100 29 100.0 37 ............................. AGGTGTCGGCAGCACTGCCTGTGGCCAGCTACAAAGT 166 29 100.0 38 ............................. AGTAGTGAAAGCATAACTCCGCCGCGACGAGCCAGCTA 233 29 100.0 36 ............................. AGTATAAACAGCTTAAAAGTTGGTACGCCAATACGA 298 29 100.0 37 ............................. GCGGGTTCGTAGGCGACGCCCCACTCGCCGAGATGAA 364 29 100.0 38 ............................. GGCCGTTGGTGAAAACAAAATCATTACAGCACTGGTGC 431 29 100.0 36 ............................. GTCATATTCAATAGCCGCGTCTGGCTGATCGGCGCC 496 29 100.0 36 ............................. ATACCACGGACGGCATACGCCCCAACGATGCCGGTA 561 29 96.6 37 .........A................... GGCAACGGTCTTGCTCAACCAAGCAATCCAGTTTGAC 627 29 100.0 37 ............................. TTCACGGATGAAACGTCGGCTGTGAACGACAACTGTA 693 29 100.0 36 ............................. GTTGTCGTGATACGTCGAGAAAATAGATAGGAAGTT 758 29 100.0 37 ............................. CCGTATTCATGCAGCAGGGTGGCCGTGGTGGCATCGG 824 29 100.0 37 ............................. TTGTTCATCCCGCCAGTCTGCGGGGCCTGGCCTACGA 890 29 100.0 38 ............................. GTTGCCGGGATTGTCTCATTCGATAGCGTACTGACCGC 957 29 93.1 35 ...........C................T GCGTTCAGGTGCTCAGAGCTTCCACCACAATCGTT 1021 29 79.3 0 ..C.......A...CC.TT.......... | ========== ====== ====== ====== ============================= ====================================== ================== 16 29 98.1 37 GTATCAATCGGACCTTCGGGTATTGAAAG # Left flank : CAGGGTGGCCGCGGTAGCGGAAAAACCACTACCCG # Right flank : GCCAGTATTTAATGACAGTTCCTCAATGAGCCTTACATTTTAATTGCACTATACTACACGTTAGAACGTATAGAATTGGTATAGCGTAGTAATTGACTATAACTCCTTGACAATTAGAATTATACTATGCTTAATAATCACTGTTAAACTAGTTGTTTATCGCCTGAAACCGCGTCGGTGTTGCTGCTTTTGCCCCCTTTTTGCACGCATCTGTTGCGCTAGTCTTTTAATTTCGTCTTCGTTGTTGGGTTGATCTTTTACAGCTTGGTACGGTTTGCTGTATTTCCCTTCTGCGTCTTGCTGACTAGACTTGTTGGGTTCCGTTTGTTGTTGTCGGTAAGACGTAATCATACTAACCGCTTTATCCTGACTTTGAGAAATGTCAGGTGCTGGCTCGGGCGGTGTGGGCTCTCCTAAATACTCCCGTTGTTCTTGAGCAAAACGGGCTTGTACATCTTTGACCTTCTTTTCGTGCAAAGTTTGAAGCCTCTGTAATTGAC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATCAATCGGACCTTCGGGTATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA //