Array 1 37404-40725 **** Predicted by CRISPRDetect 2.4 *** >NZ_SDGS01000003.1 Macrococcus canis strain DPC7169 NODE_3_length_165069_cov_121.575, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 37404 36 100.0 30 .................................... GCTGATATGTAACTTGTCAGCTATGCCATC 37470 36 100.0 30 .................................... TACTTCAGGTGTAACATTGAGTGATATTAA 37536 36 100.0 31 .................................... AACGTCCTATGATGAGCGATTTAAGGGAAGC 37603 36 100.0 30 .................................... GTGATGAAGTTGATACACGACAACGAAAGC 37669 36 100.0 30 .................................... CGACCAATCAAAGCTAGTTAAAAAGTCTGT 37735 36 100.0 30 .................................... TCTATAAATAACTTTCTGCCAAAAGTCAGT 37801 36 100.0 30 .................................... TCGCTAATTCAACAGGTAACACCTCTTGAA 37867 36 100.0 29 .................................... AAATTAGATAGAAGTGTAAATGAATTATT 37932 36 100.0 29 .................................... CTAGGAATAAATGCTACCGCGATTACTAC 37997 36 100.0 29 .................................... ATAAGCTACTCGAGATGATGTTTAAAGGG 38062 36 100.0 30 .................................... AAACGAGGAACAGATGGTTGAATCGCTTAA 38128 36 100.0 30 .................................... TCACCCCAGTTAATAAAGATTCCTGTAATC 38194 36 100.0 29 .................................... TTTAAATCATTAAATATGCGTGAGGTTTT 38259 36 100.0 30 .................................... GAACTCTGCTCCAGCTTTATTGCTGCCTAA 38325 36 100.0 30 .................................... CACCAGATCATAGAAAGCGTGTAAAACTTA 38391 36 100.0 29 .................................... TCCTCAAAGATACGTAATACAGTTGTTTC 38456 36 100.0 30 .................................... GAGCATCTAACGAGAAAGAAGAAAGTGAAC 38522 36 100.0 30 .................................... ATTATGAACCAGAAGATGATTCTGATGTTC 38588 36 100.0 30 .................................... GTGAAGAATTAATGGAAATCGTTAATAATT 38654 36 100.0 29 .................................... AAATGGATGTATGGTGCTCGAACAGAATT 38719 36 100.0 30 .................................... GAAGATTTCTCCCCAAACTGCAGCACCTTC 38785 36 100.0 29 .................................... AGCTATCGAGTAGTGTTTGACGTAACGAT 38850 36 100.0 29 .................................... CGAACGAGTAAGAGAATTATTAGGGAGGT 38915 36 100.0 29 .................................... TTGACTTCTAGCATCATGTGAGTGATGCC 38980 36 100.0 30 .................................... TGATGAATATGAATGGTCAAATAACAACGA 39046 36 100.0 29 .................................... GTATCGGATAACGCAGGGGGTATAACAGT 39111 36 100.0 30 .................................... GTTTTCAAATTCTTCAGCTTTCATAGCATG 39177 36 100.0 29 .................................... TTAACTAACTTAATGACTGGCGTGCTTAT 39242 36 100.0 30 .................................... TGAAAAATTCAAAGAAGGTAAAGTAACTGC 39308 36 100.0 30 .................................... TTAGGGTGGTTGATGCCTTGTTGATGTTCG 39374 36 100.0 30 .................................... GCTAGTGAACTCATTGAATTAATTCTTGCT 39440 36 100.0 29 .................................... ATAACTTTAGATTGGGATAAGTTGAATGT 39505 36 100.0 30 .................................... TTGAATTAAAACAAAACATTTCGAACGCTT 39571 36 100.0 31 .................................... ATTTCACATCACCACCGTCAAAGGTAACAGA 39638 36 100.0 30 .................................... ATCGAAAGAGGTGAATATTAATATGAAACT 39704 36 100.0 29 .................................... TCATAAGGATCTTCAATTGCAGTAAATGT 39769 36 100.0 30 .................................... CGCATACTAGAGAAGCTTCGCAAATTCGAC 39835 36 100.0 29 .................................... AATAACTATTGGCGATAAACCCTGGACGA 39900 36 100.0 30 .................................... ATTAGCAGATGCTTTAATCAAGATAGCAGG 39966 36 100.0 30 .................................... AAAAAGCATTCCATTCATCCTCTGTATAAG 40032 36 100.0 30 .................................... ATTAGCAGATGCTTTAATCAAGATAGCAGG 40098 36 100.0 30 .................................... TGTTTACTTTAAAGGTTGGGGTATTTCAGG 40164 36 97.2 29 ...............................T.... GCTCTCGCATGGGAATGTTACAACGTGCT 40229 36 100.0 30 .................................... AAAAGAACGTGCATTAATCAATCAGACTGA 40295 36 100.0 30 .................................... TTTTGTAGGAAAAGATGTAGCAGACATTTT 40361 36 100.0 30 .................................... ACTAACTCAAAGTGAACTGTCAAATAAGTT 40427 36 97.2 29 ...............A.................... ATCTCAAAAGTACGGTAACGAATTCTTTC 40492 36 97.2 30 ...............A.................... TGACATATACGCTTTTATATTCGGTTTTAT 40558 36 97.2 30 ...............A.................... AGTTGATTCATTTAAGAAGATAGCAGTGAA 40624 36 100.0 30 .................................... GAATCAAGATATGTATCAAGATACTGCTTA 40690 36 94.4 0 .............................AC..... | ========== ====== ====== ====== ==================================== =============================== ================== 51 36 99.7 30 GTTTTAGAACTATGATCTTTTAGAATGAAGTGAAAC # Left flank : TTTAAAATTGATGTTCATAATGACTTTAGTCACTTAAGTGCAGTACAAGCGAGGAAAGCATGCATTGATTTGATGAAAGAAGAGAAGAAGGAAAATATTCTTTTTCTGTTGTTTCCTGAAGCAAATCTAGGTGTGAGTGATGTCAAAGTATTTATGGATTTAATTAAGAGTTATGGGATGACAACGATTATGGTTACAAGTCATCCGTATTTTATGGTAGAAGCGGATTGTTTAGCAATGAGCAAACGTAATTTGACATTATTTGATATTGGTCAGGTTAGAGAGGAATTCCGGTTAATGTTTCCAGGGGAAAAGGTAGATGAGAAAATCGTTAGACAGATTGCTATTAATGAATTTTCTCGACAATATTTTATTAAAGATGAGCGTTATATCAGATTTATTAATGAGTACTAGTTGTGTATAATAAATAGTAACTATAAAAAATCTGTTTCATTATCATTATAAAGAGTGGTTTATACCGCATAACTTCGTGTTTTGAG # Right flank : CTGCAGTAGCCAAATGAAATATATACACAAGTTTCAAACATTGAAATTTATTGTTATGAACAGAATTTTATCAATACCAACTTTAACAACTCAGCACTTGTAATACATTTTTCAACCTTTTCATTTCATTTTTCCCAAATTTCTTCTTAACATAGTCGTACGATTTTAGCCACTAAGCGTTCGAGGGGCTGCAGAAATAAAATGAGAACGATGTTGTGTGCTTACTGAAGGTTGTTACTAAAAGGGCCTGTCTTTGGCTTAACGACTGGGCGCTTATCAAATAAAAAAATGCTCGAACCTATACCTTGTAGTAAGGGTGTCGTAACCGATTCCTAATCGAATCGGTTTTTTGTGTATAATGAAACTAAAGACAAATATTAGAGGTGGCATATGAAGGTTCAAGCGATGTTTATTGGTAAGCCGAAGCAGCTTGGGGATGCGAGCGCGACGGATAAGATGCAGCAGGCATGGGTGTCGGCGATTAATCGTGATCGTGTTGA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAACTATGATCTTTTAGAATGAAGTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //