Array 1 93798-92256 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHWWB010000001.1 Limosilactobacillus reuteri strain Fn041 NODE_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 93797 30 100.0 37 .............................. CCGCCAATAAACCAGTTGCAAACAAGGCGCTTTTACT 93730 30 100.0 35 .............................. ATCGGCAAAGGTTATCCAGTAAGCTTCGCGACTAA 93665 30 100.0 36 .............................. ATTCTTTCAATCTGGTGTAATTCAAGCGGTACCTAG 93599 30 100.0 36 .............................. GTTCAGACGAACAGTGACATTCTTAATTTTACCCAT 93533 30 100.0 37 .............................. TTTTCACCTTTTTAAATATAAAACTTATTCTTCAAAT 93466 30 100.0 35 .............................. TTTGCTGCTGAAGTTCGTGCTGTACGTTCACCTGA 93401 30 100.0 37 .............................. AACGTTTGCCTTAAATTTATCACCATTAAGTGATTTA 93334 30 100.0 35 .............................. TGAATTTTGGATTTTCGGAGTCAGCTTCATGATAT 93269 30 100.0 35 .............................. CTCTAAGGTGGCCCGTTGACTGTGATAATAATTTT 93204 30 100.0 35 .............................. ACATTGTGGACGCGGTCAAAGAAGATGAAAAATTA 93139 30 100.0 36 .............................. TCTTCAAAGTTCCCGTTCGTCGTATCAATGAGGTTG 93073 30 100.0 36 .............................. TGAAATGCTCGATAACAATATTAATGATTTTAAGAG 93007 30 100.0 34 .............................. CAGGTAAAACGCTTCTTTGAATTTTTCATAATCG 92943 30 100.0 36 .............................. ACAACCTACGAAGAATATCAAGGGCAAGTAGTTGGC 92877 30 100.0 36 .............................. ATCCTTTATGATGTTTCATCCATTCACGTTTCGTTT 92811 30 100.0 35 .............................. ACATTAATGTGGTTAGGATCACCAATACTGTTGAT 92746 30 100.0 36 .............................. TGACACACGACAGGGCAGTTAAGCAGGCTATTTACC 92680 30 100.0 36 .............................. GAAGAATTTAAACAATGGTATAGAAATGCTGATTTG 92614 30 100.0 37 .............................. CTAATAATCTTCCCGTTTAATGTTCCATCTGGCTTAA 92547 30 100.0 35 .............................. TAGAATGCCCTGGTACGTCTTCAATTGGTTTTACA 92482 30 100.0 36 .............................. ATTGTTCAAGACAGTATCTATGATATGGATACGTTG 92416 30 100.0 35 .............................. TGAACTGAAATTGGTGATACTCTTGCCTGCTCACA 92351 30 100.0 36 .............................. AACTTAGCCGCAATTCCGCTTAGGGTATCCCCTGTT 92285 30 96.7 0 ........................A..... | ========== ====== ====== ====== ============================== ===================================== ================== 24 30 99.9 36 GTATTTATCTAATAGAAGTGGAATGTAAAT # Left flank : CAAGAATACATGCCGTTTAAGATTTGGTGGTAGAAAATGTATATTATTTTGGTTTACGACATAAAGTTAGATAAAGAGGGAGCAAAAATATTAAGAAGGGTTTTTAAAATATGTAAAAAATATTTAACGCATGTTCAGAAATCCGTTTTTGAAGGTGAAACAACACCGGCAAAGCTGGCTTCATTGAAAAAAGAACTTAAAAATTGGATTCGTAAAGATAAGGATTCATTGATAGTTTTTAAGAGTCCTAATAAAAAATGGCTTCAAAAGGAATTTTGGGGGATGGATGAAACAGATAAAACGTCAAATTTCTTTTAAAATGATCTGTCGAATATTCTTATTGTAATTTTAACGTTTTTACGACAGATGCAGTTTTTGTTATAATGGCGGTAAAGGGTCATCTTTACCGTTATTTTTTGGAATTACTTTCTTAATTCTACTTGTGATTGACATTTTATATGATTTGAAGCGTTGATTTAGCACGGTTTTAAGATGGCGGA # Right flank : CAGTTTTTGAGCAATTACTCAATCACCATGTAAATATTCATCTAATATGGATATCTGCTTAATCTAAATGACTTTGATGATGGCGAAATAATGAGCATGGAAGAAGTAAAAAAGAACGTGGCTTGGAAGATTGCGACCGCTTCTCACCGCAAGAAGAGAAATATCTTCGTAAAATGATGGAATATAAAGGAAAAATCTCTAACAATTCAAAAATAAAGGAGCAATCATCATGGCGCAGTTATTTTATAGTCCTGACCTGGCTGATCGACTACCTCATAATAATACTGGTAAGATTAGCCAAAAACCTTTACGACGGTGGCAGCTTAGTCCGGTAAAGATTGATAATAAAACATACTACCTATATGTAGAAGAGGAAACTGGTTTGCCAGTCTTTACTGAAAAATTAGGCGAGGGTAAATTTAGTCAAGTTGCCATTAACTTTCTAAATGAAATGCCCTTTTTGATTGATCCGCAACGTACTTGGTTAATGCAAAATGTTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTTATCTAATAGAAGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 116215-115717 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHWWB010000003.1 Limosilactobacillus reuteri strain Fn041 NODE_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 116214 36 100.0 30 .................................... ATTTCCTTGACAATTCAAAGGGTTACATTG 116148 36 100.0 30 .................................... TTACTGTATTAGTAAAGTTAATCATATCCC 116082 36 100.0 30 .................................... GCAGAGGAGATGTTATTGAACTAATGCTAC 116016 36 100.0 30 .................................... TGGGTGGATAGACATAAGTTGACCATGTTA 115950 36 100.0 30 .................................... AACCTTCAACAGCTTTATTCATTGCATCTC 115884 36 100.0 30 .................................... AAGTTTATTGAAGTTAGCTGATTATAATAT 115818 36 100.0 30 .................................... AACCTAATACGGGACATACGAGGGTCTATC 115752 36 91.7 0 ........................G.......T..T | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 99.0 30 GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Left flank : GAATAATAATTTAGCAACAATTTATTCAACGGAAATTGTAAAGTCAATAATAAAAAATTTAACAGAAGAGGATCGTCATTTGCTAGATGCTGAAGCACGTCGGCTTTATTCGAATGTTCAAGAAATTTTATTTATGACAGATTTACCGCTCGAAGTTCGTTACGATGGTGACATCAAACGATTATTAAATTATTGTAAGATTAAATTTTCACCATTAGTTCAGCAAAGCCCTTATGATATAATAAAAACAGATTTAAAGTTACATTTAGAATGTGCTGATAGTTCATGTGTTGGGTTAAGTAATGTCGCTAATTACCTAGATTCAGCTCAATTTAACGAACTACAACAACTAAACATTGAATTGAAAATTCCTGTTTTATTAATAGAATTCACAGAAATAGATAATCGTAAATACTATGGAAATGCGGATTTTTATTATATTGACAAGGATTTTGTTGATTGGAAGTTATAAACTATTAATTCAAAATTAGAAAATAATG # Right flank : TACACGTAAACTATAACAATCACAACGATGATATTTTTTGATATCCTCCATCACGTTTTCCCCGCCAACTTCAGCGGGGCTTTTTCATTTTCTTTTCAAACTAGTGTATAATATTTACTAAACCCATTACTAAAAGAGGTGAAAAATGATGGCGACAATTAAAGAAATTGCGGAAAAATCAGGATATTCACCAGCAACGGTATCGCGCCTTTTGAATAATGACCAAAATTTATCGATCAGTCCAAGCACCCGCAATAAGATAATGACGGTGGCTAACGAGCTTGGCTATTGGAACAACCACAAGAAAAACTCTCAGCAGCAACCAATTCGTCCTAATCTTGCTCTATTGTATCGGGTAAGCGGTAAAGAACAACTGCAAGATGAATATTTTGCGTTTTTGCGCAATGCAATTATTAAAGAAGTTGATGAAGCGGGAGCGCAAGTTGAAATCTTTAGTAATATCAAAGATTTAATTGCGGCGGCTGATTCGTTCCAAGGAT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //