Array 1 4712573-4710223 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB912877.1 Methylobacter marinus A45 MetmaDRAFT_scaffold1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4712572 29 79.3 32 TA...GT...AT................. GCCAAATCTTTATGTAGCCATGTTCCCTGATG A,AA [4712557,4712559] 4712508 29 100.0 32 ............................. TCAGGATTCAGCGCCGACTTGATGCGATCCAG 4712447 29 100.0 32 ............................. GCAGTAGGTTTTGCCTTCAAATAAATGGAACT 4712386 29 100.0 32 ............................. ATTTTCCAGCTCATTCGAAAAAAACTCATCCT 4712325 29 100.0 32 ............................. CCGGAGATCAGTACCGGCAGCCGCTTTCTTGA 4712264 29 100.0 32 ............................. AAATAGGTTCTTTCTTTAGATAAGGCGGTTTT 4712203 29 100.0 32 ............................. TAGTGATTTATCAGATTTTATTGATAGTCATG 4712142 29 100.0 32 ............................. GCGACGCAGACGACGGGCGATTAATCGGCGTG 4712081 29 100.0 32 ............................. CCTGTGACCTGCAGCAGCAGCTGCTGGACGTG 4712020 29 100.0 32 ............................. GAAGCGGAAGCGCGGCGCATCCAGGAAGAAAA 4711959 29 100.0 32 ............................. TATGAATAATAATAAAAATAATGAGAGACAGT 4711898 29 100.0 32 ............................. CCCCTCTGCAATCAACCCCTTGCACATAATAA 4711837 29 100.0 32 ............................. CCCATCCGCGACACGCGGGTATTTTCCACCAA 4711776 29 100.0 32 ............................. GCGGTATTATGATTATTTTTCATGAGGGTTTG 4711715 29 100.0 32 ............................. CGTTCGGCATTATCTCCGGCGGTCTGATTGCG 4711654 29 96.6 32 ........G.................... TGAACGTCGATAGGTAGCGCAGCATTTCCAGA 4711593 29 100.0 32 ............................. CCGGCTTTTATCACTACGCGCGAGGGAGTCAT 4711532 29 100.0 32 ............................. CGAGGCCGCGAGTGGCCCCGTTAATATTTCAG 4711471 29 100.0 32 ............................. GATAAGGAATGAAAATTCATGAATTAATATCA 4711410 29 100.0 32 ............................. TCCCCAATCTTAACTCTCAGAGTGCCGTTGCC 4711349 29 100.0 32 ............................. TTCAAACTTACCATAACCGCAGTACTTGATGA 4711288 29 100.0 32 ............................. CGGGGGCGGATTCAGGAACCCCGGCAATTCTA 4711227 29 100.0 32 ............................. ATAATTATATGTCGAAAAATCGAAATGCTCTT 4711166 29 100.0 32 ............................. GTCGGCAGATCGCTATATTCTGTGCTGTGCAT 4711105 29 100.0 32 ............................. TGTTCCCGGCGGTGCACACGCAAAATACCGAT 4711044 29 100.0 32 ............................. TACTGGTCGAAAAAATCCAGCGCGGCCACCAG 4710983 29 100.0 32 ............................. CGCTATGCGACAAGAACGGCACGGCAGACATC 4710922 29 100.0 32 ............................. AATCAATAAGTAATTCATTAAGACGCGTCAAT 4710861 29 100.0 32 ............................. ATGAATTAAACACTCTGTATTTTAATTTTATT 4710800 29 100.0 32 ............................. TCCAGATCGGACTGGAGCGGAACCACCCAGTC 4710739 29 100.0 32 ............................. GCATTATTAAAGCGGATGACATTGGCACACAT 4710678 29 100.0 32 ............................. GTTTTTCAATGCGCGGTTGGCAATCATGATGG 4710617 29 100.0 32 ............................. CTAGATGTTAAAGCGCACATTGCTAATTTAAT 4710556 29 100.0 32 ............................. CGACTCTGTCTTCTGATGCCGCGTTGTTTGCG 4710495 29 100.0 32 ............................. GTCTGTGTCCGGCGCTCAATCGCTGCCGGTAT 4710434 29 100.0 32 ............................. GCCGCCTTATAATCCAGATTCTAAAAATGTGA 4710373 29 100.0 32 ............................. CGCGTCATCCAGGCCGCCAAGGCCAACGCCGG 4710312 29 100.0 32 ............................. GCGACGAATAATAAAATTCTAGGCATAGCTAA 4710251 29 93.1 0 ...........................TT | ========== ====== ====== ====== ============================= ================================ ================== 39 29 99.2 32 CTGTTCCCCACGCCCGTGGGGATGAACCG # Left flank : CCATCGACCTGGCACTGCTCGCCCGGCACCATATCCAGCACCGGCTCATAGTAGCGGGCCTGCCTGACAGGGAGCTCCTGCTTGAGCGCCTGGATGTAACGCCGCACTGAACGGTCGGACACGGCCAGATCATCCACCTTGGCCTTCAACTTGCGCAGCACTTTCACGGCCGACAGGCCGGGATAGGTTTGCAGCAGTTGAATGATATAGCCGCGGTAATCGTCCAGCTTCTTGGTGCGGTCCGTATCGGCCAGCAGCGCCGCAATGGCAGGTTCCGTCAGCTTCAAATACTTGCTGACCGTGTTGCGGGAAATGCCCAATTGTTTGGCAATTTGGCGCTCCGATAAGCCATTGCCGTGGTTATGTAATGCTTTGATCTGATGGATCACTAGCCACTCCTTCATGCCGCTCCCTGAACAAAAGCCAGGGACTGTGGCAAATAATGAGATAAAGATAAAGGAAAAAGTGGCTCAAAATTGTTGGCCAATTCTGGCTCATTT # Right flank : GATGATAACCTGCTACGCCCCGCTTCAATCTGTCTCCATACCCATAAAAACAAACCTCGCCATGAAAAAAATCCCCAAACTATTCAAAAAAAACACCCCATCCACAGCTTAACTTGACACACCGGCAGCACAGCAAAATTTGACAATGAGGAGCTATGTATGCACACTCGCGGACAGTTTAAAAATGTAACACAGCAATATCAGACACAAACGCCCTGAGTCTGGTGCAGTCACAAATTTAAACAGGAGTCGCATTATGGGCGATACATGGCAGTCGGCCGGGGCCTGTTCCGGGTTTGAAGTCCTGCCGATTGGCGGGCGGTGGCGCGCCGGCCGTTCCAGTCACAATCTGATAAATACCAATCCTTTTAATGGCCAGACCCTGGTCGTGATGTTGCTGGCGTCCGCGCAGGATGAGGCTTATGAATCGGCGGGCGCGGCGCAGAAAGCCGGGGCGGCTGCGGCACCGGTGATCCGCGCTGAGGTGCTGCTTAAGGCGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCACGCCCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGCCCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 4720469-4718852 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB912877.1 Methylobacter marinus A45 MetmaDRAFT_scaffold1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4720468 29 100.0 32 ............................. GATATGGGGTTTGATGTTGATACAACGTATTA 4720407 29 100.0 32 ............................. CAGTTCGGCCAGCAACCACGCTGTTTTTCCTG 4720346 29 100.0 32 ............................. TGTTATCTTGACTGTATTACCTTCCTGTTCAT 4720285 29 100.0 32 ............................. CCCCCACGGGGCTTTTCACTTTGCCGCTCGCC 4720224 29 100.0 32 ............................. CATGCGCTACGCGCCCTGCTTTTTTTAATCAT 4720163 29 100.0 32 ............................. CAGCGCATGCAGGAGCAGTAAAACAATGACCG 4720102 29 100.0 32 ............................. CGTATATACACCAAACGTCGTGACCAGCCCAA 4720041 29 100.0 32 ............................. GCGGCTCTATCTGGGTAACAAAACCGAACTCA 4719980 29 100.0 32 ............................. CCGAAACTTCCCTTTACATTTTCATTAACTAA 4719919 29 100.0 32 ............................. GCAATGATATTGCCTAAAACGCTTTCATACAG 4719858 29 100.0 32 ............................. CGAATGCGCCCAATTTAGGGAAATAACAACAT 4719797 29 100.0 33 ............................. TGCGGATCGAGCCAGCGTAGACGCGAGATATCA 4719735 29 100.0 32 ............................. CTAATTCATTCAATTTTTTTATTAATAAAGCT 4719674 29 100.0 32 ............................. ATCGGTTTGATCTCTTTGAGATTACAGGTCGT 4719613 29 100.0 32 ............................. GCGCCAACCCGACCGCCCTAGCGGATGGCACG 4719552 29 100.0 32 ............................. CTTCAGGCAAAATTGATGCTCAGGCGAAAGCA 4719491 29 100.0 32 ............................. TCAGCAAGAGTTGATTAAGGATTTGCTGGAGT 4719430 29 100.0 32 ............................. TTCAACCGAGCCCGGCTGGATTATCCCAAGGC 4719369 29 100.0 32 ............................. CTGCTCAGATCATGATCGGCGCCCGCCACTAT 4719308 29 100.0 32 ............................. CCGCCCGTACCTGGCGCTTTCCAAACCCGTCC 4719247 29 100.0 32 ............................. CGGTTAATCAGGCGAGGGAGGGTATCTGTATT 4719186 29 100.0 32 ............................. GTCGTCGATAAGGTGACTCAAGAGGCGATGCG 4719125 29 100.0 32 ............................. CTGGGCGCAAAAATTACCGAGTTCGTGACGCA 4719064 29 100.0 32 ............................. CCCCCGATGTCCATGCTGCGTCACGAACTCGG 4719003 29 100.0 32 ............................. GCAGCGGGAGTCATTTTTGTAGTGGATGCGGT 4718942 29 100.0 32 ............................. CTGCTTTCCTGCCAGGGCCATACCAACTTTTT 4718881 28 82.8 0 ..................T.T...G-..A | AC [4718859] ========== ====== ====== ====== ============================= ================================= ================== 27 29 99.4 32 CTGTTCCCCACGCCCGTGGGGATGAACCG # Left flank : AAAATTATTCCCACCATAGAAGAAGTGCTCGCGGCCGGCGAACTGGAATTGCCGAAACCGGCCGAAGAATCGATTGCACCTGCTATTCCTAATCCTGAGAGTATCGGCGATGTTGGTCATCGTAGTTGAAAACGTGCCGCCGCGGCTGCGCGGCCGTCTGGCCGTCTGGCTGATCGAAATCCGTGCCGGCGTTTATGTCGGCGACTTATCGGTTAAAGTCAGGGAAATGATCTGGTCGCAGATTGAAGATGGTATTGAAGAGGGTAATGCCGTCATGGTCTGGACCACCAATACCGAATCCGGTTTCGACTTCATAACGCTGGGTAAAAACCGCCGCCTGCCGGTCGAACTCGATGGTCTCAAGCTGGTCTCGTTTTATCCTGTTGAAGATCAGAAGGATGAAAATGCTCTTTAACAATTTAGCTTTAAAAAATCCGCTTTTTATCGGTAGAAAATTGGAAGTGATTATTTCGCTCAATTAACAGTATGTTAAGATAAGT # Right flank : ATAATTTTGAGCCAGTTTCGGCCATTAAAATTGAGCCACTTTTTCCGGTTAATATGAGTTGTTTAGCTTCGCTTTCAGCCGATAACTTTCCCCTCCGAGCATAAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTACCATCAGAACTATCAACGGCCTAAGCCGTTGGATTCAACCGCCGGATGCGGAAAACCGCATGTCCGGTGGTGTGGCAGAGGTGACGGGCGCAATCCCGTCACCCCGAGCCGATCCGAGTTTATGAAAATCCCTGTCGACCCGTGAATGGCTTGCTTTCATGGCGACGAAGCCTGGAGGCGATGTTTCTGGCTAATAAATAAATGCTCTAGTCCTTCGCTGGTTTCTGGCAGAGAGTTTTATCGGAAGGCTTGGGATGGCTCTTGCAAGGATTCGCTATGCTTCGGTAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCACGCCCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGCCCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //