Array 1 635-2462 **** Predicted by CRISPRDetect 2.4 *** >NZ_PXNF01000003.1 Acinetobacter baumannii strain AB5 D60061-05_R1__paired__trimmed__paired__contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 635 28 100.0 32 ............................ AAAAAGAGTTAAGGGTAAATCTAAGGGTATTA 695 28 100.0 32 ............................ TTCAAACGCGGGTCGTATGGCAAGCCTGCGGC 755 28 100.0 32 ............................ TATATCACTTTTCCTGATTATAGCAAGTAATA 815 28 100.0 32 ............................ GTGTATGTACTCTGGAATGGATCCAGTAGACC 875 28 100.0 32 ............................ AGTATAAAAGCTTTGGCCGCATTTTTTGGAAC 935 28 100.0 32 ............................ TACGCCTGAAATGGTGTAGTTTGCATCTGACA 995 28 100.0 32 ............................ TAAAAACGACAAATGCACAATGGGGTATCTTT 1055 28 100.0 32 ............................ TTGCCAAATTGCGCGAGCAGTTAGGTATGGAC 1115 28 100.0 32 ............................ TACCACGTTCAACGATAGCAACGTGATTACCA 1175 28 100.0 32 ............................ ATGATCTTATCGACTAAGCCAATTTTTAAAGC 1235 28 100.0 32 ............................ ATACGTTCATTGAGCACAGGGTCATCAATGTA 1295 28 100.0 32 ............................ TTTCTGCATCCACACAACAAACATAAAGACTA 1355 28 100.0 32 ............................ TGATTGGTGTATTGAAGCAAGCGACTAGTTAA 1415 28 100.0 32 ............................ TTGTTGAATATCATTACTTATTAGGTGTGGAT 1475 28 100.0 32 ............................ AGCCTCATTAACGAAAGATAAATCACGTATGC 1535 28 100.0 32 ............................ AGAATCATGTTAACAAAATCCACTATAGATTC 1595 28 100.0 32 ............................ TTGCAGTGTGTTAATGAACATTGCCGTAACAC 1655 28 100.0 32 ............................ ATAGAAGAATCGGCAAGCGTATTCATAAACTC 1715 28 100.0 32 ............................ ATTATTGGTCAAAGATTGACTTAATATAATCA 1775 28 100.0 32 ............................ ATAGTAGTAATCGTTTTCAATGTGCTTGCGGA 1835 28 100.0 32 ............................ ATGAGTGAGTTTAAAGTCGGGGATAAGGTTGT 1895 28 100.0 32 ............................ TTAGCTCACATAATGAAAATTTGTCACTTTGA 1955 28 100.0 32 ............................ TGCGCGAAATGGTGCGAAATGGCGGCATGTTT 2015 28 100.0 32 ............................ GGTTGTACAGGTCAATGGTGCAACGCCCGTTC 2075 28 100.0 32 ............................ ATTCAGTAGGGAAAGCTTCGCCGTATGGATTC 2135 28 100.0 32 ............................ AGACGCTACACGATCCTTATCTAAAGCCAATT 2195 28 100.0 32 ............................ TAGCGGAAAAAGTCTATGAGATCATGAAGGCC 2255 28 100.0 32 ............................ ATGAAGTGTTTAATTGGTACTGTGGCGAACCT 2315 28 100.0 32 ............................ CTTATGTCTCTCAATGGTGGTATTGATGATGT 2375 28 100.0 32 ............................ GAACCAAGATCAATCGTAGTGTTCGGGTTAAT 2435 28 96.4 0 ...........................G | ========== ====== ====== ====== ============================ ================================ ================== 31 28 99.9 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : ACTTTAAAAATAGAAGCCGTTTTACGTACATTTGCCTGATAATCGGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTGAGATAGGGTAAATCAAGTGCTTGTTGTTTACTTAAACGAATCCCGCCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGTACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTTCCCGTTTTGTTATCTAGCCAATTTTTAACATATTATTTGAAAAATGAAAGTATTGAAGGAGAGAGTTGCAACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTAAGAAGATTAGGTTATATTTTTTAAAAATGGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : GAGTTTCTTCCAAAATTTAAGACGATGTATTTTGTCGTTAAAAGGTCGTATTAAACTGATTAAAGCTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGACATTCAGACTTTAACAATAAACTATGCATGTCATTCTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCAATTTTGGATAGCTATGCTATTCGTACAGGATATTCGTCTTGGCAAGCACCAATGACAATAGAAGGCTTAAAAGAAATTCGTAGCGCATTAAAAAAAGTAGCCACTCGACAAACTGCGGTAGCCGCTTACATTAATTTTGGTGTACGAAGAATGAAGCTTGCATGGGTTGTTGGAGCAAAACATAAATTTGCCCATGACGGTGCATATCCAGTTGCATCGACCAAGAAACAGCAAAAGTTATTGATGTTAGATGAATGGGTCAAAGTAAGTAGCTTATTGGCAGGTGCAGCAGGGGACATGCATGATATTGGTAAGGCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //