Array 1 146173-146860 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANF010000002.1 Vibrio metschnikovii strain M9G.2 Scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 146173 28 100.0 32 ............................ TTAAGCTCATCGTTGATTTAGGCGAGTCCTTT 146233 28 100.0 32 ............................ AGTGCCTGAGAACGACACATAAAAACCGAAGT 146293 28 100.0 32 ............................ CATTGCCGCCACCGCCAAAAGAGCCAAACTGC 146353 28 100.0 32 ............................ TGCTGTTCCATTGTGCCAGATACTCCATCGAC 146413 28 100.0 32 ............................ TGTCTGGGGTTCGTGATCTCCCCACGTCAAAA 146473 28 100.0 32 ............................ AGACATTGAGCCTCTTGTTTCAGACGCTATGG 146533 28 100.0 32 ............................ TTTAATGGCCGCAGCAAAGTCAAACTTAACGT 146593 28 100.0 32 ............................ AGTCATAACCCGCAATGTTTGACCCGTGAATC 146653 28 100.0 32 ............................ AGCCATAACGTATAGAATTGCTAGAAGCTTGT 146713 28 100.0 32 ............................ CCACGAGTAGAGCGATGAATTCCCGTAGTAGC 146773 28 100.0 32 ............................ GATAGTGTCATTTCATACGTTTCAGGTTGACG 146833 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 12 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGATGTGACTTACGTAAGCTTTGTACGCAAGCAGGTGAAATCGCCCGAGCGAATAGAGCGGGATATGCAGCAAAAAGCCGCGCTATGGGCCGAAAAATCCGGTAAAACGCTGGTGGAATGCCTAGCCGATTTGCAACAAAGCAAGCCGACAGCCTTATGCTCTTTACCGTTTATTTACTTGCATAGCCAGCAAACGAAGCAGCGCTCTCCTGAAAAAAGCAGTAAGTTCCCGCTGTTTATTCAGATGCAGCAACAAAGCACATCGCAAGACGGGGCCTTCGATTGCTATGGTTTGAGTAGCAAAGCGAATGGACAATCAGCATTGGCAACCGTCCCGTATTTTTAAATTGAACGAAAAAGGGTATTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTAAATACAATAAGTTACAAAGGGTGGTTTTTTATAAGGTAAAAATGCAATTTTTATCCTAACTAACTGTTGTAACTTATTTTTATTGATTTATTCTATA # Right flank : ACGCCGGATTCGATGGAATCAAACTCCCGCCAGTCATCCCCGCGAAGGCGGGGATCCATTCTGCAACAGATGCCAAGTGCTTAAGTGAGCGATCAATTGGCCACAGATTACTGATACTTCGCATAGATTCCCGCCTACGCGGGAATGACGGTTTGGTTGTGGTTTTGGGAGCTGAACTCCATAGATCCCCGTCATGTTTTGCCTGCTACTGCTGTGAGGCAGGGAAATGAAGGCGTAGCGATCATCGAAAACTGATCCACTAAATACACTTAGTCAGCATAGATTCCCACCTTGAGGGCAATGATGCTTGACGCTTTGAATACTCGATTGTTCACCTTGATTACAAGAAAGCGTGAGTTGTTTAACAATATGTGCGCCTAATTCCTTAGACACTACGTTGTATGATTGATGTGAGTGGTGGAACACATGAGCTCCCTAACGTTACCTTGCCAGCGAGAGATTGATCTCTCATCAGAGTTAAACGTCGTATTACAAGACAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [81.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 95994-96141 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANF010000012.1 Vibrio metschnikovii strain M9G.2 Scaffold12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 95994 28 100.0 32 ............................ TTCTTAAAAAGAGCCTCGAAAAATCATTGGAG 96054 28 100.0 32 ............................ GCGCTGCAAAAAAAGCGCATTAGCCGGCGCGC 96114 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================ ================== 3 28 98.8 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TATACAAAAAGTTAGAAATGATATTGTTCATAAAGGGAAAGCCTGTACAAAAAAAGACGCAGAACTAGCAGTGGCACTATTTAATGAGTTTGAAATATTATACCGAGATGTTCTTCATTGTTTAGGGTTCACCATAAGCTTAGAAAATCTTGTTTATACAATTAAATGTGCAGATGAACAAGAACTGTCGAATGATGACGATTGTCCGTTCTAGTGCATGTATTTAAGTCACATAACAAACGCTTCAAGAGGGACTTCCAACGCGCGGCATTTTTATTGTGCGTTGATTTCGGTGGTTCCAGTGTTATGCGGAAGCTTGGTAGTCGCGTTGTCAGCCCCTTAAGCGGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTTAAAAATAAAAGATTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAGGTTACTGATACAGTTTCATA # Right flank : ATATTGGTACTTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTTAAGAGGGATTCGCAACGCGCGGCATTTTCGTTATGCATTGATTTTATTAGTTTTTAGTGCAATGCGGTAAGTTAGTCGTTGCGTTGCTCACCCCTTAACGCGGCGTTATGCTTTATTGAGCCTCAGCAAAATCAATATACAAATTTTAATAGGAAAGCTTGATCTGATTTTAGCGGTTTTTCATCCTAATTAATTGATAATATGAGTATATTGTTCTTTTTGGTGGCTATTGAAAGTTGAACGATGCTCTTGCTTTTTTAGCCAACTCTGCTCTGACAAATTGTGTGCGTAAAAAGTTCGATTGATGCTGTAAGGTCTCTTTCTTTGTTGTTGCTGGCTCATTGATTCCACTGGCTATTTCGCTTCAGCATGTTGGGGATCTCATGAACATCTTACTTGCTGACAGAGTTTGGTTAGCGCAAGTTTATCGATAATTTTGCGTTTTTTTCCGGC # Questionable array : NO Score: 5.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 97739-98186 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANF010000012.1 Vibrio metschnikovii strain M9G.2 Scaffold12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 97739 28 100.0 32 ............................ AGTAACCAGCGTAAACGGTTCGCTCTGATAAT 97799 28 100.0 32 ............................ ACAGACTGCAGCGCCGCTAGAGGTGAATTCAT 97859 28 100.0 32 ............................ GTACAGAATAAATAACTGGTTTGATTTATATA 97919 28 100.0 32 ............................ GGACTTCTTAACATTCCGGTTCCATGCGCCAA 97979 28 100.0 32 ............................ TCGATGCCCGGGTAGTGCTTATCGATTTGCTC 98039 28 100.0 32 ............................ TGAAATCATTGAAGGTGAAGAGAAAGACAAAT 98099 28 100.0 32 ............................ GCTAAATCCCATTATTGTTTTCATAATGTTGA 98159 28 92.9 0 .............C..........A... | ========== ====== ====== ====== ============================ ================================ ================== 8 28 99.1 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GCGAGCACAGATGAACAAACTCAGTTTATCGGTAATCAAACTGGCGGTAGAGTTTTCTTATTTCTACAAACGAATGACTTTTGGCGAGATTATGAGTTGATGAAAGAGAATGGTGTTGTTTTCAACGAAGCGCCACGAATTGAAGCGTATGGAACGGTTGTAGTATTTCAGGATCTTTATGGAAATAAGTGGGATTTGTTGCAATTAAGCAGCGATCATCGTTAGTACGCACATAACAAACGGTTCAAGAGGGACAACCAACGCGTGGCATTTTTATTATGCGTTGGTTTTTGTGGTTACAGTGTTATGCGGAAGCTTGGTAGTGGCGTTGGTTGCCCCTTAACCGGGCGTTAACTGGCAATAAAATTACCCATCTTTTTTCGTTGAATTTTAAGTCATTGATTTATATTGATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAAGTTACTGATAGAGTTTCATT # Right flank : AATGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCTTTGATTTCATTAGTTTTCAGTGCAATGCGGTGAGTTGGCAGTTGCGTTGCTCACCCCTTAACGCGGCGTTATGCTTTATTGAACCTCAGCAAAATCAATATATAAATTTTAATGGGAAAACTCAGTCTGATTTAGAAGTTTTTCTATTCTAATTTATTGATATTATGAGTTTATTGTTCTTTTTATGGTAACTAAAAGTTGAACGATGCTTCTGTGTTTTTGTCGGGTTTTGCTCTGATAAATTGTATACGCAAAAGATTCAACTGTTGCTGAAAAGTCTCTTTATTTGGTGTTACTGGTTCATTGATTCCACTGGCTATTTCGCTTCAGCATGTTTGGGATCTCATGAGCATCTTGCTTGCTGACAGTGTTTGGTTAGCGCAAGTTTATCGATGATTGTGCGCTTTTTTCCGGCTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //