Array 1 206637-206486 **** Predicted by CRISPRDetect 2.4 *** >NZ_SZXH01000063.1 Citrobacter sp. wls621 contig1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 206636 29 100.0 32 ............................. CGCATAGCCGAGCTGGAGGCGCGGACGGTGAA 206575 29 100.0 32 ............................. TCTCTGGCCGCGTTTAAATACTCAGTCGAGAA 206514 29 89.7 0 ............T............T..A | ========== ====== ====== ====== ============================= ================================ ================== 3 29 96.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AACCGGCGCTTAGATACAACAACCTGCCGTAATCCATGTGTTCCCCGCGCCAGCGGGGATAAACCGATGATCGGCGGCAGCGATAACACTAGCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTTCCCCGCGCCAGCGGGGATAAACCGGCATACGGCAGGATTTACGAAATTACTATCAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGATATGATGTCAGGAAGCGGCGGCGCGTCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGCGGGGATAAACCGGTTGACGCATGACACAGGTTAAAACTGAAACA # Right flank : CTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTACCCGCCTTTGCCAGTTCTTTCACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCCGCGTTGTCGAAGACCTCTGCATCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGCGCCCGGTCACGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTTC # Questionable array : NO Score: 5.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-14.00,-14.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 208182-207517 **** Predicted by CRISPRDetect 2.4 *** >NZ_SZXH01000063.1 Citrobacter sp. wls621 contig1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================================== ================== 208181 29 100.0 32 ............................. GTGACGAGCTACTTAAACAAATCGAGGAGGAA 208120 29 100.0 32 ............................. CGCTATGCGTTGGGCCTGATCATGAGGCGTGA 208059 29 100.0 32 ............................. CTTGGTTCGGATCATATTCCACTCAAATTGAT 207998 29 100.0 32 ............................. CACGCCGGCGCGGTCGCTTTCGCTCTTAAGAC 207937 29 100.0 32 ............................. CTGACGGCCTTGCCTGGCTTGCCTTTGACCTG 207876 29 100.0 32 ............................. CCGGCTGTGTCCATGATCGCCAAAAACGCAGA 207815 29 100.0 58 ............................. GATAATATTGCGCCACGACTCATAGCGGCTTCAGGGGAGGGAGCTGGAGAGATATCAC 207728 29 100.0 32 ............................. TAAAAGCCCTTCCCTTCAGTTCCTGCGTCAGT 207667 29 100.0 32 ............................. CTGTGACACGGACGGTATCGCCAACACCTCCG 207606 29 100.0 32 ............................. CCGGAATTATATTTTTGGCCCTGAAACGTCAG 207545 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ========================================================== ================== 11 29 100.0 35 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGACGCTGGCGAAATAGACCCTCCGCAGCCTGCGCCAGATATGCTGCCGCCTGCAATACCGGAACCGGAATTGTTTGGAGATGGTGGTCATAGGGGGCGTGGTGGATGAGTATGGTTGTCGTTGTAACGGAAAACGTTCCGCCGCGTCTGCGAGGGCGTCTCGCCGTCTGGCTGCTGGAAATTCGTGCGGGTGTTTACGTTGGTGATACCTCTAAGCGAATTCGGGAAATGATTTGGCACCAAATCATACAGTTGGGCGGAGCGGGAAACGTTGTGATGGCCTGGGCGACAAACACGGAGTCAGGTTTTGAGTTTCAAACCTGGGGAGAAAATCGCCGTATTCCGGTAGATTTGGATGGACTTAGACTAGTGTCTTTTCTTCCTTTTGATAATCAATAGGTTGAGTGTTCTTTAATAAAACGGAATTGTTGTTCCCAAGTTGGTAGATTGTTACTTGATGAAAATTGCAATAGAAAACAGTTATATATATTTAGT # Right flank : TTTTTCCAGTGCCCGGACTTATGCACAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAGGCCCGTCGTTTAGTGTTCCCCGCGCCAGCGGGGATAAACCTTACTAAAATTTCTTATTCCGTAGCGTCAGCCCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGCTTAGATACAACAACCTGCCGTAATCCATGTGTTCCCCGCGCCAGCGGGGATAAACCGATGATCGGCGGCAGCGATAACACTAGCGCNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.10, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [25.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //