Array 1 733559-734577 **** Predicted by CRISPRDetect 2.4 *** >NZ_MDTQ01000001.1 Terasakiispira papahanaumokuakeensis strain PH27A scaffold00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================================================================================ ================== 733559 28 100.0 32 ............................ ATGGGCCGTCTTAAATATTTCACTCAAAACCG 733619 28 100.0 32 ............................ GGTTTCAGCGGGATCATCGGCAAGCTGATGAA 733679 28 100.0 32 ............................ AGCTGCGGGCGATGCAGGACAGCTACTACGCT 733739 28 100.0 32 ............................ TGTGCCGATCTGGGCACCGATATAGCCGCCAA 733799 28 100.0 32 ............................ ACGATGGGCGGGGTTAGGGATTAGATATTCGC 733859 28 100.0 32 ............................ AGCGCGCTCATTAATCTCCAGCGCTTTCTTGG 733919 28 100.0 31 ............................ GCGCAACATCTGAAATTACAGCACGCCCTAT 733978 28 100.0 32 ............................ GCTGAGCATCACTTCTGCAAATCCGCGCAACA 734038 28 100.0 32 ............................ GTCTTGCTTCAGCTCAATACTGGGCTTCAGCT 734098 28 100.0 32 ............................ ATAACGGCATAATGTTTAGCATCAAGGATGCG 734158 28 100.0 32 ............................ GTTGTCAGTCGTTCGGATCTGAACCAGCATAT 734218 28 100.0 32 ............................ TGGTAGCGAACATTCAGTGGCAGACGTATGGG 734278 28 96.4 32 ...........T................ ATGGGCGACGAACGCCTGGCCGAAATCATCGA 734338 28 100.0 32 ............................ GCAATAGAATGTGGCCTCGTGGCCACGATAAA 734398 28 85.7 124 .............T.........G..GG TTTGAGTGGTTCGGGGCGTATGGATTCGCGGCCAAGGCCGCTCCTACAGTTGCTTGGGAGTTGTAGATACTGTTGAGCAGGCAGCTCAGAAAGCCGAGTGGGTCAACGTCACGAACCCCACCAA 734550 28 89.3 0 .......................G..GG | ========== ====== ====== ====== ============================ ============================================================================================================================ ================== 16 28 98.2 38 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CCGGCTAGCGCAACTCATGGAGACGCCATGGCTAACGGGCATGCGAGATCACGTGCAACTGAGCGCACCGCTCACCGTACCGGCTGAAACGCGCCACATCCAAGTGATGCGCAAACAACCCAACTTAGGTGGCCCCAGCCGGGTGAAACGTTATGCCAAGCGTCACGGCATCAGTGAATCCGAAGCAGAGGCCCTCTACGCACAACTGGCCACACGGCGGCTGACACTGCCTTTCGTCACCCTCAACAGCCGTTCTACGGGCCAGCGCTTTAACCTCTTGATCGCCCATGGCAAACCTCAAAAAACCGCTCAAAGCGGCCCTTTTAACCACTATGGGTTAAGCCAACACGCCACCGTGCCTTGGTTCTAACCCTTTTCTGGCCCACCCCAGGGTGGGCCAATAAAATCAAGGTGTTACAACGCGGCCTTAAAAAAGGGTCAACTCCACCGAATTCATCATCGCTCTTTAACAAACAACGACTTAACCGTGATAACCTCTA # Right flank : GTTTGAGTGGTTCGGGGCGTTTGGATTCGCGGCCAAGGCCGCTCCTACCAAACCCTCTTCAATCTCTGAGGCTTGTATACCTTTCGCGGCCAAGGCCGCTCTACAGTTGCGTGGGAGTTGTGGGCGCTGGGGGCCGTTTTTCGCCTTCAAGCAGGCGCCTACTGTGGGTTCAGGGGTTGGCGTTCGACATCACCCCCTCTTCGTGACCAACGCTTTGATGTCGATCGCATCGAGGGGGCGGAGGGGGTATGCTCCATCGATCTGAATGCTGTTCATTAAAGGATACTCGATGTTATGAGCCTGCTGGATCAAAGAGCGGCCTATTTAAATGAGGTGTTGGTGTGTGGGGGTATTCGAGCTGCGGCTGATCAGCTGGGAGTGAACCCTTCTGTGGTCAGTCGTCAGATCCGTCGTCTTGAGGCCGAGGCTGGTATGGCGTTGTTGGAGCGTCATGGCCGTCAGGTTAAGGTGACTGAGGCCGGTGAGCTGGTGGTTGAGCA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //