Array 1 85849-87469 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJQS01000009.1 Lacticaseibacillus rhamnosus strain LR-B2 contig_9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 85849 36 100.0 30 .................................... AAGAAACGATCCCGAGTTTCTGGATTGCTT 85915 36 100.0 30 .................................... TCATCAGTATTCATGGAAATATAGGATGCT 85981 36 100.0 30 .................................... ATCATCGAATCTTTGGGGACCTTACCACTT 86047 36 100.0 30 .................................... GATTGTTTCGGTTGCTTCTGTGATGCCACC 86113 36 100.0 30 .................................... ATGACTGGTTGCCGGTAAGCGATGAGTTCA 86179 36 100.0 30 .................................... CATACTTGTATGAGCACTTTGACTTGTCAA 86245 36 97.2 30 ....................T............... ACCGTTTGTGTTGCATGAATATGATCACTA 86311 36 100.0 30 .................................... AGGTGCTATGCCGCTTGGCATGACGATTGA 86377 36 100.0 30 .................................... AATAATATTGTGCCAAAAGGTAGTATTCTA 86443 36 100.0 30 .................................... TCCAAGGGCATTCCAGATTGCAGAAGCCCC 86509 36 100.0 30 .................................... GGGTGATGCTGACAAGATCAAGACGGCTGT 86575 36 100.0 30 .................................... CGCCTTACGGGCGACAGCTAGGCCTATGGG 86641 36 100.0 30 .................................... AGATCGAGCATTACGGCTTGCAAGACTGCG 86707 36 100.0 30 .................................... ACAGTTGAGAAAAGAAAATACGCATTTAAA 86773 36 100.0 30 .................................... AAAAACACAAATGGCCGCTGCCACCTTATG 86839 36 100.0 30 .................................... AAAAAAGCCGCGGAACTTCTCGGGCTAGAC 86905 36 100.0 30 .................................... CACAGTGCCATTCCACAAACCCGACAGAAA 86971 36 100.0 30 .................................... CGAGCTTGCGGCCAATATCAAGCTATATGC 87037 36 100.0 30 .................................... GTGTGATCATCATTACCTCTCTGCCACTAA 87103 36 100.0 30 .................................... ATCGCATACTTCATGATGATTGATGCCAGT 87169 36 100.0 30 .................................... CTGTGTTCTCACGTGTCAACAATTATTTCA 87235 36 100.0 30 .................................... TTGTGGTGCCAAAACGGGTTGTTGTCGAGA 87301 36 97.2 30 ...................................G TTTCAGCAAATATGACGTCTAACATGCCTC 87367 36 94.4 30 ..................................AT ACTTGGAAAAGTTGCTATGCAGTTTGAATA 87433 35 83.3 0 .......................AA.C...-..T.A | AA [87454] ========== ====== ====== ====== ==================================== ============================== ================== 25 36 98.9 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Left flank : GAGCTGGATTTGGACAAGTTATTCCAACGCTTGATCATCAAGAAGGTAAGTCAATTGATAGAGGATCGGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAAGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTAAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTACCAACATCAGTCATTATTTAGATGTTGATAGTTTGAACAAGCTGTTAGATCAGGTTAAGGAAACATCGTTAGAATTACTTCTCATTGAATTTTCGGATGTCGAACGTAGAAAGTTTTTTGAGAGGTGCCAGTATATCTATATTGACAAAGATTTCATGGATAGCCGTGAACTGATTGATTAAGAGACTGTGTGAAAACACCG # Right flank : AAACCTCACCCCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCAATGTCAAAAGCGAAACTAATCCTTTCCCCAGCCTTTTACACTGATCTCAAAGAAATCCGTCACATGTATCAACAGGCGTTCAAATCCATTTACGACAAATATCAAGATCGGGAAACCAACCCCTACTGTGAATCGTTGGAAAGCTTACAGAAAAAAGTTCAAACGGCATAACAATGCCTTCTTCTTTATAATCGTTAAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCGCAAAAATTCGGCAGTCCGTATTTCACCATTTTTAATCTTGCCGTCTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCTAAATTGGTACATTTGTATCGTAAAGTCGGCTTTCAGCAGCTGCCAGATCGGGAAACAACGATTAATGAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //