Array 1 179108-173531 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABGCC010000007.1 Novosphingobium sp. SG754 Ga0365359_07, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================================================== ================== 179107 32 100.0 34 ................................ ACCACGATCTCGGCCAGCGAGTGGGAGTCGAGCC 179041 32 100.0 35 ................................ GTGGCTCCAGCGCCGCCAGAACGCCGCCAAGCGCG 178974 32 100.0 35 ................................ CCTGCTGGCCTGGGCGTCGTCGTCGGCGCTGTGTC 178907 32 100.0 35 ................................ ATCATCAGTGAGACGGGCCATAATCAGGCGTGTGG 178840 32 100.0 34 ................................ AGCCCCTGACCCTAACAACCTTGCCTTGCACCCC 178774 32 100.0 34 ................................ GTCTATGTGGCGCTCGCCGCAAACCGGACAGGTA 178708 32 100.0 33 ................................ GGCGCACAGGCGGTGGATCCAGTCACCCATGGC 178643 32 100.0 35 ................................ CTCAACCCGCCCGCCACCGAAGAGGTCGCGGGCGT 178576 32 100.0 35 ................................ GTCACGCCGTGCTGGCCGTTCCCACGCTACGACTT 178509 32 100.0 35 ................................ CGGCTGGATCCGGGGTGCAGAAAGTGGGCGGCCTC 178442 32 100.0 34 ................................ GGTGAACTGGGTGCCGACATAGCCGACCTGCACG 178376 32 100.0 34 ................................ CCGTTCTACACGCTGCCGTTGTCTGCCCAGGTGA 178310 32 100.0 33 ................................ GATTACGAAGCGCCCGAAACCACCACCATGACG 178245 32 100.0 35 ................................ CGCGACCTGGCGACATGCCGCGCACCAGACGGCCC 178178 32 100.0 35 ................................ ATAGAGCATGGCAATCGCCCCGTCGGCATCTTCGT 178111 32 100.0 34 ................................ ACCTCGTCAATCACCGCGCTATAGTCGTCGTCGT 178045 32 100.0 34 ................................ TTCAAGGCGTTGCCCAACTATATGTTCGACCCCC 177979 32 100.0 34 ................................ GTGTCCGGGATCGTGGACGCTGCCGCCGCGCGAG 177913 32 100.0 34 ................................ GTTGCGGGGGAGCTGGGGCAACCTTCCCCACCCC 177847 32 100.0 35 ................................ CTGGTGTCGGGCAGCATCGGAATCGAGGCCAAGGT 177780 32 100.0 34 ................................ GAGGGCAAATGCGCCTATTGCCCAAACGATGCCA 177714 32 100.0 35 ................................ ACGACATAACTGGGGGAGACCAGGCCTATCGTTTT 177647 32 100.0 36 ................................ AGCTTTCAGCCCGACCGCTGGCTGGGCGACGTGGCC 177579 32 100.0 35 ................................ ACTTGCGAGGCAAAAGGTTCTGCGCGCGTCACCTT 177512 32 100.0 34 ................................ CACTTTTGATGGGGCTGCGTTTCGGCAAGCGGCA 177446 32 100.0 34 ................................ GGATAAAGGGACAAGGCGGCGTTTGGCCGTCATC 177380 32 100.0 34 ................................ AAGAACAATATGCGGTTTAGCGGCATCCTCTCGA 177314 32 100.0 34 ................................ GACGATCAGCGCATGCGCGGCGATGTGATCGAGT 177248 32 100.0 35 ................................ TGGGAGAAGCGGGCCGATCCGGTCATCACCCTGGA 177181 32 100.0 35 ................................ TGCGATTACCCAGCGCGTGGAGAATTTCGAGCAGC 177114 32 100.0 34 ................................ TTCATTGGCTTGGGCGTCGGCCACGATGCGCTCA 177048 32 100.0 35 ................................ ATCGAAATCGACGAGGACAACAACGTCTCGATAAA 176981 32 100.0 35 ................................ GGCAAGACCGTCGCGATCACGTCTGGCCTGACGCC 176914 32 100.0 34 ................................ TTGGCGTCCTGCGTGATCGCGGGGCGGCCGGCGC 176848 32 100.0 35 ................................ ACGCGCAGTGATTGCAGGGATACGGCGCGATGGCG 176781 32 100.0 34 ................................ ACGGCGTGGTGTTGCGCGGGCCTGGTCTGCGCGG 176715 32 100.0 35 ................................ AGCGCGTCGTCAATGCGCTGCCACAGATCGGGGCG 176648 32 100.0 34 ................................ CTGTTGCTCACACCCGCACCCCCGACCCCCTGCT 176582 32 100.0 36 ................................ ATCGTCGGGTTGGCGATCAGGAATGCCACGAAGGCA 176514 32 100.0 35 ................................ TCCCGCTCCGCGTAGGCCTGTGTGAGGGACGCCAT 176447 32 100.0 34 ................................ CTGTGCAGGAAAAAGGTGGGAATAGTCGGGGTAA 176381 32 100.0 35 ................................ GTCACGCCGTGCTGGCCGTTCCCACGCTACGACTT 176314 32 100.0 35 ................................ CCGCTGGATCCGGCGTGCAGCAAGTGGGCGCCCTC 176247 32 100.0 34 ................................ GGTGAACTGGGTGCCGACATAGCCGACCTGCACG 176181 32 100.0 34 ................................ CCGTTCTACACGCTGCCGTTGTCTGCCCAGGTGA 176115 32 100.0 33 ................................ GATTACGAAGCGCCCGAAACCACCACCATGACG 176050 32 100.0 35 ................................ CGCGACCTGGCGACATGCCGCGCACCAGACGGCCC 175983 32 100.0 35 ................................ ATAGAGCATGGCAATCGCCCCGTCGGCATCTTCGT 175916 32 100.0 34 ................................ ACCTCGTCAATCACCGCGCTATAGTCGTCGTCGT 175850 32 100.0 34 ................................ TTCAAGGCGTTGCCCAACTATATGTTCGACCCGC 175784 32 100.0 34 ................................ GTGTCCGGGATCGTGGACGCTGCCGCCGCGCGAG 175718 32 100.0 34 ................................ TCGTACATCGTAAAGCCCCCAGCCCAGCAGGATC 175652 32 100.0 35 ................................ GCGCCCGAAAGGCTGCGCAAGTGGAGCGAGAACAA 175585 32 100.0 35 ................................ TACCGCGTGCAGGTGGAAGACTTGACGATTACCGG 175518 32 100.0 34 ................................ CGCCACATGATTGCCGCCGCGCCCCGCGCCCGGC 175452 32 100.0 34 ................................ AAATTGAGTTGCAGCGCTCACTGCTGGGGGAAGT 175386 32 100.0 33 ................................ GTGGCCAGGGGCTGAACGATCTCGAAATCAATC 175321 32 100.0 35 ................................ TTCGGACAAGACGCCGCGAACCGCAGCATCAATTG 175254 32 100.0 35 ................................ ACGCTCAACACGGGCGTGGTTGATCCCCTCACGCA 175187 32 100.0 33 ................................ CATTTTCGACGATCGGCATAATTGGGTGAGGGC 175122 32 100.0 33 ................................ TGCAACTCAACTGGTTGCTGAAAAGTTGGCAAG 175057 32 100.0 34 ................................ TGATCCGATTGCACGGCGCCTTGTATCACGTCCG 174991 32 100.0 35 ................................ ACGCAATTTGTGGCGGCGTTTGAAATGGTGGGGAG 174924 32 100.0 34 ................................ TTACTATCCGGGGTTATGCGGGTCCGAACGATAC 174858 32 100.0 34 ................................ GTCAGCCAGCGTTGTGCGCGCGGCCTGAGTGGCT 174792 32 100.0 34 ................................ AGAAATGGGTTCGTCCGCTGCCGCGTGCCAAAGT 174726 32 100.0 35 ................................ AACGGCAACGGAGAAGTTGCACACTTGATCGTCGT 174659 32 100.0 34 ................................ TGCGCCCAATGCAGGCGAGCGTTCGGGCTCAGTC 174593 32 100.0 34 ................................ GGGATGTGGAGCATTTAGGCCTCCACCGGTTCGG 174527 32 100.0 35 ................................ TCACACCTCAAACGCCCAACGAGGCAGCATGACCG 174460 32 100.0 34 ................................ GAGCGACTGGCGCGCGCCAAACGTGCGCTGATGC 174394 32 100.0 33 ................................ TGCCTGATGCTGAGCCCGAGGGCGTCAAGCCCA 174329 32 100.0 34 ................................ CACATCCTGCGTGGCCTGGCCGAAGTGTTCTGCG 174263 32 100.0 68 ................................ ACCGCGCCCGATCGCGGGCTTACCATCCGCAAGTGTCGCCCCCTACCGACAATGCCCTGGCGAGCCTC 174163 32 100.0 33 ................................ CCGCAACGGCGTCTCGTCGTGCTCAAGGACTAC 174098 32 100.0 34 ................................ CAGCGCCTCGACGTGGTTGCGCAGGCGATCATCA 174032 32 100.0 35 ................................ ATTTGCAAGACCGTAGCGAATTTGCCGGCCATAAT 173965 32 100.0 35 ................................ GCGCGGGAGTATCAACGCCTGCATGCCAATTTCGC 173898 32 100.0 35 ................................ ATGCGCTTGATGCCGGCAACGAACCGGCTGATGCC 173831 32 100.0 36 ................................ CAGACCTGTGTCGAGGTGATCGATCCCGACCGGCTG 173763 32 100.0 36 ................................ GAGCAGTGGCAGCGCAGCCTTCTCAGCCTGCGCGCC 173695 32 100.0 35 ................................ ACAGGCTCGATCAGCGGGACGACCTTGACCGTCAC 173628 32 100.0 34 ................................ TGCGCATAGGCCAGCGCCCGGGCAGGGCCTTCAT 173562 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================================================== ================== 84 32 100.0 35 GTCGCCCCCTGCGCGGGGGCGTGGGTCGAAAC # Left flank : AGGCGATGCTGGTTTTGATCACCTATGACGTGAATACCCAAGACACGGCCGGCAAGCGCCGCTTGCGCCGCGTTGCCAAGGCATGCCAGGATTTTGGCCAGCGGGTGCAGAATTCGGTGTTCGAATGCGAAGTGAACCCGGCGCAATGGGCTGGTCTGAAAGCGGCGCTGGCCCGCGAAATCGCGCCGGAAAAAGACAGCCTGCGCTTCTACCAACTCGGCGCGGCTGGCAAGCGCCGGGTGGAACATATCGGCGCCAAGCCAGCACTCGACCTGGATGGGCCGCTGCTGTTTTGAAAGGCGGACGGGACAAGCTTGGGCATCGGCGCGAACCTCTAGCTGCCCGCAAAACACTGGCATGTTCGCGGAAGCGTAACTGCATGAAATATAGGAATGCGCCCGGTTTCCGCCAGTAGCAGGCTGTTTCGACGCTCCTGCGGTCGAGTGGTTCGCGGAACACGGGCATTTTCCTGTTCTTTGTCATCGTGTAACGCAAACCCA # Right flank : TCCTCGGGTGGCGCTAGTAAGGGGATCGACCACCGTCGCTCGTCAAGGAGGTGGCCGCAACCGGCTGACCGGTCGTCTTTTGTGTGGGGCGCGAATCGAAACCGGTTCGTCTGCTGAAAACCACACCAGGGTAGAGCAGTCAGCCAGTCGTCGCCGCACCACTGCCGATGAGGCAGAGCGCAACAAGGCGGTCATCGACGAAAACTGACCCGTAATAGGAGCAAGTAGCCAAGAGCCTGCCCGGCGCCATTGGTTTTGCTACCCCGTTGATATCGTCGACTGCTGCATCGCATCAAGCCGCTGCGAAACGGAGGTGCCCTGTTTTTACTGTCAACCGCAAGCAGTTCGTCGTGAATCTCGAGCGTCACATCGATCTAAGGAATATTGGGGGTACAATTAGGGGTGTCACTAAACTGTCTATAAAAATTACAAATAAATTTAATTGTTTAAGTGGTTCTGAATTGCTACCCAGATCCTGCCCCCGCAACCATCTCTCAACA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCTGCGCGGGGGCGTGGGTCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [35.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 55354-55020 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABGCC010000005.1 Novosphingobium sp. SG754 Ga0365359_05, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 55353 29 100.0 32 ............................. CTTCTTCATGTGCTCGATCTGCTCGACCGGCA 55292 29 100.0 32 ............................. AGCGCCGTGCAGGTCTTGCCGCCCCACTGCCC 55231 29 100.0 32 ............................. ACGGCCCCGACCTACACATTGCCCACGATTGC 55170 29 100.0 32 ............................. GTGCCGGTATAGGTGCCATCGGTGCCGCCGCT 55109 29 100.0 32 ............................. GTGAGCGCCTGATCCATGGCTGACCTTCAAAC 55048 29 96.6 0 ..........T.................. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 99.4 32 GTTTCCCCCGCACGCGCGGGGATAGTCCC # Left flank : AAAGTGTTCGCCACAGCCTCAGTCGCGCAGCATGGCAACCAACGGCGCCACTTCGGGCCTTTGCCGCAAGTCGGTGCGCAGCAAGGGCGCTGTTTCGCGGGTGTGCCCAACCAGGCGCGCGCCGGGAAACTGCCGCAACCAGAAACCCCGGTTGGCCTTGCCCAGATCGTGCAGATAGGCCAGCACGCACAGCCGCGCGACATCGTGCGCGCCCAGTTCCCGCTCCGCCGCGCGGTTCAGCAAGCGTTGCCAATGCCCTTGCGCCACCAGTTGGGCAAACACTGCCGCCACATCGCCGCCGTGATCCGTCAGCGGCAGGGCTGACCGATGCGCCAGCTCATCAGCCAACTTGGCCCAGGCGCGTGGAATGGGGCTAGACATGCCCCCCACTTTGCCGCGAAACAACGCTACCCGCCACCCGCTTTTGCACAAGGGTCGACGGCACCGCTTGCACAATGCGTCGGCTCTTTCCCTTTGTGAACAGAATGTTGTATAGCAGG # Right flank : AGCAATGGCGTTCCGTCGCCGACCAGATGCGTCCGAGGCTCCCAAGACTGGCGACTTTGATGGACGATGCCGAACCCGATGTCCTGGCATACATGACCACCCGTTTAGAGTTGGATATCCCTCTTACCGGCTGTCCAGCCGATCCAGCCAAGCTTGCGCCTGCTTGGGCTCGCCTACTGCATCCGACTTGACAGGCCCACGAGATGCGAGGAATTCCTGTTGAAGCGCGAAAGGCGGCATGCCGAGCTGCTCTCTCATTTGGTCGATCGCCTGACCGATTTCAGCCAAATTTTCGATGATCGGGGCTACAGCCTTGCGCGACCAGCGGTCTGCGTTGTGATCAAAAAGGCCCCATTTTCCTGCAGCCGTAACGCGCAAGGCATCAATCAGCGCTGCCATATATTCCGTTTCAAGTTCTGTACGACGAACGTCGAGGCGTTCCAACCTATCAGCCTTTGCCATCCTTTGATTGGTATATGGTCACGCCGCTGTCCGCAACG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCCCCGCACGCGCGGGGATAGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 2 64184-64577 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABGCC010000005.1 Novosphingobium sp. SG754 Ga0365359_05, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 64184 29 100.0 32 ............................. CGAAGAAGCGGAGGCCTGACCATGGAACATCA 64245 29 100.0 32 ............................. ATCATGCGGCCGATCACGCCGGCGCCGCCGGT 64306 29 96.6 32 ..........T.................. GCATCCAGCAGTCGAGCGAATTCCTCTCCTCG 64367 29 100.0 32 ............................. TCGTCCGATCGGTGCAGCGGCGTCATGAAGAA 64428 29 89.7 32 ..........T...T.........A.... GGGGAAAGTCCGGCCTCGGGCATGGCGCGCAT 64489 28 89.7 32 ....-.............A.....A.... GCCTCCCGATGCGCCCGATAGTGATCGGCCAA 64549 29 72.4 0 .............CA.......C.ACATT | ========== ====== ====== ====== ============================= ================================ ================== 7 29 92.6 32 GTCTCCCCCGCACACGCGGGGATAGTCCC # Left flank : CGTGGCCGAAGCGCGCGGGCAGCCGATCGAACGGGTGGTGCGCCAGCGCGCCGCGCGCCTGTTCCGCCAGCGCGGAATCATTCCCACGATGATCGACCAGATCAAGAGCCTGCTGGCCCAGGCGGACGAGGCCAGGCCCTGATGCCGCTGGTCGTGGTGATCACCCGCGACGTGGAAGACCGCTATCGCGGCTACCTCGGCTCGATGATGCTGGAACTGGCGCCAGGCGTCTATGCCCAGCCCCGCATGTCGGCCCGCGTGCGCCAGCGCCTGGCCGATGTGCTGGCAGACTGGCACGGCCGCCTGGGCCGGGGCAGCATCGTGATGTGCTGGGCCGAAACCGCAGCCAACGGTGGCCTTGGCCTGCGCACGTTCGGCACGCCGCCCAAGGACGTAGTGGCCCATGACGCGATGTTGCTGGTGCGCCGGCCATTACCGGAACAGCCCGAATCCCGGTGAATTTGCTCTTTCCTATTGTAAACAAGATGTTGTATAGTAGG # Right flank : TCGCGCGTCGCGCAGTATCCGCCATGCGGCGCCCCCTGCGTCTTGCCCAACTCCCCCTTGCCCGCTGCCACGCAGCGGTGGCATGAGACGGGCATGCCTGCAGATCTTTTCCGCGCTCGATTTCACGCCGTTGGCCAACGCGGTTACCGGCTTGCGCGAGGGGCTGGTGCGCTTTGCCACCGATGAAAGCGATACGCAGATCCGCGACGGGCTGATCCAGCGCTTTGAATTCACCTATGACCTTTCGCACAAGATGCTGCGCCGGGTGATCGAGGCGGGGGCCGCCAATCCCGAAGAGGTGGGCCGCATGACCTTTCCCACTCTGATCCGCACAGCGGCCGAACAGGGGCTGACCGGGGCGGACTAGACCGATTGGCGGACGTGGCGCGAGATGCGCAACATCGCCTCGCCCATTGCGGCGTCGCCACCTCAGACAGAGCACACCCCGTATCCGTTCGCCCGCGCTAACTGCCAGAGTAGCAATGAATCGGGATACACTT # Questionable array : NO Score: 2.74 # Score Detail : 1:0, 2:0, 3:0, 4:0.63, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCCCGCACACGCGGGGATAGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //