Array 1 12898-13584 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAIVBK010000056.1 Bacillus thuringiensis strain CH_72 contig00056, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	================================	===================================	==================
     12898	    32	 100.0	    34	................................	TATTGTTACACCTTTAGAGTATCCGAGTAAAAAA 	
     12964	    32	 100.0	    34	................................	TGGGTGGCAATGTTTGCGTTATTAGTTCCGAGTG 	
     13030	    32	 100.0	    35	................................	ACAATGGGAAAGTGTTAGGTTATGCACGTTTTAAA	
     13097	    32	  96.9	    32	.......................A........	GAAGATAGTAGAAGAAATCAAAAAAAGTGTAT   	
     13161	    32	  90.6	    33	.........T.........T...A........	TTTGTTGCTCCAGTCGTTATGATCGTCTTTGCA  	
     13226	    32	  93.8	    33	.......T.T......................	TAGGAGTTATTAATGGCTTTAGATGTTAGACCA  	
     13291	    32	  90.6	    34	.........T.........T.A..........	TACCTCGGGTTTATATTTATCTGGAATGCCCATA 	
     13357	    32	  93.8	    33	........CT......................	TTTGCAACTAGCTCAATTGTTTTTCCGTTTTCA  	
     13422	    32	  96.9	    34	....................A...........	TACCTCGGGTTTATATTTATCTGGAACGCTCATA 	
     13488	    32	  90.6	    33	.........T.A.......T............	ATAATATCACAATTTTGACAAAATTCAGTCATG  	
     13553	    32	  90.6	     0	A.T.................T...........	|                                  	
==========	======	======	======	================================	===================================	==================
        11	    32	  94.9	    34	GTCGCACCTCATATAGGTGCGTGGATTGAAAT	                                   	       

# Left flank :   ATTGAAAATGGAGAAACAGAGAATTTATATCCAGGGATTAATAAACAAGGAATAAGAACATTTTACACGAAACATTCTACAGATGTTGAGAATGAGGTTGCTACTGCGATTCATGTGTACGTTGATGTATTAAAACAAATGAAGCGTGAAGGTGCTGAATTAGCAAGGAAGAAGTAGAACGATGTGATTAGAAGATTTAATAAATAAAATTCTTCATCATATTATAAAACTATACATTCTTGTTTATTAGTTAGCTAATAGCTATGAAAATAAAATTAAATATATCGGTGTACAAGAATGAATTGATTTAGAAAGTCCTTTGATTTTTTAGGTGCGAATGTATAGCAAACATGAAATTCCTAGTACATTCGCACCTAGAATTCTCATAATGTATGATGGGGATTTATGATTTTTATACAAAATACTTTAATAAATAAAAATATTTTTATATTTTTGAATAGAATTAACGTATTTGTGATTGATTTTGAGCACAAATCGGT
# Right flank :  TAGTTTAGTAGATACTCAACTAGAAGTATCTATATCTGCAGTATCTAATACAAAAGTAAACAGTATAAAATGGAGGGAGATTGAATGACCTACATTGCTCATATACGCGAGAGTGACAGTCAAGTACAAACAGTCGAAGAGCATTTATTAAGAGTAAAAGAACTAGCTGAAACCTATGGAGAAAAAATTGGTATAAAACATTTAGCTGGTTTAGCCGGTATGCTCCATGATATGGGGAAATACACCAATGAGTTTAAAGAATATATATTGGAAGCAGTAAATAATCCTAATTCTCCACCTAAAAAGGGGAGTGTTGACCATTCAACTGCAGGGGGGAAATTGTTATATCAATTATTCCATACAGAAAATATGATTCCTTACAAAGGGATAATATCTGAGATAGTGGGAAATGCTATTATTTCTCACCACGGATACCTTCAAGATTTTTTAAATCCAGATTTAGAATCGCCCTATTTAAATAGAGTGCGAGATAAGCAATT

# Questionable array : NO	 Score: 8.46
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.45,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACCTCATATAGGTGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.12%AT]
# 	Reference repeat match prediction:         F [matched GTCGCACCTCATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-2.20,-2.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-12] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [76.7-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.41,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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