Array 1 72188-68838 **** Predicted by CRISPRDetect 2.4 *** >NZ_VOPZ01000010.1 Desulfovibrio sp. JC022 scaffold_9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 72187 32 100.0 35 ................................ TTTTTACCGAAAGGAATATCATCATCATTGCGGGA 72120 32 100.0 33 ................................ AGCAAGCATCTGAATTAGAACTAGAGCAACTTG 72055 32 100.0 34 ................................ TCATAGGGTTTAAAAGAAAGAATAAGGCTTGGAT 71989 32 100.0 34 ................................ TGGTGCTGGTTCCTCAACGATTCTTACACCTGTT 71923 32 100.0 34 ................................ GATAGCGGGTAAATCAAAACCTTCACCGAAAAGA 71857 32 100.0 35 ................................ ATAACCCTTGTGTATATACACCGAAACAAGTTAAA 71790 32 100.0 34 ................................ TTGATCTGCTCGTCATCGAATCCGGCGGCGCGGC 71724 32 100.0 35 ................................ TCAATATCAACCTTCATGGACTCCGCTATCTGCTC 71657 32 100.0 34 ................................ CCGTTGCTTCCGGGCTTACCGGGGCCATGATTTA 71591 32 100.0 34 ................................ TCAGCTATGAACGGATCACGGAAAACATCAAGTT 71525 32 100.0 34 ................................ CGTTTCGGCCTCAACGGGTGCACCATAATTATTA 71459 32 100.0 34 ................................ CTTTGTACCAACAAATTCCAACCCGTCCCCCTCA 71393 32 100.0 34 ................................ CGCTCCTTCGTCGCTATACGCTTGCAGCGGGCTT 71327 32 100.0 34 ................................ CACAAATCTGTACAGTCGTTCAGCGTTTGTGCAG 71261 32 100.0 35 ................................ AAATGGATGAATAAACTGGCCAGTCATGGCAACGG 71194 32 100.0 34 ................................ TGTATTACCATAGGTCGCGTGGTGACCGTTGATT 71128 32 100.0 35 ................................ CGGGTCCGGCGGCTCTGGTTGTCAGCCCTGTCCAC 71061 32 100.0 35 ................................ TGTTCAAATGGAAAGGATCAAGACCACGCAGGAAC 70994 32 100.0 35 ................................ CTCCTAATTACAGCTGTTCATTTCGCGCAAATATT 70927 32 100.0 35 ................................ CAAGCTGGCGCGGACTTTCCTGACCGGACTTGAGC 70860 32 100.0 33 ................................ AGCTTCAAAGGCGGTCATGGGGCGCAAGTTCTT 70795 32 100.0 34 ................................ CCGTCTATGCGGATATAGTAGGCCCCTGTATCGG 70729 32 100.0 36 ................................ TGCACCTCAAGTGCATGGAATCCGCAACCGCAGCAG 70661 32 100.0 34 ................................ ACCGTGTCTGATCCACTCATCATTCCCTGTAAAT 70595 32 100.0 35 ................................ TGGTTGTTAACGGCAAGCTCGTTTTTTTGGCTGGC 70528 32 100.0 34 ................................ TGTTCGGGTTTCTTCATCTGAAATCTTAACAGGC 70462 32 100.0 36 ................................ AGGTAGAACTAAAGAAGTTTGCATAAATTCACGCAA 70394 32 100.0 35 ................................ CGCTTCAAAGTACGGATCGAATGAACCTATAACGT 70327 32 100.0 34 ................................ TTGCTCAATGTAAGGAAGAGCTAAAATTCAGCGG 70261 32 100.0 33 ................................ TCGGTGCGGCGGCCTTTGATGGCATATCTGACG 70196 32 100.0 33 ................................ ACGGCCAATAACAAAGGTGTTCGGTCGAAAACC 70131 32 100.0 35 ................................ TACTCACCACGTTCTGGGCATTGCCGTTACCGATG 70064 32 100.0 35 ................................ ATTTCCGTCTGCGAATATGCGTTGCACATTCACAA 69997 32 100.0 35 ................................ TTTGATATTGAGTGCAATACTGAAATGGACGGACA 69930 32 100.0 34 ................................ GCTTTCGTCTGGTCTTTCTTCTTTGTCGCATTGA 69864 32 100.0 34 ................................ AACTTCGCAACAGCCCTATTAATCTTGTGCTCTT 69798 32 100.0 34 ................................ CAAGTCTCGCCGGGAACATTGGGGTACAGGTCTC 69732 32 100.0 35 ................................ CTGTTCAACCGGACCGATTGACATTTCAATAGCTT 69665 32 100.0 35 ................................ TCGATAAGTCTCAGCTGCTGGATATTTTCGGAGGT 69598 32 100.0 34 ................................ AGGGCGGATCTGACGCATCAACCTATACAACAGA 69532 32 100.0 35 ................................ TTTTTGCCCACTTTCCGGACATCGTCTGAACTCTG 69465 32 100.0 35 ................................ CTCTGCATCACCGACAAGAATCTCATCAAAAGCCG 69398 32 100.0 34 ................................ TAATAATTTTATGGGGGTGTAATGAGTGCATACC 69332 32 100.0 33 ................................ AGTCTAACTCAACCCAATCAGGTTTAATTAATG 69267 32 100.0 35 ................................ TCGTAACCGCTCAAGATAATATAACTGACAATATG 69200 32 100.0 34 ................................ CCTGTGGATACAGCGCAGTTATTTTATGTTCGTG 69134 32 100.0 34 ................................ GTTCGCAAATTTGGTGTCATAACGAAAAGTGTCT 69068 32 100.0 36 ................................ CCAATGCTCTTAAAACTGAAATCGTTGTGACAGCCA 69000 32 100.0 34 ................................ TATATCCATATTTTTGTTTTTTCGATTCAACAGG 68934 31 87.5 35 .....-...T.C.....G.............. GCAGACATGCCCAACGTCATCATCGAATACAGCCA 68868 31 81.2 0 .....C....GC.G...-......G....... | ========== ====== ====== ====== ================================ ==================================== ================== 51 32 99.4 34 GTCGCTCCCCATGCGGGAGCGTGGATTGAAAC # Left flank : ATCCGCCGTTTTTCTGGAAGTGATCCATGCTTGTACTTGTTAGTTATGATGTGAGTTTCGAGGACGAAGGGGGCAAAAGACGGTTGCGTCGAATTGCCAAGGTCTGTGAAAACTACGGACAACGGGTTCAGTATTCGGTTTTTGAGTGTGTTGTTGACCCCGGACAATGGGCAGATTTGCGCCAAAAGTTGCTGGACGAGTATGAAGAGGATAGCGACAGTTTGCGGTTTTATTTTTTAGGAAAAAACTGGCAGCGTAGGGTGGAACACCATGGAGTCGGGCAAGGATATGACCCTGAAAATGATGTGTTGATTTTATAGAATGCGAACCCTAAGCAGAACAGAAAATCACGGCATGTTCGCACTTATGAAAAAGATGTATTATTTAAGAGTGTTGCCGCTGATCGACTCTGCCTGATGAGTATAGAAAAAGTATTTCTTTAAAGGGTTCGCGAGATCTACTTCGTGAGCCCTTTAAAATAATGGCTTGAGAAAGCCACT # Right flank : AGCATCTGGTGTGCTGCACCGATGAGCATGGATAAGTAGTCCTCCGCGTGGGGACGTGGATTGAAATAAAGGTATACCGGTTTTTCGTTTTGAGGATACAGGTTGCTCCCTGCATGGGGAAGTGGCTTGAAAATCGTGAAGCTGTTTGCCACTCTATAAAGCAGGGTGTAGACTGAAACGAAGTGGCCTAACGTCGCCGTCGTATGTTTGCTAGTCGCCTTTTGTGGGGGCGTGGATTGAAACGACGTATTCGCAACCTTCGGGCTGTTGGACAACAGTCACCCTCTATGCGGGGGTGCGGGTTGAAACGGTCTGGTCGATGTGTTGCAGTGCGATCTTGCCGAGTCGTTCCCGTACGAGGGCGTGGGTTGAAACCACCCGATGGATACATTTCACGCTATGGATACATGTTGCCCCTCCCTGCACGAGGACGTGGATTGAAACAGGGCGTTGGACATGCCCGTGGCGGACTCGCTCGTCGCCTTCCGCTCGGGGGCACG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCATGCGGGAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.90,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //