Array 1 22349-26845 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAELTN010000058.1 Pedobacter sp. ASV28 NODE_58_length_32216_cov_12.934121, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================================================================================== ================== 22349 46 91.3 95 .CG.G.........................C............... CTTTGCTGCATGGAAAGCATTAATCATTGCGTTGTGATTTGCTTTATTCATTAGTTCTTATGTTTTTAATGGTATTCATGAGCTCTCCCGAAACA C,T,A,AAAC [22352,22354,22362,22364] 22497 44 87.0 95 T...G...CG.--................................. TCCATCATCCAATCATATTTCTTGGTTCTAGTTGTGATTTGCTTTATTCATTAGTTCTTATATTTTTAATGGTATTCATGAGCTCTCCCGAAACA C [22499] 22637 44 87.0 29 T...G...CG.--................................. GATCACTTTCTTCTTCCACGCCTATCTGT C [22639] 22711 46 100.0 95 .............................................. GATCGATCCTGGCGAACCGCTGGATCCTGAGTTGTGATTTGCTTTATTCATTAGTTCTTATATTTTTAATGGTATTCATGAGCTCTCCCGAAACA 22852 44 87.0 30 T...G...CG.--................................. CCTAATGAGTACTTTAATTGATACAACAAT C [22854] 22927 46 100.0 31 .............................................. ACACCATGATTGGTAATGGTCACAAAGCCAG 23004 46 100.0 30 .............................................. CTGATTGATTTGAATTGCATTTCTGAATAG 23080 46 100.0 30 .............................................. GCAGCTTTGTTGGGCTGTTTGTTTACGTCG 23156 46 100.0 30 .............................................. CTAAAATCAAAAGAATACAAAATAGCAGCG 23232 46 100.0 30 .............................................. TATAGGCGGTGATGTTACAGAAGTAGTTTG 23308 46 100.0 30 .............................................. CGAGAAGTGTTGCTTTGTCCTGGCTTGATC 23384 46 100.0 30 .............................................. CCTCGGGGGCATAATCGGCAATACCAGCTT 23460 46 100.0 30 .............................................. ACTCATTGTGCCTAACCCATTGTCTTTCCA 23536 46 100.0 30 .............................................. CTCTAACATTCTAACAATGTAAAAAACTCT 23612 46 100.0 30 .............................................. GGTCGTTATATTGGGCCTACTTGATTTAGT 23688 46 100.0 30 .............................................. AAATCATTATCGCTCATCATCTCATCTTCC 23764 46 100.0 30 .............................................. TACGCTCCAATTTCCTGCGGTCATAATGGT 23840 46 100.0 30 .............................................. GCGAAAGGATATTGGGGGGACTTCCCGACT 23916 46 100.0 30 .............................................. CCTCAGCGGGAGATATATAAGTCTCCGCAT 23992 46 100.0 30 .............................................. ATGATTTTGATTATTCACAATTGAATTGGA 24068 46 100.0 30 .............................................. GTCGGGATTGCAGATAGAGCTTGCGGCTAT 24144 46 100.0 30 .............................................. TTGCTCCTACAAAAACAGTTGGAAACTATA 24220 46 100.0 30 .............................................. AAATTTTTAGACCTAGGCATATCAAATACC 24296 46 100.0 30 .............................................. ATAGTAGTAATATTACTACCTTTATAAAGT 24372 46 100.0 30 .............................................. AATACGGCTAATGCTACCCAAAATCAATTA 24448 46 100.0 30 .............................................. TCGCCCCCGTTATTGATCTCGGCGACGACA 24524 46 100.0 30 .............................................. AGCCAGAGTGTATGAACCCGGATGTAAATT 24600 46 100.0 29 .............................................. ACTACAAGAGAAAACTATATAGCGATGAA 24675 46 100.0 29 .............................................. GAATGGAAAGTAAGATTATACGAAGAAAT 24750 46 100.0 29 .............................................. CAGAATTAGAAGCAAAAAACATGATACAA 24825 46 100.0 30 .............................................. ACAGAATTAGAAGCAAAAAACATGATACAA 24901 46 100.0 30 .............................................. TAAGAATAGGAGGCATAGGTGACTACACGG 24977 46 100.0 30 .............................................. TTTAGCATGGACAGCTTCTTGATATCTTCG 25053 46 100.0 30 .............................................. AAATGGAGAGAATTTTAAACAATGAAAATA 25129 46 100.0 30 .............................................. TACTACAAGAGAAAACTATACAGTGAGGAA 25205 46 100.0 30 .............................................. GTAAGCGGAGGACAAGCAGCAAATGCAGCA 25281 46 100.0 30 .............................................. GAATAGCAGATGCAACAGAATTAGAAGCAA 25357 46 100.0 30 .............................................. ATCGCAATTCATCAATTACCATAAGTACAA 25433 46 100.0 30 .............................................. TTCTTTTTGAATATGGCAAATTTGCTGAAA 25509 46 100.0 30 .............................................. GCTTAAATCGTTACGGGGATGATCTGCTAC 25585 46 100.0 30 .............................................. TCGCCTTTTTTTAAAGTAACATAATCGTTA 25661 46 100.0 30 .............................................. ATTAGCAGAAGAATGTTATTTTACTATGCT 25737 46 100.0 30 .............................................. ATTAGCAGAAGAATGTTATTTTACTATGCT 25813 46 100.0 30 .............................................. ATGCAGAATGATATTGCGCTCAATCCATAA 25889 46 100.0 30 .............................................. TGAAATTGGCCTGCAAACCCATATGAACCT 25965 46 100.0 30 .............................................. TATCTGCATGGAAGGTTAATAAGTTTGTTG 26041 46 100.0 30 .............................................. GATTGAAAGGAGTGTTCCGAGCGAAGAACG 26117 46 100.0 30 .............................................. AAATTTTTTAGGACTATTCATTTAAAAATA 26193 46 100.0 30 .............................................. GCTGTTCAATGCAAAATAAAGAATTTGTGG 26269 46 100.0 30 .............................................. ATTTGCAGACGATGCATACACCGGTTATTT 26345 46 100.0 30 .............................................. CCTTTATATGGATAGCCTAAAGCTTCAAAT 26421 46 100.0 29 .............................................. CTTGGCCGGTCAAAAGCAATTGCTTAAAA 26496 46 100.0 30 .............................................. ACATCTATTCAGTTAGGCCAGCGGGCACGT 26572 46 100.0 30 .............................................. CAAACTTCGTATTCTTTTACTAGATATTTC 26648 46 100.0 30 .............................................. ATGGCGGATTGATGGGAATGTTAAGCCCCA 26724 46 100.0 30 .............................................. TTTGGGCACATACAGAGCTTAAAGAGGATG 26800 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== =============================================================================================== ================== 57 46 99.2 33 GTTGTGATTTGCTTTCATTCTTTGAACTACTGATATTTACAACAAC # Left flank : AAACCAAATTAAAATGAGATAAAACACTATTGAAAATGGGATGAAATACACATTACATTTGAGTTTTATCTGTCTTTTATCCCTGTTTTATCCGAGTTTCATTTTTCTTTTATTAATTTATTTTTTACCAGGATGACCTGGATTTTTCTAATAAAATACTTTGGCTTTATAATAAGTTATGAGTATTTTCAATCAACTAAAAACTTAAATTATGAGAAGATTATTCCTATCCTTAGGTCTACTTGGTATTGCCCTCACCACCCTTTCTGCGGGAAGTAAAAAAACGGTTCAATCTGAGTGCCATGAGTACTTTCGCATCATTAATCGCTATGGATGCGGCGATGTTTTAGTAGACCAATTTTTAATTTGGTCGAATAATAATCCTACCAGTTGTTATGTCACAACTGACCAAATTACTGTAATTGGCGATCCAATACCCATTTGTTACCATCTACATCCTCCAGGTGGCCGATATTAATTTTTATTTGCCTCGCCTATCT # Right flank : CATACCTTAGTTCAATCAACTATGCCTCAGCAGGTTAGTTCAAAAATTAGAATTAAAAAAATCCTGATGTATTTGCGTCAGGATTTTCATTCTAGTTATTTATTCAATTGTAAGAAGAATAAATAACTAGAATAATTCCAGTTGTTGTGGTGTGTCAGGCAAGGCTTTTTCATCTTTGCCGTAAAAAAGTTCCATGGCACCAAATTGCTTATCGGTAACCGTCATGATGCCAATATGGCCCTTGGAAGGCAACAAGTTCTTTACCCTTCTGATGTGAACCTCTGCATTTTCTCTGCTGCTACAATGGCGTAGATAAATAGAAAACTGGAACATGCTAAAACCATCTCTCTGCAGTTCTTTCCGAAAACGAGCATATACCTGTCGCTCTTTTTTGGTTTCGGTGGGCAAGTCAAAAAACACTAATACCCACAAAACTCGATATTGGTTTAAACGCATATTTAAAAAGGCAAATGATCATCATCTACATTGTTATTATCATC # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTCTTTGAACTACTGATATTTACAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.57%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCATCCTTTGAACTACTGATATTTACAACAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.10,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //