Array 1 33140-32510 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWIH01000054.1 Campylobacter coli strain 20G12 FNW-20G-12_S10_L001_R1_001_trimmed_contig_54, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 33139 36 100.0 30 .................................... GCTACAAAGAGTAACCTCGCCCTATGAGAA 33073 36 100.0 30 .................................... TATTGTTGATAAAGTTGATTTACTCTTTTA 33007 36 100.0 30 .................................... CAGGTTATGGAAATGGATTTAGAAGATGCG 32941 36 100.0 30 .................................... ATATCTGTAAACCTTACCATAGCAGAAGAA 32875 36 100.0 30 .................................... TTGTAAATCATCATAAACATCATAGCACTG 32809 36 100.0 30 .................................... TCCTGTTCCATAGCTTGCACTACCACTAAA 32743 36 100.0 30 .................................... CTCATTAATACTATTAAATCCGCCATCATT 32677 36 100.0 30 .................................... TTATGATGGTAAATCAATACCGAAAATTCA 32611 36 100.0 30 .................................... TCTTTGTTCTAGTATATTAGAGCTGTTTTT 32545 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 10 36 100.0 30 GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT # Left flank : AAATGAT # Right flank : AGATATTTACCAGATAATGAAAATTTCGGGGTTTTTTCATGAAAAATAGCAAAAATTATGCTATAATCTCATAAGAAATTTAAAAAGGGACTAAAATAAAGAGTTTGCGGGACTCTGCGGGGTTACAATCCCCTAAAACCGCTTTTAAAATTCAAATAAATTTTGCTGATGATATTTTTCTTGTTTTTTGTTTATTTGAATTTCTTCATTATTTGAATTTTTATATTTAAATTCTCCATGACTATCTATATCAAAAAGCGTTAAATTGGTTTCGTTATTAACTTTTTCGTTAAAAACTATGCCACCAAGCAAAAGCTCCATTTTATCAAATTGCTTTTCAGTGATGATTAAAGCCCTTACATTTCCATAAGGTGGCAAAATCTTTTTTACATTTTCAATAGAACTTTTTGCAGAACTTAAACCCTTGCAAATACGCATATAAACACTAAATTGCAGCATAAAATAACCTAATTTTATAAGATTATTTCTAAATTTACTTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: R [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-11.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //