Array 1 20769-23118 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHHR01000031.1 Kytococcus schroeteri strain H01 31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 20769 28 100.0 33 ............................ CCGGCGCGAGTGGGCTGCCCGCCGCAGCCTGAC 20830 28 100.0 33 ............................ CTCCTCCTCCTGCTGGCTCCACTTGCCTTCCAC 20891 28 100.0 33 ............................ CAGTCGGGACGTGCGGCGGGCCGCCCAGGGGTA 20952 28 100.0 33 ............................ CTTCCGTGCGCGGTTCTGGCAGCCCGCCGTGGA 21013 28 100.0 33 ............................ CATGATGTCCACGCCTTCGACGGCGCGGCGCAG 21074 28 100.0 33 ............................ CAAGTGCCCGTACACGTCCGAAGTCGTCTTGAT 21135 28 100.0 33 ............................ CTCACCCAGCACAGAGCCGCTCAACACCACCCA 21196 28 100.0 33 ............................ CATCGCTGCGTCCTACAACGCCGGGCCGGGAGC 21257 28 100.0 33 ............................ GTTCTCCTGGATCCAGATCGCCACCTGGTGGGT 21318 28 100.0 33 ............................ CCGCAACCCCAGGACCGGGCAGCGCGTCAGCGC 21379 28 100.0 33 ............................ CTTCACCGTGGGGTACCAGTCCACCGCGGAGAA 21440 28 100.0 33 ............................ CCGTCGGCGCTGTGGGCGTGAGGCTCACCAGCG 21501 28 100.0 33 ............................ CGCGCCGACCTCGCGCCAGTACCAGTCCGGGGC 21562 28 100.0 34 ............................ GACCAACCCGCCCAAGGAGACCCCCGTGGCACAG 21624 28 100.0 33 ............................ GTGGCCGGTGACGCCCTCGAACGCCTCCCACTC 21685 28 100.0 34 ............................ GCCTGCACGCTTGCGGACCATGTCGAGCAGGCAG 21747 28 100.0 33 ............................ CACGCCGTCGGCCTTCACGCCGATGGCTCGCTG 21808 28 100.0 33 ............................ GTCGCCGCCCGCGCGTTCGAGCCCCGGCGCGAA 21869 28 100.0 33 ............................ GTTGGGTCCGGTGGCTGAGGCGTTCGGCGTGAA 21930 28 100.0 33 ............................ CTACCCGGAGAAGTTGCAGTGGGACGGCCAGTA 21991 28 100.0 34 ............................ CCGGGGAGGGCATTGGCGGCACCGGAGGCATCGA 22053 28 100.0 33 ............................ CTGAACGTCCTGCTCGAGAAGCAGCACGACATC 22114 28 100.0 33 ............................ CTCCTCCTCCTGCTGGCTCCACTTGCCTTCCAC 22175 28 100.0 33 ............................ TCAAGGCCGACAAGGTGGCATCACCACTCCAGC 22236 28 100.0 33 ............................ GAGCGCCCAGGCCATCTGGATAGATGCATGGGG 22297 28 100.0 33 ............................ CATGGACGCCCTGCAGCAGGTCAACGCCGAGAT 22358 28 100.0 33 ............................ CAGGGTCCTCGAGCCCGGGTGGCTGCCAGCGTC 22419 28 100.0 33 ............................ CCCGGCGGTGCCGTAAATGCGGCGCGAAAGTAA 22480 28 100.0 33 ............................ CTCGCCAGCCACCAGACCGTCGTAGAACTGGCC 22541 28 100.0 34 ............................ CAGGTCGGTCAGGTCGGACAGGCGCAGGAACGCG 22603 28 100.0 33 ............................ GTCGCCCGGGCCATCCGGTGGGCAGCCGGGTAC 22664 28 100.0 33 ............................ CTTGCGGGCTGACCTTGTTCCCGGAGTCATCCG 22725 28 100.0 33 ............................ CCCCACGAGGGTCACGCCCCCGGGGCGGATGCG 22786 28 100.0 33 ............................ CGGGGCGGGGAAGCGCCGATCCCAGATCCTCCA 22847 28 100.0 33 ............................ CGGGGCGCCGGGGGACTCCTGGATGCGGATGGC 22908 28 100.0 33 ............................ CAAGTGCCCGTACGTGTCCGATGTCGTCTTGAT 22969 28 100.0 33 ............................ GCCCGGCGCGGTGCGCCTCACCACGGGGCAGTC 23030 28 100.0 34 ............................ CACCGGCTGCAGCAGGACGTCCCCACCCGGAGTG 23092 27 96.4 0 ...........................- | ========== ====== ====== ====== ============================ ================================== ================== 39 28 99.9 33 GTGAGCCCCGCGCGAGCGGGGATGAGCC # Left flank : TGTGGTCCGGCCGTGGGCACACTACGGTGGCAGGGGGCATCAGTTACGGGGTGGACTGGTGATGGTCCTCGTCGTGACCGCGGCGCCGAGTGGTCTGCGTGGCGAGTTGACCCGATGGCTGATGGAGATCGACTCCGGGGTGTTCGTGGGCAACCCGAGCCAGAGGATCAGGGAGGAGCTGTGGCAGCGCGTTCAGGAGAACATCAAGGAAGGACGCGCGTTGATGGTGTACCGCTCACAAGGGGAGCAGCGTCTGACCGTCCTGACACACCGTCACCACTGGGAGCCCACGGACTTCGACGGACTCACCCTCATGAAGCGGCCGCTCCCGGACGACCGTCCCGGTAATCCGCCGTCGAGACGCACAGGCTGGAGTGCTGCGCGCGCTCGTCAGCGTGGGCTTCGGCCGGGATGGCGTCGCGGAGACCCTGAGCCGAGAAACTGAAGAAGAACGGCGCGCCCGCTGCCACGTATGCTGGCGGTTAGGCCGTTTTCTTAGG # Right flank : | # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAGCCCCGCGCGAGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTGCCCCGCGCGAGCGGGGATGAGCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 131-1684 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHHR01000140.1 Kytococcus schroeteri strain H01 140, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 131 28 100.0 33 ............................ GTCCACCCCGGTGGTCTCCCGGCGGGCGCCCCG 192 28 100.0 33 ............................ TCCGGCGAGGCGCCGGAACCAAGGACCTCATCA 253 28 100.0 33 ............................ CAGGCGGGCGAGCAGCGGGCCGAGGCGCGAGAA 314 28 100.0 33 ............................ CTATGGCTCCTGTGACCACGGGTTGTCAACCAC 375 28 100.0 33 ............................ CACCGACGCGCCACGCAGGCGCCGCTTGTCGGC 436 28 100.0 33 ............................ CACCCGCACCGCCGAGCAGACCATCGCGGCCGT 497 28 100.0 33 ............................ CAACGCCCTCATGGGCGAGCAGCCCGCCCAGCA 558 28 100.0 33 ............................ CACCCACGATCGCGGCCAGAGCCAGGGCAGCAG 619 28 100.0 33 ............................ CACGTACCACGTGCCGGAGCGACCAAGGCCGAG 680 28 100.0 33 ............................ GCGCACGCGCCACGTGGTGGTGCCGTCTGTGGC 741 28 100.0 33 ............................ CGACAGCAAGATGTATGAAAAGGCCCCCCTTTT 802 28 100.0 33 ............................ CGCGACCGGCGTGTCGATGGAAGACACGACCGC 863 28 100.0 33 ............................ CCACCGCACGACGGTGGGGGACGGTTCGGTGGC 924 28 100.0 33 ............................ CTCCGAAGAGGGCGTCTTCGAGAAGTTCGTGGA 985 28 100.0 33 ............................ CCACTGCGGCACGGCCCAGCGGACGGTGCGGCC 1046 28 100.0 33 ............................ CCTGGCCCCTGTCCATGTGGACCGGCTGGACGA 1107 28 100.0 34 ............................ CGCAGCCCTGGCGGAGGTGCAGCCGAACCGGGAG 1169 28 100.0 33 ............................ CTGACGCCAGGCACAGCACCGGGGTCAGGATCA 1230 28 100.0 33 ............................ CACCGAGCAAGCCACGGCCACTACGGCCTCGCG 1291 28 100.0 33 ............................ GTGGGGTCCGGCGACCGAGCACGCCGCGAAGTC 1352 28 100.0 33 ............................ AGTTCTTCCCCTCCGGTGACCCCATCATGGGCA 1413 28 100.0 33 ............................ CACGGGCACCATGCGAGCGCACATCGGGTCCGT 1474 28 100.0 33 ............................ CTCGCCACGATGCACGACCCCCGCCTCTTCCAG 1535 28 96.4 33 ......................C..... GCCAGGTTGTCGGCGCTCTTCGGCATCCTCGGC 1596 28 82.1 33 A.C.....T...G........T...... CATGTTGGGGTAGAAGGCCCGCGTGATCTCCAT 1657 28 96.4 0 .............C.............. | ========== ====== ====== ====== ============================ ================================== ================== 26 28 99.0 33 GTGAGCCCCGCGCGAGCGGGGATGAGCC # Left flank : TTTCCGCAACCTGACCCACTACGTCGCCCGATCCCTCCTCGAAGCCGGCGGCTTCAGACCACGACTACACCCTCAGATCGGATGAGCCGGATGAGCCCACTGTCGTCGGCACCGGGCTGCCGGGCATGTGG # Right flank : CAGCATCGGCGGCCTTGTGCGGCCCGTTGCCGTTCATGCGCACCGTGCGCCGCACCCTCATGGACAAGGGCGTGGACCCGCGCAACATCTCCTACGAGGTGTTCGGCCCGGACCTGTGGGCCCAGGACCCGGACAACGACGCCGCCGAGCAGAAGGTGCAGCTGAACGCCGCCATGGCCTGACACCACCGTGCTCCACCGGGGCCTCCTCCGCGCCGTCCGGGGGAGGCCCCAACGTTTGGTCAAGACCTCGGCAGGAGTCCGTCTGCGGCCTTGAGAGGGCCTGTGGCGCACCGCACGATGGCGGTGCCGGAGCAACCTCCAGTGCGCCGGCCCCGCCCGCCGGGCGGTCCCCCATCCAAGGAGAAAGACCATGCGTCGCACAACGCTGAGCGCCCTCATCGCCTCCCCGGTGGCCGCCGTCTCGCTGGCGGGCCTGGCCCTGTCGTCCACCGCCATGGCCGACAGCCCCGACCTCGGCCCCGAGTCGGCCGCCGTCGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAGCCCCGCGCGAGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTGCCCCGCGCGAGCGGGGATGAGCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //