Array 1 46126-43590 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHBAY010000025.1 Kineosporia sp. J2-2 25, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 46125 36 100.0 37 .................................... ATCGCCCGCCTCGCAGCAGACGGCCTATGGCTCCACG 46052 36 100.0 37 .................................... CATCGACGCAACTGCTGATGAATCCGCACGTAGGCGG 45979 36 100.0 35 .................................... GAGGGCGGCCAGCTCCCGGGCGCGCGCGACGTCGT 45908 36 100.0 37 .................................... GATGCGGATGAGCTCGACGGGGCGGTCTCGGCGGGGG 45835 36 100.0 37 .................................... AGGCGTCGGCACAGCTCCGGCTCGCGCAGCGACGTCC 45762 36 100.0 39 .................................... ATGGGTGCAGACACCGATGAACTCATCGCCCCGGTACAG 45687 36 100.0 36 .................................... CGCTCCAACGCGATCCGGACCGTCTCACGATCTACC 45615 36 100.0 37 .................................... CGCACCCGTCGGCCCAGGCCAGAGGCCCGTCCGGTGG 45542 36 100.0 39 .................................... TGCGGCAGTGCTCGACTGTACTCGGACCCCGGCGAAACA 45467 36 100.0 40 .................................... TCGCCGTCGCGGGTGCTGTTGTTGCGGACCACGACGGGCT 45391 36 100.0 38 .................................... ACCGGCCACACGTCCGTGATGAGGAGCGGCGACAGCTG 45317 36 100.0 38 .................................... AGGTTGAAGCTGACACCCTCAACCCTGTACGAGATGAC 45243 36 100.0 39 .................................... CGAGTCCACCGTGCTCGGACCCACCGACAGCGTCGCCAT 45168 36 100.0 35 .................................... TCCCTGACCAGCGACGGCGCCGACCCGCAGGTCGT 45097 36 100.0 37 .................................... AGGTTGAAGCTGGTCCACTGGGTGTCCGGGCTCCCGC 45024 36 100.0 37 .................................... AGGGCGTCGGCGACCCCGAGGGTGGCCAGGCTCAGGG 44951 36 100.0 37 .................................... TTGTCCGGGCCGATCTCCGCGGTCAGGCCGCGCACGT 44878 36 100.0 37 .................................... GACTAATCTGACCGGAAGCGAGAGCCCATCGGTGCGC 44805 36 100.0 39 .................................... TTGGGCGTTGAGCGCGAGCCGGTTCACCGCGTCGCGTAC 44730 36 100.0 39 .................................... ACCGGTATCGCCCACCGCAGCAGCAGCAACTTCTCCACT 44655 36 100.0 37 .................................... CCCGGCGAGGAGTCCACCGAGCCCGGCCGTGCGCCGA 44582 36 97.2 38 ..T................................. GACGCTACTCGTACCCGCTGATCGAAGTGTGCTGCCCC 44508 36 100.0 38 .................................... ACGATCGGTGGCGGCTCAACCCCAGACCCTGCGCCGGA 44434 36 100.0 37 .................................... CCATGCAGCGAGGTGGGTGCGGGAGCGGTCGACGGGC 44361 36 100.0 38 .................................... AACGACGTCCACTGGACGTCCGGTGTGCCGCCGGAGCC 44287 36 100.0 37 .................................... TGCTCCGCCTGCCCCGCCACGATGTCCAACACCGCAG 44214 36 100.0 36 .................................... CCACGCGGTCCAGGCCGGCCGCAGGTGCAGCGCCCA 44142 36 100.0 38 .................................... CGCTTCTCTGCCGGTTTCATGTCGGTGTGCCGCCACCG 44068 36 94.4 38 .................A..........A....... AGAGCAGACGCACGCGCGGCTGGTCACGATGTCGTGCG 43994 36 100.0 40 .................................... AGCCGGGCGCCGGCGGTGATCGCGGCCCCCCAGCGGTCGG 43918 36 97.2 39 .......G............................ TTGGCGTCCTGCTCGTCCTGGCGGCGACGGGCCTCAGCC 43843 36 97.2 40 .................A.................. GCGGGCTATCGCGTTGGCCGCACTCAGCTTGACCAGACGC 43767 35 88.9 36 ...............-.........C......G..A ACAAGGTCCTCCGTCAATTGGTGGGCACGGCTGCGT 43696 35 97.2 37 ...............-.................... GTGTCACAGTGCCTCGTCCGTCTCCTAAGTGGCGTTG 43624 35 75.0 0 .C..GT........T-...............AC.TT | ========== ====== ====== ====== ==================================== ======================================== ================== 35 36 98.5 38 CTGTTCCTGGCCTTCCGGGCCAGGCTCCGTTGAGGC # Left flank : CGACATCCACATCCTCGACAGACCACCCCGCACCAGCACTGGAGGCATCTTCGCGCGAGAACAATCCCCACCCCACCGCACCATCAGCACCGGAAACTTCTATGTGAGAATAAGATTCAAAAAGCATCACACGCCCCACCGAGGAGGACTCCTGACCGCAGGGCAGCTCAGCCACTACGGACTCGGACTCTTCCGCCCACTACCACCGCACGAGCTGAACCCCTGAGCCGACCCCACCACAGCCCGCGAACCACCCGATACTTGAAAACTCGATAACGTTGCGCCCCGAATCCCACGAGCCAGACAACCAGCGACGACGCAACACACACCGTCCGCGAGCGCTCAGGTGGCACACCCCTTACGCTGGAGCGCTCGCATGCAGGTCAGAGGGCAAATCCAGCCCTGCCGCTACTCCGGCAACACTGCATGAGGTGCGGGCTTTTGCAGCGCTCGCGATGATCTTCATTGCCGCAGGCCAGAGACCGGAAATTCGGCGAGCC # Right flank : GTCCAGCCGATCAGAGCGACGATTGCCCACACGACTTCGTGATCATGAATCTCCAAATGCATTGTTGTAAAGGAGGATCCATAGATCTCAATCTTGCCTTGTTTCGTATCAGCACCAAAGCGGACCCGGTAACAGCTCCTTCTTCGTCAATCCGACCACCGCACAGGTCAGTGAGACTACGGGCAAGGCCACGACGAGTCTCCAGTTCCCCTCGCATCCGTTCTGTTTCCGCGACATCACGACCCCGGTGAACATTTCGGCGTCCCGGTACCGGCGCACCAGGAGCACCGCCTCTGAGCACGAGGGTGTTCTTCCCCGGGTAGGACGGTCGCGTCCTGAGGTCGCTGGCGTGGTGCTTGGGTGCGTGACGTAAGTCGCTGGTGTCCCTGGAGTCCAAGCACAGTTCCGCCTGCGAGCGGCCGCCGTGCGCCGTGTGCCTCATGCGTTCCGGTAGAGATCATCCAGACCGATCAGGTGCACGTCGGCGCGCTCACCCGTGA # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCTGGCCTTCCGGGCCAGGCTCCGTTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-13.90,-14.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 46874-44353 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHBAY010000024.1 Kineosporia sp. J2-2 24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 46873 36 94.4 35 A....A.............................. GCAACGGCAGAGGGTGTTGCGGGCCGCCGGAGCAG 46802 36 94.4 37 .....A..A........................... CACGAGCGGGGTGAGGGGGAGTCCGGTGAGTGATCTC 46729 36 94.4 36 .....A..A........................... CACGGTGACCGAGCGAGACCCGTTCCCCGCTGTGCT 46657 36 94.4 37 .....A..A........................... GTGTCGGAGAAGCCCGGCCCGGACCACCCACCAACCG 46584 36 94.4 37 .....A..A........................... CGGTCAAGCCGACGCTCACCCAGCTCGAGGCGTTCGC 46511 36 94.4 38 .....A..A........................... ACGTCGTCGAGGGAACCACCCGCTGCACCGAGCACCAG 46437 36 94.4 37 .....A..A........................... ACAGCCGCCACGAGCACAAGCACCGGGAGCCAGGGAT 46364 36 91.7 37 .....A..A........T.................. AGATCGCCAACGAGAGGGGCAAGTTCGCCATCTACGA 46291 36 94.4 38 .....A..A........................... AGGACTGCACGGGTGGCAGGGGAAAAGGAATGGCTGCG 46217 36 94.4 39 .....A..A........................... GGGTGCTCCGACTGGCGCCCGCAGTCCTGCGGGCATGAC 46142 36 91.7 36 .....A..A.................T......... CAACGACCAGCTCTCGGACGCCACCGGCGACATTCA 46070 36 91.7 38 .....A..A.................T......... CTGGCCAGCCACAGCGTGGCTGGCGCGGGCCAGATGCT 45996 36 91.7 39 .....A..A.................T......... CAGGCCAGCACCACGCCGCCTGAGCCACCAGCCGCGACA 45921 35 86.1 38 .....A..A.....A...........T......-.. GCCCTTCACCTTCATTTCCAGGCCGATCGGGCCAGCGA 45848 36 91.7 31 .....A..A.................T......... GGTGCGGCGACCCGACCGGCACGGTGCAGGC 45781 36 91.7 37 .....A..A.................T......... ACGGGCCGCGACAGCCGCCTGACACCAGCAGGAAGGA 45708 36 100.0 39 .................................... GTCCGAGAGCCTCCTGCACCCGCAGGCCGGCCTGAGCCT 45633 36 100.0 35 .................................... AAGGGGGTTGCGGTCGCAAGGTTGACCGTCGGCGG 45562 36 100.0 36 .................................... TCCCGGCACGGTCGGCACCGCCACCGTCCGAGGCGT 45490 36 100.0 37 .................................... TCACGCCCGCCCGCGCGCTGATCGGCGACTCGGCGTC 45417 36 100.0 38 .................................... GCGTCCGTGATCCCACGATCGCGCTGGCGAGACCCGTC 45343 36 100.0 37 .................................... GCCGAACGGTATTTCGAGGCCCGTGGCGGTCAGTGGT 45270 36 100.0 36 .................................... CTGCGGATCTCACGATAGCCGCTGAGCATTCAGCGC 45198 36 100.0 37 .................................... CCGATGAGACGGCGAAAGGATTGACGCCCACCGTCTC 45125 36 100.0 38 .................................... GCCCCACGCCGACCGCCACCAAGCCACCCGGGAGAACT 45051 36 100.0 37 .................................... GTAGGCGCGGCCGTCACGGACCTCGTAGACGTCCTCG 44978 36 100.0 39 .................................... CTGCGGCGGTGCTGCATCCTTCAGCCAGGCGTCCACGTC 44903 36 100.0 38 .................................... CCGGCCGCAGGGGAGATTGGCCGGCAGTTCTCGACCTG 44829 36 100.0 38 .................................... GACGGCAAGGCCACGGCGGCGCTGCTCAAGAAACGCAT 44755 36 100.0 37 .................................... CTACATCGGTGTAGGCGCGGTACTGGACCTCGGTATT 44682 36 100.0 38 .................................... CGAGTCGGTCTCGCGCTTCATACGGCGCGGAATCTCCT 44608 36 100.0 37 .................................... CATTTCAGCCCCCGTGGTCGTCGTTTCCCGATGACCA 44535 36 100.0 38 .................................... CGCTTCGCACGCACGTGCGACCTGCATGGCGTCGACGT 44461 36 100.0 37 .................................... GCACGCCAGGACTGGATACGAGCAATGGGCTGGGGGT 44388 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 35 36 96.7 37 GCCGCGACGGAGCCCGGCCGGAACGGCCGGGAAGAC # Left flank : GGTGCAACTCTCGTTTCGGCGAATCGCTTTTGTGAAAACCGTTGAAGCCAGGAAAATTCTGCCTTTTCTGATGGCGCGGGCCGCACGAGAGGGCGGACCAAGCGGTCGTCGTGCGCGACGGTGAGAATGTCATGCTCCTGCGCTGCCCGTCATCCGGCTTGATGGGCGGCGCCATCTACGAACCGTCCTCTGGCAAGTTCGACGCCGGAGAGGGCCTTACAGAGCCCTGGCGCGTGAGGTCAAGGGGTATCTGTGACTCACCATGGCCGACGGCACCTTCTACCCACTGATGGCATTACGGCCCCCTACGTACCGGGGGTGGGCCCGGAGCCACACCCAACACGCACTGCGCCTCAACGGCGCAGGCATAGCTGCTGCCCGTAGGGTCAGTGCATGGTGCAGCTGAGCATGGTGCAGCTGATACCCGAGATGAGCGCGCCGCAACGGAGCCCGCCTGGGAAGACCCGCACCCGCAGTTACCTGCTCCTGACGGCACAGAT # Right flank : CGCTCGCTAAATTACCACCTCGTGACCAGGCACAATGAAGATCTTTGCGAGCGCTCCGCCGGAACGTGGTCACACGCCGGTTGGCGAGCGTTTCAAGGCACTGAGAAACGGCCTCTGACCAGCATGCGAGCGCTCGTGCGTGAGGGGGGCAGCACCGGAGGGCTCGCATCAGACGATCTGTGGTTTGTCGGAGGGCAGCGAGCGGCTTCGCCCGACGAAGGTGATGCTTGCGGTGTCGGGGTCTCCGAGGTCGATGATGACGACGGAGTCTTCTCGAAGGTTCATCGCGTCCTCGACGGCGGCTCGGGCGTGCACCAGTTCGGTGCGGCTCAGGTCGCTGATGAACACCGAGTACTGGATTCGCTGGCCGAATTCTTCCATGATTTTGCAGACTCGGCGCAGTCTGCGTGGGTCGGCGATGTCGTAGGCCAGCAGATGCCGGCGTCGTGGCATTGAAGGGCTCCTGCGAGGTGGTTATCGAGTGGTGAAGGGCGTGTACT # Questionable array : NO Score: 2.95 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGCGACGGAGCCCGGCCGGAACGGCCGGGAAGAC # Alternate repeat : GCCGCAACAGAGCCCGGCCGGAACGGCCGGGAAGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-16.50,-17.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,0.74 Confidence: LOW] # Array family : NA //