Array 1 12199-10824 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB291531.1 Capnocytophaga sp. oral taxon 324 str. F0483 Scfld829, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ===================================================================== ================== 12198 46 100.0 30 .............................................. CGTGTTTTCTACGCCCCTACGGCGTTCCTT 12122 46 100.0 67 .............................................. ATTTGTTTTATTATTATGGTACAAAGGTACGTTGTGAATTGCTTTCAAATTTTGTAGTTTTNNNNNN 12009 46 69.6 30 NNNNNNNNNNNNNN................................ AATGTTGTACTCATCTCCCTCTTTCATTTG 11933 46 100.0 31 .............................................. CCTCATTGAGTCCGGTACGTACCAAATCGAA 11856 46 100.0 68 .............................................. CGAGTAATCACTTTGCTTTCTTCTGAACAAGTTGTGAATTGCTTTCAAATTTTGTAGTTTTGNNNNNN 11742 46 69.6 30 NNNNNNNNNNNNNN................................ GGAGGTGTGCGGCGAACACGTGCGCGTGCC 11666 46 100.0 30 .............................................. ACACAATCATCTGTTCTGTTTATTCCATCA 11590 46 100.0 69 .............................................. AAAGTGTTTCGAGCGAGTTACTACCACTTTTGTTGTGAATTGCTTTCAAATTTTGTAGTTTTGNNNNNN 11475 46 69.6 30 NNNNNNNNNNNNNN................................ ACTAATGCGTTATTTAATCGATTAACACCG 11399 46 100.0 31 .............................................. CCTCATTGAGTCCGGTACGTACCAAATCGAA 11322 46 100.0 66 .............................................. TCCAATCGGAAGATACATCCACAGCGATACGTTGTGAATTGCTTTCAAATTTTGTAGTTTTNNNNN 11210 46 67.4 30 NNNNNNNNNNNNNNN............................... AAAAAATGTTTGGAGATACATTTACTATTC 11134 46 100.0 30 .............................................. GAATATCGCTACTCTCTTGGTTGTACCACC 11058 46 100.0 30 .............................................. ATGAAAACAATTGTTACTGATGTGGTTCGT 10982 46 69.6 67 ................................NNNNNNNNNNNNNN NNNNNNCAAATTTTGTAGTTTTGCGATTGATAACAACTTACAACGAAAACAAAAACAATAAGTTGAG 10869 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ===================================================================== ================== 16 46 90.4 43 GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAATTTTGTAGTTTTGCGATTGATAACAACCAAGTTACCATTTTAAGAAGGGAAATCAGA # Right flank : CTCAATCTTTTAAGAGTTTAAATATCAATCAGTTTTGCTTAAAAACAGTACTAAAAAACCTCCTCTTTTACCTTTGTTTATAAGGTTAAAGAGGAGGTTTTCACTTTCCTATTCTTCTTAAAAAAGCTCTAATTGCACATAGGTTTCGGGAGCTGCTGTTTCTCTCTGACAGTAAAAGAACTCCATATCGCCAAACTGCTTATCGGTTAGACACATAATAGCTATATTGCCATACTGAGGTAAGTTTTGTTTTACACGATTGATATGCACTTGGGCATTCTCTCTACTAGGGCAATGCCTTACGTACATCGAAAACTGAAAGAGCGTAAAACCGTCCTTTATGAGTTTATCACGAAAGTTCTGTGCTTCTTTACGCATCTTTTTCGTTTCTGTTGGCAAATCGTATAATACTAATACCCACATAATTCTATAAGCATTATATCGTTCGGCTATGATCATAATTCAGGATAAGCTATCAGTCGCTTTTCACCCGCATAGCA # Questionable array : NO Score: 5.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.52, 5:0, 6:0.25, 7:-0.69, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.57%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [30-28] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 13527-12988 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB291531.1 Capnocytophaga sp. oral taxon 324 str. F0483 Scfld829, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 13526 46 89.1 30 A....A....AA..C............................... TGAGTACCCCTAATATATAAGGGTCTATTG 13450 46 100.0 30 .............................................. TAATTGTAGAAATTCGTAAAGTGTCATCTT 13374 46 100.0 30 .............................................. GCAACATAATATTCAGCAATATCAAATTCG 13298 46 100.0 30 .............................................. TGTACAAGAGCACCTTGCAGGTGCTGTTGT 13217 46 69.6 5 ................................NNNNNNNNNNNNNN NNNNN Deletion [13167] 13176 37 67.4 30 ---------NNNNNN............................... TCCTAAAGGATTAGCCATTGCAGGGCTTGT 13109 46 100.0 30 .............................................. AAACTAATTTCTCGCATAACTTAAGTTTAT 13033 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 8 46 90.8 27 GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC # Left flank : ATAAAAGGGAGAGGATTCGCTCGCTTTACTTGGCGTTATTGTTCAGATTATTTACTTATACATTTTGTAAATTGCTTTCAAATTTCGTAGCTCTGTGATGTGCGAGCCACACGGACAGGAAAAACAGTGTGAGCCGCTTTCAAACTTTATAGCTATATGATTGATAACAACTTAGTTAATTTTCAAATTTGCTAATTCTCAAATTTGCCAATTTATAGTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCATCTGAAACTAACTATTAGTTAAATAATATCATTGCTAAACCCCAGAAAAAGGCAAGCAGTAGCAACCAAGGCAAGCAACCTGAAAACATACTCAGTATGACTTTTATAGCTTCTATTAAAAAATTATCTTTCATAGTGATACTATTTTAGAGTGCAAAGATAATAAAACATTAGCAATTTTAAACCTTTGTCGTCTTGTTAATTTGTCCCTATTTACATAATATGGTAAACAAAAAAAAGGAGTATATA # Right flank : ATTTTCACCAAGTTAAAAGTAGCAATTATGGTTGTGAATTGCTTTCAAATTTTGTAGTTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.42 # Score Detail : 1:0, 2:3, 3:0, 4:0.54, 5:0, 6:0.25, 7:-0.37, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.57%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAATTTTGTAGTTTTGCGATTGATAACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //