Array 1 245102-244232 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CCPI01000009.1 Pseudomonas aeruginosa strain Liverpool Epidemic Strain, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
    245101	    28	 100.0	    33	............................	TCGTTCACGCAAGAGGGCACGGACGGCCTCGAT	
    245040	    28	 100.0	    32	............................	TAACGTAACGTCTGCACATTATGCGAAGCCAG 	
    244980	    28	 100.0	    32	............................	AAAATCTGATGCCGACCATCGTGATTTCGAAC 	
    244920	    28	 100.0	    32	............................	GCCCGCTGGGGAAGCCGCAGTTATCCGGAGTA 	
    244860	    28	 100.0	    32	............................	ATGCTCATTTCGCCACCTCGATTCCGGCTTGT 	
    244800	    28	 100.0	    32	............................	AGGTTGACCAGCATGGCCGGCATCGACAGCGT 	
    244740	    28	 100.0	    33	............................	ATGCAGCCAGGGCTTACTCCGCTGCTGCTGGAC	
    244679	    28	 100.0	    32	............................	TTGAGCTTGTCGTTGTACTCGTCGAGGCTCAT 	
    244619	    28	  96.4	    32	.............T..............	ATACTGACTCAGCCAGGGAAAAGTCACTTGGA 	
    244559	    28	  96.4	    32	.............T..............	AGCGTGCCATGGCGGCGGTAAGTCAAACCGTT 	
    244499	    28	  96.4	    32	.............T..............	TGGTCGAACAGATGGCGGTCCTCGGCCAACTG 	
    244439	    28	  96.4	    32	.............T..............	ACGTCGGAACGCAACTACCTGACCGCGTTGGT 	
    244379	    28	  96.4	    32	.............T..............	ATCGACCACGACAGTGCTTCCCTGGTCTATTC 	
    244319	    28	  96.4	    32	.............T..............	ATTGGCCGTGCAAGGTCCACCAGTCGATGCTT 	
    244259	    28	  96.4	     0	.............T..............	|                                	
==========	======	======	======	============================	=================================	==================
        15	    28	  98.3	    32	GTTCACTGCCGTACAGGCAGCTAAGAAA	                                 	       

# Left flank :   ACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCT
# Right flank :  CTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAGGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAACAGCTTGAGCAGCAAACATGAAGCCCGCTCGAACGTCCCGTAGGGCGAATACCGCCACAGGCGGTATCCGCCGATGCCCTGGAGAGCCGGCGGATAACCGCAAGC

# Questionable array : NO	 Score: 6.09
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGTACAGGCAGCTAAGAAA
# Alternate repeat :   GTTCACTGCCGTATAGGCAGCTAAGAAA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,9] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGTACAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [0-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [38.3-58.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
//