Array 1 59908-60299 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAATOX010000003.1 Phaeobacter sp. HF9A NODE_2_length_87812_cov_3.991246, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 59908 37 100.0 34 ..................................... GCAGCCCAATGAGCTGCACTATTTTAGCGGCTAG 59979 37 100.0 37 ..................................... ATATCTCCTTATGTCTACCAAAAACCGAAAGCATGGA 60053 37 100.0 32 ..................................... GGCCAGCTCGCGTTGGATCTGTTCCTCCTCTG 60122 37 100.0 35 ..................................... CCCATGAGCCCGAAGGCCATGGCCATTGCCGCGAA 60194 37 100.0 32 ..................................... AACGTCACTTCAACCCCCTGATCCAAAATGTA 60263 37 83.8 0 .............................C..TCCGA | ========== ====== ====== ====== ===================================== ===================================== ================== 6 37 97.3 34 GGTGAGATCACCTGTCCGCACGAAGGCGGATTGAAAC # Left flank : GTAATTCAGAGGCAGAGGACTGGATCCAGCGAAAATCAAACGCGGGAAAGGCGGACGCCAGATGATCCTGCAATTTAGCGGGCGCCGCCAAAAGCGTCAGAGAGGCCCCGCGCGTGATTGACAAATCACCGGTGTCATACACAGTCTGGCCAAACGCATAAGGGGCACATTTGAAATAGGTGAGACCAAGTTTCTCCATAAAAATCTCCTCAATCAATGCATCCAGCATTGCCTAGCTCTTTCGTGTGAGCAAGAAATAATACTGAGGTGCCGAGATTTTACCGCCCGCTGAGAGAGGAAAGGGGCGCCAGATCTGCGAAGTAAGGCGCCGAACTTTTGAATTCACCTTCAGAAATGGCGTAGAGAATTGATAATAAATACAAATATAGCCTTTGATCACAATTTTTATCAAAAATTGGCGCAGGTTTCCTGTATTCGGGCTGCTTGCAATCGGAATGCGGGAAAATTTCATATTGATTTGAGTGCACTCCGGCGGGTAA # Right flank : ATGGGGTCTTTGGTCTTGCGTATCCCGCGCACCGGCAGGGCGGGTCAGAAAAGCCAGTAGCCCTCGTCGCTTTCAAACGGTGCGGCGTCGCCGAACACCCGGCTGCGCCGCTCCCCGTCATGGCCGATCACGTAAAGCCGCAGGCTGTCGCCCTCGCCAAGATGCGCCGCCAACTGCTGGCACAGCGCCTCCGCCGTCTGGCGACTCATCCGTGTTTCAAACACCGAGTACTGAACCCGCGTCGCCGCATCCTCCAACAGGCGGGCGATTTTGCGGCGCCGTTTGTTTGATGACACATCGTAGCTGAAGACGGTCAGCATCTCTCCGCGAGGCATGGTCAGGCCTCCATCAGGTAGGGGGCAAAACGGTTCGGCTCGCCGGCGCGCAGGGCCTTGGCGAAGTCCTGCGCCTGCCGCTTCATCATCGGGCGCCAGGCCAGTTTGATCTTGCGCCCCGGCGCAGTGACCTGACGGGCGACGGCGGCCTCATAGCCCGCGATC # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:0, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTGAGATCACCTGTCCGCACGAAGGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.90,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : NA // Array 2 62816-63123 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAATOX010000003.1 Phaeobacter sp. HF9A NODE_2_length_87812_cov_3.991246, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================ ================== 62816 37 100.0 30 ..................................... GTGGGCTTTTTGCCCAGCGGATTACCTGGT 62883 37 100.0 31 ..................................... TTCTTCCTTCTCAGATATTCACCTGAGAGAC 62951 37 100.0 32 ..................................... TACCGCCGGACGATACTTTCGCCCTGGACGGA 63020 37 100.0 29 ..................................... CCTTTGCTTGTTGGTAGGCGGTGAGGGCG 63086 37 81.1 0 .......................T...T...G.TGGA | A [63113] ========== ====== ====== ====== ===================================== ================================ ================== 5 37 96.2 31 GATTGGATCACCTGTCCGCATGAAGGCGGATTGAAAC # Left flank : CACCTGAGAGAGCGCCGTGTGGACCACCCGGTCGGACACGCTGGGAATGCGCAGGCGGCGATGGCCGCCCTTCGTCTTGGGGATGTCAACCGTGCGATAGGGCAGCGGACGCCAGCTGCCATCACCCAGGTCGGCGGACAATTGGGTCAGGCGACGACCTGCTCCAGACTGAAACTGCACCAGCGACATCCCATCGCCGCCCGCCGCGCCGCTGTTGCTGCGAACCTTCTCCCAGGCGCGATCAAGCTGCGGCAGCGACAGAAGTCTTTGCCAAAGGTCCGAAAGGCGCGCTACCGTCATAAGCGGCTCCAATCCTGGGTTTTGGGGCGTGGAAAAACTGAATTAGGTTCAGAAATATTACAACGTCATGATATCCATATCAAAAATAGAAATATCTTTCAATGAAGAGGTGCGAGTGTTGGCTTGTAGCACTGAAAAAGCACTTTGCTCCGGGAGAGGGAGGGATTTTTTTATTGATTTCCTGCTGATGCAACACCTAA # Right flank : ATTGGGCTGTTAGTGCGGGAGCGCGCCGGGCGAAAGCCGGATGCGGCCCAGCCCCTCTACCGCGTGGCGCCCGATGTGGCCGCGTTCCGCCAGCAACAGGAGCGGCCACAGCTCCGCGAGTTCTCCGCCAAACAGGATCTGTCCCTTGATGGTCTTATCTCTGCGCTGCTGTGCATGGCGGTTGGCGCTGCTGTATTGCCCGAGGCGAACATTTGTCATGTCAAAGCGCAGCGCGCGCGTTTGCTGCGCCAGGCGGGCGCCGACCTCTGGATCAAGCACAACACCGCACCACCGGCTCAGCCCATCCACCCGCCGCAGCGCTCGCGCCAATATGCTGTGGGGCTGTTCGATGACATTTGTCCCTGTCGCATCCATCGGCGATAAAAACTCCAGCCGGGCCAGCGTGACCGGATGATGGGTCACGGTAGAAAATCCAGACGCGGCACCGGAATATGTGGATATCTCTCGCTGGACAATTTGCGGCGGCCCTTCCAGGGCGC # Questionable array : NO Score: 5.87 # Score Detail : 1:0, 2:0, 3:3, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTGGATCACCTGTCCGCATGAAGGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.90,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : NA //