Array 1 232510-235661 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYDY01000004.1 Acinetobacter baumannii strain SGH0805 SGH0805.fasta_4_length_347566_cov_18.600695, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 232510 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 232570 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 232630 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 232690 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 232750 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 232810 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 232870 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 232930 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 232990 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 233050 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 233110 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 233170 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 233230 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 233290 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 233350 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 233410 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 233470 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 233530 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 233590 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 233650 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 233710 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 233770 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 233830 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 233890 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 233950 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 234010 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 234070 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 234130 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 234190 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 234250 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 234310 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 234370 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 234430 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 234490 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 234550 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 234610 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 234671 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 234731 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 234791 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 234851 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 234911 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 234971 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 235031 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 235091 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 235152 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 235212 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 235272 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 235332 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 235392 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 235452 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 235512 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 235572 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 235632 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //