Array 1 4664-5592 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKWV01000016.1 Acinetobacter ursingii strain TUM15519 sequence016, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 4664 28 100.0 32 ............................ CTTAAATATTTGATCTATTTAAATATTTTTGA 4724 28 100.0 32 ............................ CAACAGCAGCTGTCAACCTTGCTTGGGATCGT 4784 28 100.0 32 ............................ GTTCGTAAAAACAAACTGGTCAAGTACATTGA 4844 28 100.0 33 ............................ AGTGCAATTTACATTGGTGTTTTCAAATTTGGT 4905 28 96.4 32 ....T....................... ATGATAAGCAATCAAGTCACGATCATTGGGTT 4965 28 96.4 32 ....T....................... GATCAAACAGGGCATGAAACGTCCGGTCATGG 5025 28 100.0 32 ............................ GAAAGCTTGAGTGAATGCAAGAAGCGAAAGGT 5085 28 100.0 32 ............................ TAATAAACCATTTGAAAACAGTGATATACAAA 5145 28 96.4 32 .T.......................... TGGTGAAACCAACATGTTATTTTTTGATTTTT 5205 28 96.4 32 ..........A................. AGTCCATGACATCTCGGCTTTAATTTAAGCCA 5265 28 92.9 32 .........TA................. TGTTGATAAGCCTTAGCCTTCGCTTCTTGATA 5325 28 92.9 32 .T........A................. TTTACTCATACGAATACGTTGAAAAAGGCGGT 5385 28 96.4 32 ....................C....... AACATGCGGAAAGTTTAAACATCCGCCTCCAC 5445 28 96.4 32 ..........A................. AATCAACACAGATAATTTGCTTTTGCTCAACT 5505 28 96.4 32 ....T....................... ATGTAACACCATCAAAACTAGCAACAATACCC 5565 28 78.6 0 .T..............G..A....TTT. | ========== ====== ====== ====== ============================ ================================= ================== 16 28 96.2 32 GCTTCCTATCGCATAGATAGTTTAGAAA # Left flank : CTTAAAAATTCAGCTTTTTCACTGGGTAATAGTTTTGCATCCAAAATCTCTGCATCTGCCGCCCACTCTAACGAAAGTGTTTGTAACACCAGTGCTGAACTTTCTGCGAAATAGTCTTCGGTTCCCTGACCTAAATGAGCATCATATTGACGTAGTGCAGTCACACCGAAACGAATGAAATCACGAATCGTTGTTAGGTTTTCTGCTGCTTCCTGTAATTGTTCAGGGTGAATAGTCGGTTGCTCCACTCAGGGGTCTCCAAAAGATGATGATGCAAAACGGCTTATGATACCTTGTTTTGTCTTGCTTTTTAATGCCTAAAGCGAGTGGATTCAATTTTAAATCAAGTTGACTTATTGCTCTTTTTAAATCAATATTTTTCTTACCCTTTAATAATATAATAAAATCATAAGCTTATGATTTAACTTGTTTTTAAAGCATAATATTAAATTATTAAAATAACTTATTGTTATTAAATGATTTATTAATAAGAGTTTATA # Right flank : ATTTTCGAGACTCCAAACATTTTGTTTTTAATTGCTGCATCGCTAAAGGATCCATCGGTGCAGTCATCATGGCCCGATAAGCCAAACATTCCTGCGTTTCTTCTGTTGCTTGAGATTTGGCATTCAAGCTATGGCATCCCATCAGTCCCAAAGAGAAAATACATCCTAGAATAAATTTGATGAACATTGGATTTTCTATAATTTAATATTTGCTGATATCAACTCCAATTTTAAAACGCAAAACAGAAAATAGAAACCATTGAATAGACTTGTTTCATAAGTCCCTTTCATTTCTGCCTATGCGAGAGAAATAAAGAGGGTTTAAACAATGATGAAAGACGTCATAGTGTATAGATCTTTTAAAATTTGCTTATTTTCATAAAATCTTCTACCAATATATAAGCATTTTAAAAAGATGAGCTTAATAAAATGACAAATCCAGATATTCAAAGTGTAGAACTCACAAAAGCCTATCGTTTACTTAATCATGGCCCAACTGT # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.58, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCCTATCGCATAGATAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: F [matched GCTTCCTATCGCATAGATAGTTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.20,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [91.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 112072-94325 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKWV01000004.1 Acinetobacter ursingii strain TUM15519 sequence004, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 112071 28 100.0 32 ............................ TAAGCAAATCGAAAGGAGTTAAACCGCCTTCT 112011 28 100.0 32 ............................ TCTTCTGAAAGTGATAGACCTAAATCTTTGCC 111951 28 100.0 32 ............................ GCCGACACCTTTAGCTAGTGTTTTTGCAACAT 111891 28 100.0 32 ............................ GCCGACACCTTTAGCTAGTGTTTTTGCAACAT 111831 28 100.0 32 ............................ ACCAAGCGACCAACCGCCAAGACTGGCAGCAA 111771 28 100.0 32 ............................ ATATTTGACCCCTAGCACTAGCTAAGTAATAT 111711 28 100.0 32 ............................ CTGCTTATGATCCATCTTCGGAAAGTGATAGA 111651 28 100.0 33 ............................ TTGGGGCTTAAAAGTTCCTATTCTATTACTTGT 111590 28 100.0 32 ............................ ATGATGGAAGCTCCTAGTTTTTTTCAAAGATT 111530 28 100.0 32 ............................ TAAGAAGGCGCTTATTAGAATTTGATTGCCAG 111470 28 100.0 32 ............................ TTGTAAGCATTCGCCAGCTTTATGTCATAATT 111410 28 100.0 32 ............................ ATGCTTTACAAAGCTAAGATTGATCGTACAGC 111350 28 100.0 32 ............................ TTGTTAAAGCAATCGCCGCACATGGGTTGGGT 111290 28 100.0 33 ............................ TGATTGGCTTTAGATAATGCGATTAGCTTTTGC 111229 28 100.0 32 ............................ AATACCAGAAGATGGATTATCAATCCAACGAA 111169 28 100.0 32 ............................ TTTCAGCAGTTGTATCCTTTACTGCTTTATAA 111109 28 100.0 32 ............................ ATCCACAAATCACTAATACAAACATCACTAGA 111049 28 100.0 32 ............................ CTGCAAACGTCCAAGCATCTGATCTGAACGCT 110989 28 100.0 33 ............................ ACGTTCATAAAAGCGCATAAACTTGGAACTGGA 110928 28 100.0 32 ............................ TCAATTAGCTCCTAAGCTTGAACCTAAGTATT 110868 28 100.0 33 ............................ AATCATACCCATCCAGATTATTCTAATCCTCAA 110807 28 100.0 32 ............................ GGATAGCCATTTTTTACAATCGGCCTCAGATA 110747 28 100.0 32 ............................ TTAAAAGGTCAAACCATGCGCTTAACAGATGA 110687 28 100.0 32 ............................ TGCTACACAAAGCATCTGGCGAAATAAAAAAA 110627 28 100.0 32 ............................ TATCGACTGGAGCAACACAGTTGTTACAGTTT 110567 28 100.0 32 ............................ ATTACGTTCTAACCAACGCTTCTTCATGCGTG 110507 28 100.0 32 ............................ AGTAAGTCGTAGAGTCATAACGCTTGTTACTA 110447 28 100.0 32 ............................ TGCTGAAGCTCAATTACTGTTTCAACTTGATG 110387 28 100.0 32 ............................ TAAGACGACCGCAAATAAAGCAAAAGCAGGCT 110327 28 100.0 32 ............................ TGAGTGGTATGAGAAACCTCAGAGTAAGTTTA 110267 28 100.0 32 ............................ CTTAATCGATGCCAACCCATTGATAAAAAATC 110207 28 100.0 32 ............................ AGTTGCCGATGCTGCGCCATATTCACCAGTTG 110147 28 100.0 32 ............................ ACAGGTAGAGCGTATCCAGATGCCACAAGATC 110087 28 100.0 32 ............................ ATGTGGATGTTAAAGGCGGTTTGGTATTTAGC 110027 28 100.0 32 ............................ GCCATCTTGCATATGGCTTACTTTATCTGCTG 109967 28 100.0 32 ............................ GCAAACAATCATGCGAACGGCTGATGAAGTGC 109907 28 100.0 32 ............................ ATCAGAACGTGTTGAACCGATAAAACAGTTGC 109847 28 100.0 32 ............................ TCGATTTTGGAACTTTGGCGCATACCTTATTT 109787 28 100.0 32 ............................ TTGCCGAGTCGGTAATGAGATTTTATTCATTC 109727 28 100.0 32 ............................ AATGTACGGACGTTTGCAGTCTGAGTACCTGA 109667 28 100.0 33 ............................ AGTTGCCGATGCTGCGCCACGGTTTCCAGTTGC 109606 28 100.0 32 ............................ TTTACACCGTTTACTCGGCTAAAACGCCATGC 109546 28 100.0 32 ............................ AGTTGCCGATGCTGCGCCATATTCACCAGTTG 109486 28 100.0 32 ............................ ATAAAAGTTAAAGCGGGTAAAGATAATTTTGG 109426 28 100.0 32 ............................ TTTTAAGGAAATTACAAAGCCGGCAGCACCCC 109366 28 100.0 32 ............................ ACACTGGGGTAAATCAACATCGGCATGGTTTG 109306 28 100.0 32 ............................ AGACACAACTTAGCCAAAAGCAAATGGATAAT 109246 28 100.0 32 ............................ AATCGATCATTCGAGCTAATGTCGGATACGCT 109186 28 100.0 32 ............................ GTAAAGCAGCGGGTGACTTTGAAGATCAAAAG 109126 28 100.0 32 ............................ GATCGCGCCTTGCTCTTTCTCACGATCGGAAT 109066 28 100.0 32 ............................ CAATCAAAAATCATCTTTGCATCTGCGGGTAA 109006 28 100.0 32 ............................ CGCTGCTTTACGGATGCCTGTTACTGTCATAA 108946 28 100.0 32 ............................ TTAATCTTGTAATCAGTAGACTTTTTACCGAT 108886 28 100.0 32 ............................ TGTTACTGTCATAATTGGTTGTTGTGATGTGT 108826 28 100.0 32 ............................ TGTTTGTTCTACACGCCAGATCAACTGCTTAA 108766 28 100.0 32 ............................ ACGACCATTAATCATGATCAAGATTGTATTTC 108706 28 100.0 32 ............................ AAATAATGAAACTCCGAATGTTCAGAGCAATT 108646 28 100.0 32 ............................ AGAACGCAAAACGGCTCAATCATTTGTCCAAA 108586 28 100.0 32 ............................ ATAATGTTGCTTTACGCGAGCAGCGTTTTCTT 108526 28 100.0 32 ............................ TAGAAATTTAGAAGCAGAGCCATAATGTTGCT 108466 28 100.0 33 ............................ TGTTTCTAACTGTACACCACTTGTTGAAGGTCA 108405 28 100.0 32 ............................ TAAACCATATTTTTTAACTGCACCTAGAAATT 108345 28 100.0 32 ............................ CAACCAAGCTTTTTAAATCCGCTGCAATATTA 108285 28 100.0 32 ............................ ATTGAACATGCACAAAAAACCTTAGCTGATGG 108225 28 100.0 32 ............................ ATCAGTAGTGTCACCAGCCACGGCAACTCGAA 108165 28 100.0 32 ............................ AGTGCAATGAGCGCAACAGATACAGCTGATGT 108105 28 100.0 32 ............................ CTTTGAAAACTACACCCGTACGGCACAAATTC 108045 28 100.0 32 ............................ ATGCGCAAGCCCATCGATGAGTCAAAAAGTGT 107985 28 100.0 32 ............................ GCAAACCAAACGTACAAGCTTTACAAGGGGTA 107925 28 100.0 32 ............................ ACCGTAAGGTGTTTTGATTTTTGCAACTGATC 107865 28 100.0 32 ............................ ACGAAGCTTTTGTGCCAGTGCAATGAGCGCAA 107805 28 100.0 32 ............................ TTGTGTTCTTGCTGAGAGCCAAGCCACAAGGC 107745 28 100.0 32 ............................ GCTTCTAGTGTAAGCGTCAATCCTCAGTCTTA 107685 28 100.0 32 ............................ TTATCAGGATTACGGCCTTGTATTTTAAACAT 107625 28 100.0 32 ............................ TTATGCAAGATAGAGATTTACCTTTTCAGGAA 107565 28 100.0 32 ............................ ACAAGGCGACAGTCTGAAGAAAGTTTAATAAT 107505 28 100.0 32 ............................ ATAGAGCACATAGCTCGCTTATTCACCACCAG 107445 28 100.0 32 ............................ AAACATACTGCCAACGAGAAGGGCGCTGTTCT 107385 28 100.0 32 ............................ GTGCATCAAAAGTTGGTGAAAACGGTATTAAG 107325 28 100.0 32 ............................ AAAGTTCTACGTCTAAAATTAAATTTTCCACA 107265 28 100.0 32 ............................ TCTTAGATTTTTCATACGCTGTGCGTGTTCTG 107205 28 100.0 32 ............................ GTGATCGTAAAACGGGCGTGATCCTGTCGCCC 107145 28 100.0 32 ............................ AGATACAGGTAATGTGATTTCACAGGGCTTTG 107085 28 100.0 32 ............................ AAACCAAGCTGTTTCATCGCAAACTGACTGAA 107025 28 100.0 32 ............................ AGCCTCTTTGATTAATTCGTCTCGTTCTTGGT 106965 28 100.0 32 ............................ TACTATCGGCACTCCACATATTTTGTTAAAAG 106905 28 100.0 32 ............................ AACACCCCATTGCGTTCCGCATACCCCTTCCA 106845 28 100.0 32 ............................ TTTTTGCAATGCGCGAAGGTCCCCTAAGCAAT 106785 28 100.0 32 ............................ AATTACGTCAACAACGTGCGCAACAGCAACAA 106725 28 100.0 32 ............................ TCAGAGGTATTGGTTCCTGAAAAAGACTTTAA 106665 28 100.0 32 ............................ TCGTACTGGGTATCCTTTCTCTTCAAGCACCT 106605 28 100.0 32 ............................ TTCTTAGGAGATAAGTTTAAGTTCCGCATAAA 106545 28 100.0 32 ............................ ATTTCGAAGTTGCCCTTGTGCAATAAGCGCAT 106485 28 100.0 33 ............................ CAATGGTGGAAGCATTAATGAAGCTTGCAATAA 106424 28 100.0 32 ............................ ATCGACTTGCTTTCCAGTAAAGCCCACCGCTT 106364 28 100.0 32 ............................ ACTCTTGTGTATAGAACATTTTATCCTTGTGT 106304 28 100.0 32 ............................ TTCAAATGTATTAGATAAAATTGATGGTGGCG 106244 28 100.0 32 ............................ CGTCTTAAAAAGCAACCCGAATTACATCAAAA 106184 28 100.0 32 ............................ CTCAGAATCGGTATAGAGCGTATTCGCAATAC 106124 28 100.0 32 ............................ TGATAAGGACATAACAGGTCTTAAGCAGTTGA 106064 28 100.0 33 ............................ TAGAGTCATAACGCTTGTTACTAACTCGTGTCT 106003 28 100.0 32 ............................ GAGCGTGTTTAAATCTGAGATCCAAACCAAAA 105943 28 100.0 32 ............................ GTAGGGTGTTGATATAAAATTGGAGTAGTTTG 105883 28 100.0 32 ............................ CCCCGAAGAAATCGACCCACTCGTAGGGTTTT 105823 28 100.0 32 ............................ AAAGGCTTCGGTTCTAAAAACATGCCTTTTGC 105763 28 100.0 32 ............................ ACCAGAGCCATCACTAAAAATAGTGAAAACTC 105703 28 100.0 32 ............................ TGCAAGAAGGTGCTTTCGGTACTTGCGCTGCG 105643 28 100.0 32 ............................ TTAGGCTTCCTGTGTGTGCCAACACATTTGAG 105583 28 100.0 32 ............................ GTGAAGCATCTGCATGATGTGACGTTTCGGTG 105523 28 100.0 32 ............................ AACTTTTCAAAGACTGTATACAATGCCGCCTG 105463 28 100.0 32 ............................ ATGGTGCAAAGTAGTCTAATACCCATCTACCT 105403 28 100.0 32 ............................ TTTGTGCAACAAGCGCATCTCCTCAAGTGGTT 105343 28 100.0 32 ............................ CGTCGTCAATCTTTTTCGCTTCATCACCCATG 105283 28 100.0 32 ............................ ACCTGCACAACCTACACGTCAGGAAAGTAAAT 105223 28 100.0 32 ............................ TGAAAAAGTCCGCACAACTGATTATATCGACT 105163 28 100.0 32 ............................ GGTCAGATCCGCTAAAAGCTCAGGTTCAGGCG 105103 28 100.0 32 ............................ AATGTGCGTGACAAAGCGCCGATTCACATCGA 105043 28 100.0 32 ............................ AATTTCGATGAGCTCGAATATAAATGGAATAC 104983 28 100.0 32 ............................ GTGAAAGTTTAGATCCCGCATACGGCAGTGTG 104923 28 100.0 32 ............................ TCATAGACACGTGGCATAGATTTGTCTAAACC 104863 28 100.0 32 ............................ TGAACTACGCGAGCTGTACTGGTCCGCACTAG 104803 28 100.0 32 ............................ CTTGCAATAATTTCGCAGGACTTGCCTTTATC 104743 28 100.0 32 ............................ ACTACCTGAAGGTTTTATCTGGTTGTTCCAAA 104683 28 100.0 32 ............................ TCTCAGGGATTCAAAAATGCTACTTGTGGCTT 104623 28 100.0 32 ............................ AATTGTCGCCGATGCTAAATCAATAGCGTTAA 104563 28 100.0 32 ............................ GCTTGCCTGCTGCAACCGCGACAGGTGTAACT 104503 28 100.0 32 ............................ TGTTGGTTCTGTTAAAGATGGTGCAGGAAATA 104443 28 100.0 32 ............................ TTATCAAAACTTCAGTTGCAGCAACGATTGGC 104383 28 100.0 32 ............................ AGCGTGGAATTGGTGGGGTTAAATTGGCGTTA 104323 28 100.0 32 ............................ AAACGAAAGATTTAATAAAAATAGCGCTTATT 104263 28 100.0 32 ............................ GTCCGAGTGACGAATCATTTTGTGCAGCGCAT 104203 28 100.0 32 ............................ AGTGGGTCATTAATTGTCCGTACTGGAGAACT 104143 28 100.0 33 ............................ TGTTGTAAGATATATAGCCATTTTAATTAACCT 104082 28 100.0 32 ............................ TTGTTGAAGATGGTGATAGACCATTTAACTAC 104022 28 100.0 32 ............................ GTAGGGACGCCATTTTCTCCAAAGCTCTGCGT 103962 28 100.0 32 ............................ ATGAAGTTTGATTCATAAGCTTGTCTAAAACC 103902 28 100.0 32 ............................ GAACATTTACATGATGTCCTAAAAAGACTCCC 103842 28 100.0 32 ............................ AGTGGGTCATTAATTGTCCGTACTGGAGAACT 103782 28 100.0 32 ............................ AGAAAATTTAGGCAATAAAAAACCCCGAACAA 103722 28 100.0 32 ............................ GCAAGCGATTACGCAGAGCAATATTATTCTCT 103662 28 100.0 32 ............................ ATAACCAGCCATCGTCTGTTCAATATCATCGA 103602 28 100.0 32 ............................ AGTACACTATTTGGCAAAGCTGCTGCCGAAGA 103542 28 100.0 32 ............................ TCCAACACTGCATCAGTATGTGCATCAGCAAC 103482 28 100.0 32 ............................ TAAATATGATGAAGATGCCAATACTTTGACTT 103422 28 100.0 32 ............................ AAAATCGCTTTGGACAAACTAATTATTATCAA 103362 28 100.0 32 ............................ GCAACTGGATATTTGTACGCGCGTTTCAACAT 103302 28 100.0 32 ............................ GACTTGCAGCATCGGGTCGCTATAGCCAACTT 103242 28 100.0 32 ............................ CCGTGCTTTAGGTAGACGCCTAGCAAGTCGCT 103182 28 100.0 32 ............................ TGTATATTCCGCAATTGCGTTGATCGTGTCAT 103122 28 100.0 32 ............................ TTGGCAAAAGACATACAGCTACACGTGACACT 103062 28 100.0 32 ............................ TCGTTGAGCGGAATTAATTCAAAATATTCTTT 103002 28 100.0 32 ............................ TTTCAGCCGTAGGTGCGGCGACAGTTCCTGCA 102942 28 100.0 32 ............................ GTTAATTAATAAGGCGATAGCGTTATGACTGA 102882 28 100.0 33 ............................ GTTAACTCTTTCTTAACGTTAAATACTGCTGCT 102821 28 100.0 32 ............................ ACCAGAAATGGAAGCTACGAATAAAAGTGCTG 102761 28 100.0 32 ............................ GTTTGATTGGCGAGATCTGCCGAATGGTTCTG 102701 28 100.0 33 ............................ GTTTAACGGTGCATTGCAATATATTTTATTAAT 102640 28 100.0 32 ............................ ATTTGTTGATTTAACTGCTGAACCATACTCAA 102580 28 100.0 32 ............................ TTATGGTTGGCAGCAAAAGAAATCAAACAGGC 102520 28 100.0 32 ............................ CTTGCAAGAATAGTCAAATATAAGCTGCCCCA 102460 28 100.0 32 ............................ TGTTCGATCAGCTTCTTTTTCCAGTGCTTCAA 102400 28 100.0 32 ............................ AATTAAAGGCGGGATTCGATGTTGGTATGTGG 102340 28 100.0 32 ............................ AGACTGGAGGCGTCACGGTCATTCTAATTTCT 102280 28 100.0 32 ............................ TGCTGCGGTGGTTCGATTCTTTTTCCCATCTG 102220 28 100.0 32 ............................ TTTAAAACCTAGCAGCTAACAATTAGTAACCC 102160 28 100.0 32 ............................ TCTTTCTCTGCTAAAAAAATAAGAGCTAGTTC 102100 28 100.0 32 ............................ CGCCTCGCTAGCTGCTGCGCCCGATGAAAACT 102040 28 100.0 32 ............................ TGACGACCAGCCTGTCATTTCAGCCATGATCA 101980 28 100.0 32 ............................ AAGCATTGAAATTAACAGCGGAACAATCACGC 101920 28 100.0 32 ............................ TGAACCGGTCAAGCTCAGTGAAAAAGAGGTGT 101860 28 100.0 32 ............................ TAATGCATCGCGCAACACACTTAACTGCGCTG 101800 28 100.0 32 ............................ ATATTGAGGATTGATTCATGAATGCAATTATT 101740 28 100.0 33 ............................ AAAGATTATTAATAAAGTCTATCTGGTGTTCGT 101679 28 100.0 32 ............................ CAACATCGTGTTTTAAATCATGGATATGAACG 101619 28 100.0 32 ............................ ATATGCATAAATGCATGCATGTTGATAATGGA 101559 28 100.0 32 ............................ TAATAGATCAAGACTATTATCGACTGGACAAT 101499 28 100.0 32 ............................ AGTAATTAACGCTGGGCTAGATAATGTTTCAC 101439 28 100.0 32 ............................ TAATAGATCAAGACTATTATCGACTGGACAAT 101379 28 100.0 32 ............................ TAATTATGCGATAACCAATATAAATAGAAATA 101319 28 100.0 32 ............................ TGTGGCTGAACGTGCAACACAAGCAGTTCAGC 101259 28 100.0 32 ............................ TGATCAAACTCTTGACCAGCCTCATGATTCTC 101199 28 100.0 32 ............................ TACAAAAATGACCAAACCATCCGCTTGCCTGC 101139 28 100.0 32 ............................ TTGCATTGCGGCAGTCATAAACAATGAATAGT 101079 28 100.0 32 ............................ AATCAAATTCCGAGTTAGTGATTGACTTATCC 101019 28 100.0 33 ............................ TACAAAAATGACCAAACCATCCGCTTGCCTGCT 100958 28 100.0 32 ............................ GCTTAGGGAAAGCTAATGGATCAGAACAAGTG 100898 28 100.0 32 ............................ AGTTTGTCATGCTGATCTTTCAACACGTAATT 100838 28 100.0 32 ............................ TACAACACCCGATACATCTACCGCAGCATTTG 100778 28 100.0 32 ............................ ATAAGGATCTTTATTATTGCATTGACCCTCTT 100718 28 100.0 32 ............................ ACAAATCAATACATTTATTCTTATGTTTCAGC 100658 28 100.0 32 ............................ GCTCGAAGCTGAAATTGAATTTGAGATGGTTA 100598 28 100.0 32 ............................ TTTTGAGCCAAATTTTAAGATCATGATGTACT 100538 28 100.0 32 ............................ ACATGGACTAAGAACAATGCACTCTTCATTAA 100478 28 100.0 32 ............................ ATTACTTAGACTCCTCAGCTTGGTTTTGCTTA 100418 28 100.0 32 ............................ AGACAAAAGCCATTGTTTAAGCAGTAGTCCGT 100358 28 100.0 32 ............................ TGTTAAAAACGGTGAGGATTCAATGTCTGTTT 100298 28 100.0 32 ............................ TTGCATTGCGGCAGTCATAAACAATGAATAGT 100238 28 100.0 32 ............................ ACGAACACAGGCAGGACAAGACTACATTCAAA 100178 28 100.0 32 ............................ ACTAAAAATAAGGTGCGCGTTGCTTATACTAA 100118 28 100.0 32 ............................ ATCAACCCAAACAACATCTTTTACTACACCTA 100058 28 100.0 32 ............................ TTATGCGCCAGAACTGACACAAGGGCAATTAA 99998 28 100.0 32 ............................ AGTTGGACCAGCAATAGCTAGACGCAACTTAG 99938 28 100.0 32 ............................ TCATTCCCAATAAATCAGGAAAATAAAATGAC 99878 28 100.0 32 ............................ AAAGAACCTCAAAGCATGATCCTGTTTTAGTG 99818 28 100.0 32 ............................ TCACATTTAGAAATATGAAACGGCAAATATTG 99758 28 100.0 33 ............................ ACCAAAACGAGTGCATGGAATTTCAAAATTAAT 99697 28 100.0 32 ............................ TTCACTTTGGACGGCGTAGGGGCTTCATATAA 99637 28 100.0 32 ............................ CGACCCATCCAAAGCCGAACAAACAGTGGGGC 99577 28 100.0 32 ............................ AGGATTATTTAGTACGAGCGCAAAAGAAAGGC 99517 28 100.0 32 ............................ TCGCAGTTCTGAGTGATGCACTGTGCTTCTCT 99457 28 100.0 32 ............................ TATGCGTCGGTCAAGTCTGAAATCGCAGGAAT 99397 28 100.0 32 ............................ ATTGTGAATATTGAGATGAAGTAGAGACTCAA 99337 28 100.0 32 ............................ TACTTTGTACGTTACACCATCCACATCAAGCT 99277 28 100.0 32 ............................ TCAATCTGAGGGCCTGCCCTTTAATTATCTTT 99217 28 100.0 32 ............................ ATAAGCATGTTCATGACATTTTGGAAGATGGG 99157 28 100.0 32 ............................ ATACTTCGACCATCACCACAAATAATGCCTGT 99097 28 100.0 32 ............................ AAGACGATTGGCATCCAAGAAACCAAGCTGAT 99037 28 100.0 32 ............................ CAATTCGTCTGGTGTAACAACCCCATCTTCCA 98977 28 100.0 32 ............................ ATTTGTCGAATGATGAGCTTACACAGCTTGCA 98917 28 100.0 32 ............................ CTAAAATGATGTATGCAGCAGCGAAATAAGCA 98857 28 100.0 32 ............................ GTCACGATCACCGCTTGAATAATTCAGGTTTA 98797 28 100.0 33 ............................ ACACCGCCATTTGATAAGCCCCTTGATTCTTAT 98736 28 100.0 32 ............................ TGATAATTTTATCAGGTTTTTTTATTATAAAA 98676 28 100.0 32 ............................ TCAGTAAAAGTTGATGCTGCGGTTGGTAATTT 98616 28 100.0 32 ............................ ATAAAGGAAATCAAATGAACATGTTGGCTAAA 98556 28 100.0 32 ............................ AATGGTATGAATTGATCCAATATCTGCTAAAT 98496 28 100.0 32 ............................ TTTTTCAACGTCATATACAAGTGGCGAAAAAG 98436 28 100.0 32 ............................ ATAGGAAAATGAATAAGATTTACCTAATAGAT 98376 28 100.0 32 ............................ TGAACCGCTACCAGAGCCGTCACCATCACCAT 98316 28 100.0 32 ............................ GCATTTAACATCAATCTGCATTATACGAACTC 98256 28 100.0 32 ............................ AACGCTTGACCCAACTGATCAAAGGCGAATTT 98196 28 100.0 32 ............................ TTACTGGAGAAACTTTCACACATTCAATGAAA 98136 28 100.0 32 ............................ GCTTAAATTGCTCCAAGGTCATAATGTTTATG 98076 28 100.0 32 ............................ AAGAACGTATCCAAAAAATATTTGAACAGAAT 98016 28 100.0 32 ............................ ATGCCCCAGTTGAAAGTTGCTTTAGCTTCCAA 97956 28 100.0 32 ............................ TGAATGTCCCGAGGTTGGTTATCCAATTAATG 97896 28 100.0 32 ............................ ATAAGAAGCAATAAGTTCCATTGCTTCGATAG 97836 28 100.0 32 ............................ CTAAAGGAATGCGATGATTGTCCACCTCCGTT 97776 28 100.0 32 ............................ AAGTTTCCGAAATCATGAAAAAAGGCGGTGTT 97716 28 100.0 32 ............................ TCTATTGAGTTCCTCAAATATTTTCTCTATTG 97656 28 100.0 32 ............................ ACTCAAGGAAGGTCAATGTAACAATAAAGACC 97596 28 100.0 33 ............................ GATTTTTCGGAATAAATTCCGATTATCAGGAAT 97535 28 100.0 32 ............................ ATAAGGATCCTTGTTATTACATTGCCCCTCAA 97475 28 100.0 32 ............................ AAACAGCGAAGCCTATTAATCCAAAGAGAATA 97415 28 100.0 32 ............................ TTTCGCAATCAAACGTGCATGGGGTCAAGTCT 97355 28 100.0 32 ............................ ACCCACAGTTGATAATTCAGCAACTTTATTAA 97295 28 100.0 32 ............................ GTTGCAAATGCATATGTTTTTCGACTAGACGC 97235 28 100.0 32 ............................ TGAGAGACATACGGCAAAATAGTACCCTGTTG 97175 28 100.0 32 ............................ TGCGTAGGAACATACGTTCCTGTACTCGGTAA 97115 28 100.0 33 ............................ ATGCAAATTTAACTTAGAGTTTGAGTTTGACTT 97054 28 100.0 32 ............................ GAAAATATGTTCTACCGTAGATTCGACCAAAA 96994 28 100.0 32 ............................ ATGTCATCATACTGCCGAAACTGCTGATGATA 96934 28 100.0 32 ............................ TAAAGCATCAGAGATTTGTTGCTTGAATCCAG 96874 28 100.0 32 ............................ TGTCGCTCCATCAGTATAAAGTAGCGCATTGA 96814 28 100.0 33 ............................ ATGACTTCATGGAAAGTTGCTGTTGTAACTTTT 96753 28 100.0 32 ............................ GCAGCCATTAATCCAGATATTCAAACTGTTGA 96693 28 100.0 32 ............................ TAACAAATTGAATCCTGACGTTTTGGCATCGG 96633 28 100.0 32 ............................ GCTACCTGAACCATTTCCGCTACCAGAACCGT 96573 28 100.0 32 ............................ GTTGCAAATGCTAAAAGTGTTGCACGGGCAGA 96513 28 100.0 32 ............................ ACTTGCTGGTGGAGCGCTCACGGGACTATTGA 96453 28 100.0 32 ............................ TTTAGCTAAACGGACTTCTGGATTGTTGGATT 96393 28 100.0 32 ............................ GGATGTAAAAAATAATTGCACTGGAACATATT 96333 28 100.0 32 ............................ TGCGCAAATCATGAAACGTAAATTCGATACCT 96273 28 100.0 32 ............................ GATCTGTGCTTTGACTTAAATCAAGATTACCC 96213 28 100.0 33 ............................ ACCAAGTTTATTGACCAACTCAAGCGAATTTAT 96152 28 100.0 32 ............................ GCAATAGGAATACCTTTGGAACGTGCATCGTG 96092 28 100.0 32 ............................ TGATGCCACAGCGAAAATACACACATTTGAAT 96032 28 100.0 32 ............................ TACCACAAATCTTCACTACATAGACCCATACG 95972 28 100.0 32 ............................ TAATTTATCACCCTTGCTCAAGACTGATTATG 95912 28 100.0 32 ............................ TTGTCCCTTTTTCTGAAAATCTAGATACTAGA 95852 28 100.0 32 ............................ GATGTTTATACATACACATATTCGGCGTTTAG 95792 28 100.0 32 ............................ TGAACACATGCTGTATTAGAGAAAGTCAGTTT 95732 28 100.0 32 ............................ TGAAAAACGTAATGCAGAACTCGCCCAGACAA 95672 28 100.0 32 ............................ ATGTATTGAATAACCTCAGCAGCAGTACCGCC 95612 28 100.0 32 ............................ AATCCCTTCAATGACTTTTGAGACAGGAAACC 95552 28 100.0 32 ............................ ACCAGTACCAGATGTACCTCCATTCGAACCTG 95492 28 100.0 32 ............................ TGTTCCAGTACCAGTTCCTGAACCATCGCCAC 95432 28 100.0 32 ............................ ACGACAATGCATTTTTCATTGTCGATCTGCCA 95372 28 96.4 32 ....................T....... GTGCGCTAACAAGTGTACAGATTTTAAAGATG 95312 28 100.0 32 ............................ ACATGCGAGCAAATCATCTCTACGCTTATAAA 95252 28 100.0 32 ............................ TGAGAAGATCAAACCAAAAATGATACCAACCC 95192 28 100.0 32 ............................ TATTTAGGTGCTGCATTCATCATTGCAGGTGT 95132 28 100.0 32 ............................ CATATTCGGCGTTTAGTCGAAAAACACATGCA 95072 28 100.0 32 ............................ ATTGCATTGAAAACATATTTTGTTGTCTTTTT 95012 28 100.0 32 ............................ AGTTCCAGAATTACTATTTCCGTTTTTAGCAA 94952 28 100.0 32 ............................ TTTGGCAATGTTAATAAAAGTATTTCATTTCA 94892 28 100.0 32 ............................ ATACAACAGTCCTAATCAACCCCAATATACGG 94832 28 100.0 32 ............................ TGAAGATAATGAAATTGACTGTAGTGATCTAA 94772 28 100.0 32 ............................ ATCCAAAGAAAAAGCGCCTGAGCCTGAAAAAG 94712 28 100.0 32 ............................ TGTCGGGGGACGTTCGCAATAAGTACCTGTAC 94652 28 100.0 32 ............................ ATATTGGTCAACTTTATAAGCTTTAACTTCGA 94592 28 100.0 32 ............................ TAAATTTGAATTCGAATTTATAAGATGGAGTT 94532 28 100.0 32 ............................ GCTAGCCGCATTGACACCAGCAACTGCTGAAA 94472 28 100.0 32 ............................ AGCAAGACCAAACACGCCGCCACGAATTAAAT 94412 28 100.0 32 ............................ TTTAACATAAACAGTTCGACCATCCCATTTCA 94352 28 96.4 0 ....................T....... | ========== ====== ====== ====== ============================ ================================= ================== 296 28 100.0 32 GTTCATGGCGACATACGCCACTTAGAAA # Left flank : TGGAGCAACTGAATCTAACTCATTGGTTAGCAAGGCTGCAAGATTATGTACATGTCTTATCTGCTCGTAAAGTTCCTGAGGATAAGATCAACGGCTATGCTACTTATTTTAAAGTTAATCCAAAATTGACGGTTGAGCAGCGTGTTGTTCATCAGGCAAAACGTCGTGGAATCTCAATTGAAGAAGCACAGGAACACTTTAAAGCATTGGATCTGACAGAGACTTTTGAACCTTATATTAATATGAAAAGTCAAACTAATGATATGAACTTCCGTTTGATTATTGGAAAAAGACGTGTTGATGAAGCAAATATTGGAAAATTTGGAAGCTATGGATTAAGTCGTACATCTACAGTACCCGAGTTTTAACCCAATATTTTTTAGACTCTTTAACAGCTTAATAAAATCAATAAGTTATAACTTTGCTTTAAAACTTTGGGTATTACATACTTTTTAGGGTTAAAGCACTGTTATAACTTTATTTTTTGCTTTATTCTTATT # Right flank : TGCAAACGATGTGTAAGAGCTTAAGCTGATTGATTCACGAGAGTAGAATATGGAATCTAATCGCCCGTAAAAATGAGTTAAAAAGAAATAATATAAACAAAAACGAACTGCTTCTGGCGAAACAGTGCGTTAGGTTAATAAGATTATGCTGGTAAATCGAACCAGATCATTTCACTATCTTCAAGTGCATGAATCGTAGTTTTCTCATCAAACAATAAAGCATCACCTGCTTTAACAATTTGATTCTCAATCATAATTTGACCTTTAATCACATGCACATAATTGTGTTTTTGAGTTGCAGCAATCTCAAGTGTTTTACCAGATTCTAACACAGCCGCTTTCACTTCTGCATTTTGGCGAATATGCATAGCAGCATTATCATTTGGTCCTGCAATCAAGTGCCATTGATTTGGCTGTTCACTCGGATCAAGTTTGATTTGTTGATACGTTGGTTCAGCATCGCGTACATTTGGATGAATCCAGATTTGAAACAGATGCAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGACATACGCCACTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.20,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //