Array 1 720579-718223 **** Predicted by CRISPRDetect 2.4 *** >NZ_MAYH01000001.1 Chryseobacterium artocarpi strain UTM-3 scaffold_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 720578 47 78.7 30 ...C.A..CC.....T....T..........A...G.....T...A. AGTCTCTGGTTATTATTCTCAAATGGATAT A [720574] 720500 47 100.0 30 ............................................... TAGCCCCCGATAATTCAACACGGGAACCAT 720423 47 100.0 30 ............................................... AGGAATTTACCACGAAGCCAATAACAGATT 720346 47 100.0 30 ............................................... AGCCAATGGCAATACCATATTCATAGTTGT 720269 47 100.0 30 ............................................... TAGTGATGATGATTACGCAAAGGTTTGGAA 720192 47 100.0 30 ............................................... CACCAACGCCACCGGAAGTAGTTGCGTTGG 720115 47 100.0 29 ............................................... TAAACAGGAAATGTTTAAATTCAAATGTG 720039 47 100.0 30 ............................................... AGTATGGCAAAGTTAGCCGGGGAACTGAAA 719962 47 100.0 30 ............................................... CTCCCACACTGGTTTCTACTTCTTCAACAC 719885 47 100.0 30 ............................................... TTTGAAGAAGAAAAAAGAAGACAAGAACAG 719808 47 100.0 30 ............................................... GAGCCGTTTGTCTTCATACATTAATCAGTT 719731 47 100.0 30 ............................................... ATTAGATAGTCATGGTGATATGCATATTGC 719654 47 100.0 30 ............................................... ATTTCTGCTATTGCAATAAATGAAATAGTA 719577 47 100.0 30 ............................................... AAGGCTTAATTTTGCACCTACATTAATTTT 719500 47 100.0 30 ............................................... TTAAGAGCGGTGTTATTAATTCAGGGGTAG 719423 47 100.0 30 ............................................... TTTTCCCCTTTCTTGGTTGGTATTGACGTC 719346 47 100.0 30 ............................................... CTTGGCGCATACATCGACGCCGACGAAACA 719269 47 100.0 30 ............................................... CAATCCGGGCAAAAGAAGATAAAGAAGCCG 719192 47 100.0 29 ............................................... TACTAGATCAAATGGTGAGTCTTGGCTAT 719116 47 100.0 30 ............................................... GAACCATCCTTACAATGAAATTCACTTGTA 719039 47 100.0 30 ............................................... ACTTTAAGACATCGTTAGATAGATTCAGTG 718962 47 100.0 30 ............................................... TGTAAAATGAACAATTGCCATTGGTTCAAC 718885 47 100.0 30 ............................................... TGATTGTCTATAAATGTTTCAGTAGCTACA 718808 47 100.0 30 ............................................... CCCGAAAGGGGGTATTTTTAAAGCAATGTT 718731 47 100.0 30 ............................................... TTCGTTGATTAAGCCATTCTTTAAAGTAGC 718654 47 100.0 30 ............................................... GTAATTCAGGGAAATGATGCGCCTAGAGGT 718577 47 100.0 30 ............................................... AATTTTCAAATAAAACAATTGATGAGGTTG 718500 47 100.0 30 ............................................... ATCTAAGAATATTTTTTGATAAGCTAAGTG 718423 47 100.0 30 ............................................... AGCCGTTCAAATATCAGGATAGATACGTTA 718346 47 100.0 30 ............................................... ACCTTTATCAAGAGGGGATGTGCCCATTTT 718269 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 31 47 99.3 30 GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Left flank : TTACTGTGTGCTCCTGCCTCAATAATCACTGTAGGTAAAGATTTCTTATCTCCTTCTGCTCTTACATGGATGTTGGTTCCGTTAACGTTAACGAGTTTACCGGGCGGAACAGGTTTTGGGCTAAATAATCGATAACAAAGCCCTAAGAACAATAATACGATGAGAATTCCCAGGATAAGCTTTCCTAAAAACTTAAATACTTTTAAAATTGATTTCATGGTTATTTTTAAATTTCAAATTGACAGGGGGAAGAATTGTCGAAACAGAATATTCACGAAAACCTAAATGGGATTTGAATAAATATAGTAATTGAATCTTTGAAGCAGACATGATTAGAAGTTTCGGGCAAATATAACAAAAAGCCCTATGAACAGAAACCTATATAATATCATGTGTGTGATAGTTAGATCTTTAAAATTGGAAAATAAGTTAAGGAATCCTTGGAATGAATTTGGATATATTTTTTGACTTGTATTATTTGATTTTTCTATTTTGTAAAT # Right flank : CTCAAAAAACAATCTACTGATAATCAGTAGATTGTTTTTGTTTTTAGGATTCAAAATTTAAAATAATTCAAGCTGCTGGAAGGCTGGAGGTGGTTCTTCTTTATTTCTGGCAAAAAATATTTCAATATCTCCAAACTGTTTATCAGTAATGCACATAATTGCCACTTTTCCTGCTTTTGGGAGCATAAATTTTACTCTTTTAATATGAACCTCAGCATTTTCACGACTTGGACAATGCCTTACGTACATTGAAAACTGAAATAGTGTAAAACCATCATCAAGCAAAGATTTACGAAAGCGATTCGCATCTTTCATATTGGCTTTAGTCTCTGTTGGTAAATCATATAATACTAAAACCCACATAATTCGGTAAGCATTAAACCTTTCGGCATTCATATCAATTCAGGATAAGAGATCGTTCGTTTTTCTCCCGTATAACATTTATACAGTGACGTGGCGGTTGTTTTTACTGCAACCAATAAAGGTCTTGTTTTATCCCC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.60,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //