Array 1 156-481 **** Predicted by CRISPRDetect 2.4 *** >NZ_SWMA01000084.1 Ornithinicoccus soli strain XNB-1 WT-5_scaffold84, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 156 36 100.0 35 .................................... CTGCAGGCGATCACGCTTGCGACCGCCGCCGACCA 227 36 100.0 38 .................................... GCCGACCGGACCCGCGTCGAACACACCACGGTGCAACT 301 36 100.0 37 .................................... CTCCGGGGTGTTTGCCAGCGCAGTCTTCGCCGCACCA 374 36 100.0 36 .................................... GTCAACGAAGCCACCAACGCGCTGCGACGCGCGGCT 446 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 5 36 100.0 37 GCCGCAATGGAGCCCGGTCAGGAAGACCGGGAAGAC # Left flank : TGGTGCGGCTACCGTTCACCGATTGACTACGAGGCAGCACACGCCGCTACACTTCCGGCGGCAGCGTAATCCACCCCCGTGTCTACAAATTGGGGGCAAGGCCCGGAAGACCGGGAAGACTACGAGCACAGCTTCGTGCCGGTGGGCGCGAACCAG # Right flank : CCGCTCGCCAATTTATCAGGTGCTGACCTGCGGCGTTCCAGCGTGTCGCGAGCACTGCCCCGGCCGGCACCGATCCTTGCAGGATAAGCGGTATGAAACGGGCGAGACCGGCCTCTGACCTGCGGACGAGCGCTGCAGCGCGAGCGGGTCGTCGTCGGAGGGCTCGCGTCACGGCTCAGATGACTCGTGGCCCTGAGGCCGGAAGCCGCCGGTGTCGACCGAGGAAGATGAAGCGCGCGTCTGCGACCTCGCCCAGGTCCACGATCACGACCGAGTCTTCAGTCATGAGCATCTCCTCTTCGACTTCCGCTCGCGCATGGATGAGTTCGGACGGGCTGACATCGGAGATGAAGACCGAGTACTGCAGTCGGTCGCCGTACGCCTCCATGACCTTGCAAACTCGGCGAAGCCGCTTCGGGTTGGCTATGTCGTAGGCGATCAGGTATCGGCGACGGGCCATGACGTCACCGTGTCACGAACGGCGTGTAGTGGTCGACTTC # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGCAATGGAGCCCGGTCAGGAAGACCGGGAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-13.80,-13.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [33.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 89994-87488 **** Predicted by CRISPRDetect 2.4 *** >NZ_SWMA01000015.1 Ornithinicoccus soli strain XNB-1 WT-5_scaffold15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 89993 36 75.0 37 AGGG..AG.CC.C....................... ACCAGGCGGACGTGCGTCACCGACTCGGCATCGGCGT 89920 36 100.0 37 .................................... GATCAGGTCGCGGCAGACCGCGCATGTGACGCAGCGG 89847 36 100.0 37 .................................... CTGTATGACGACGGGACGGTGGAGCGTCTCGGTAAGG 89774 36 100.0 38 .................................... CATCAGGGCGGCGATCGAACCGGTGTCCAGTTCTTGGG 89700 36 100.0 37 .................................... AAGACGATCGCCTCATCGCCCTTGCCCTGCGGCGTCT 89627 36 100.0 36 .................................... CGCTACGAGGTGGCCGGCGGCAACACCGCCGCCCGC 89555 36 100.0 38 .................................... CACAACACCCTGACGCGAGCCTTGCCCCAGACCTGGGC 89481 36 100.0 36 .................................... GCGTCGATCGTCAGGACCGCCAGCAGCAGCGACGTC 89409 36 100.0 36 .................................... GAGTGCGTCGACGGCGTCATAGACGGCGCGGGAGTT 89337 36 100.0 36 .................................... CCGCCCAGGAACCGGCGGTAGGCGCCCGACTTGAAG 89265 36 100.0 38 .................................... TCCTACTGCCCGAGGAAAGGCCGGCCCCGATGCAACCG 89191 36 100.0 35 .................................... ACCTCCACCACTGCATGATGTGACCGAGGAGCCAC 89120 36 100.0 37 .................................... CTACCAGCACTGCCCGCGCCAGTACGTCCTCGAACGA 89047 36 100.0 36 .................................... CGCATCTGCGAGAGGACCGCGGACTGGGTCCGCTTG 88975 36 100.0 38 .................................... TGGATGGTGGCGACGATCCGCACCCGCCCGTTGACGGG 88901 36 100.0 36 .................................... TGGAACCCGGTCTGTGAGTACGTCGGCCCGAGGTTG 88829 36 100.0 36 .................................... CGGTGCGGTGGGCGATCATCTCGCGGGACTCGCCGG 88757 36 100.0 37 .................................... ACGGCCGGGTCCGCGTTGGTGGCGGCCGCCCAACCGG 88684 36 100.0 37 .................................... AAGTCCGTTCCGGGGCAGTTGATCAGGTTGGACTGGC 88611 36 100.0 37 .................................... GACTTCAGCCGGCGGCCCGTCAGCGGGTCCAGCTCGT 88538 36 100.0 35 .................................... CACGACTGACGGATGCGAATGGTCCGGGCCTGCAG 88467 36 100.0 37 .................................... GACTTCAGCCGGCGGCCCGTCAGCGGGTCCAGCTCGT 88394 36 100.0 35 .................................... ATGTAGTCGGCGATCTTCGGCACGGTGATCTCGTA 88323 36 100.0 36 .................................... CGTTCGCTCATCGGCTGGCCGCACTCGGGGCAGGGC 88251 36 100.0 37 .................................... ATCTGCGCGGCCTCGAGGTCGTCGCGGAGCGAGTCGA 88178 36 100.0 41 .................................... GCGCGCCGCTATCCGGTCGTGCCGCACTGATGAGTCATCCC 88101 36 100.0 38 .................................... ACTCGCGTCGGGTCGTGGCCGCCCAAGTGGCCCGGCCG 88027 36 100.0 36 .................................... AGGACCACCTGCTGCGCCTCCATGAGGACCGCTGTG 87955 36 100.0 36 .................................... ACGGTCGGCATGAGGTTGTGCGCGTCCCAGCAGCCG 87883 36 100.0 36 .................................... GGTGGGTAGCGGTGCGGGTCGCCCGAATGCAGCCTC 87811 36 97.2 36 .................................C.. CTCGACGGCGTCCGCTTCCCCATCGACTCCTGACCC 87739 36 100.0 35 .................................... ATGGAGCCGCGGATCAAGCGGCACGTGCAGGGCGT C [87725] 87667 36 100.0 37 .................................... CGCGCAGGAGGCCATCGGCGCCGTCATCAAGGCGGCC 87594 36 91.7 36 ............C........AA............. AAGCAGACCGTCAACAAGCTGGTCGAGCGACTGAAG 87522 35 77.8 0 .............C......T...-.GG..GC...G | ========== ====== ====== ====== ==================================== ========================================= ================== 35 36 98.3 37 GTCTTCCCGGTCTTCCTGACCGGGCTCCATTGCGGC # Left flank : ACCGACAGACCTCGACCAGCTGACACAACCGCTTCACCTCGAAGGCGTGCTGGTGGTCGGCGACGAACTGGAAGCGGTTCACCAGATCGTCTCCCCGGCGAAATATTTCGCCGCCTTCTGCAAGATCTCGCGCTCGGTGACCAGCTTGGTCTTCTCCGCCCGCAACGCCGCGTTCTCCGCCTCCAGACGAGCGATCCGCTCTTGCGCAGACTCGCCCTCCCTGCCGGCCTCCACCGGCACGGTCCGGGCCGCCAACGGGCTACGAGCAGGGCTACCATCAGCCGCGGTCTTCTTGCCCGTCCCGTACGCGGCCAGCCACTGACGCAGCGTGCCACGCACAATCCCCAGATCCGCCGCGATGCTACGCACCGTCGCGCCCGGAGTGGACTCGTACAAGTCGACGGCCTGACGACGAAACTCCTCAGAGTAATTCTTACGGGCCATGGTCCTGATCATCTCGCTTCCCCAGCCCAAGGCTGGAATCAGCGTGTCCAAGATTC # Right flank : ACGAACGCGCACGGGCCGCCGCTGCCTAGCCGTCGCCCGAGCGGCACTTCGCCCGTATTCGAGGCTTAAAACACAAGTGAACATCCGGGACCGGTGCACCGATGGACCCACCTTCAGGCGTAGGTCTCGACGGCGTGACGCGTCGACCCTCCAGGGAGAATCAACCCCCGGACCAAGCGCAGGCGGGTACACAAGGGGGTATACATGACAACGAGAATCGGCGCGAAGTGCCGCGAGACGGTGAAGAGCGTTTGCGCAGGTCACAGGCGGATCCGGTAGATCCTCGCAGGCCGAGAACGCCCTTGGCCCGCCCTCTCAAAGCGGCCGTGCGCTAGTAGGCGGCCGCCAGGGCGCCTCCCGGGTTAGAAGGTCCGGCTGGCCAGACTGATGGCGGACAGGATCTCGTAGGCGACGTGTGCGGCGGCGATGCCGGTGATCTGGACGTGGTCGTAGGCCGGCGCCACCTCGACGATGTCCGCGCCGACCAGGTTCAGGTCCGT # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCGGTCTTCCTGACCGGGCTCCATTGCGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-13.80,-13.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [21-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //