Array 1 30940-31757 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIWU01000009.1 Campylobacter curvus strain ATCC 35224 contig00009, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 30940 30 100.0 35 .............................. ATAAACGAAAATATATCGCGCATCATGAAAACATC 31005 30 100.0 36 .............................. CTCATGGAACGTAGCTGAAATATTATCCCCACCCTC 31071 30 100.0 36 .............................. CAAAGGATTTTTATCGATTATTTCATCTTGCAGCGC 31137 30 100.0 35 .............................. TCCACTCTCATTTTAAATGCAAGAGACTCTCATTT 31202 30 100.0 36 .............................. AAGCTTGCAAGCTTTCTTAAAAGCTTCATCGACTGC 31268 30 100.0 35 .............................. TACAACTATATTTTTACCATTTCTGACCGCTTCTT 31333 30 100.0 34 .............................. GCCAACCCGGTGAAAATTTCAATACTTTTACAGG 31397 30 100.0 35 .............................. CTAGCAATACGCCACTTTTGGGGCTTAGCCTAGTA 31462 30 100.0 33 .............................. CCGCCATAGCTCTTGGAGCTTTTTTGCAATGCG 31525 30 100.0 38 .............................. ATACATTTGACATAGGAGAATACAATGTTTCACATACG 31593 30 100.0 36 .............................. TATGAGCATCCTTGTCATCCTCTGCCTTATTGCCTA 31659 30 100.0 39 .............................. GAAAGATTGAAGCCAAAAATTTTTATTCAAAATTATACC 31728 30 96.7 0 .............................T | ========== ====== ====== ====== ============================== ======================================= ================== 13 30 99.7 36 GTTTCAAATTCCAAAGAAATGACCTTTAAC # Left flank : GCATATAAAATTTTGCTTGAAAAATATAACGTGAGCCAAAAAAGCGTGTTTGGATATTTTCATTTCGGTGCGTTTTTCGTGACCCTAGCAGCGCTTTTGGCGTTTGGGAATTTTGAGCGGATGAACCCGAGTGCCACGCAGATTTTGGTCTTGCTTTGGCTTGGTATCGTGGCTAGCGGACTTGGGTATTATCTATGGAACAAAGGCGCTTGCGAAGTCGATAGCGGTGTGCTTGCCATCATGAACAACGCGCTCATCCCGGCCGCTATTATCGTAAATTTAGTGATCTGGCACAAAGACGCGGATCTTTTGAGGTTGCTTATTGGCGGAGCGATAATGTATGTTTCGCTGATGGTGCATAAAAAAATCGTGAAAATTTATGAGAATAGGGCGGTAGCGTAGGCCGGAATTTATGATTTTTGTTGAAATTTGCCGAGGCAGAGTAGTGAGTATAGTCTTTGGTGTTAAGGAGCGTATATTGTGGGTTTTGTTGGTATCTG # Right flank : TAGCGTATAAAGATAAAAATATAGGCCTATTAAAAGTCAAGGCCTATGTTTTTACTCCTTAAATCAGCTAATGTTTAAAATATTTGACGATTAGAAAAGAGCCAATACGTATTATCAAAAGCTTAAAAAACACTTCGATCGTCTGAAATTTAGGGGGCGTATCCCCCTAAATCATTGTTTATAAAAGCCGCTTGGTTTGCCGGTCAGATCTATCATGATATTTTTCATCTGAGTGTAGTGCTCTAGGATGATCTTATGCGTCTCGCGGCCGATACCTGAGTTTTTATACCCGCCAAACGGGCTGCCTGCAGGGATTTGGTTGTATGTATTTATCCAAACGCGCCCGGTCTCCATCGAGCGAGCTACGCGTAGGGCTTTCGTGATATCTTGAGTGAAGATCCCGCCACCTAGGCCGTATTCGCTGTCGTTTACCATCTTTAAAAGCTCTTCTTCGTTTTTAAATTTGATGACGACGCCGACAGGGCCAAATATCTCCTCTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAAATTCCAAAGAAATGACCTTTAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 67871-68162 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIWU01000009.1 Campylobacter curvus strain ATCC 35224 contig00009, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 67871 30 100.0 37 .............................. CTAAAGATGAAGTTAGATCTATACTAAAAGAAGCAAA 67938 30 100.0 34 .............................. AATTCTTTGGCGGGATAATATGCAGGATCATAAA 68002 30 100.0 35 .............................. TACCCTGACAACTGCCGAAAACTTAAAACTGGCAG 68067 30 100.0 36 .............................. TCCTCAAGGTAGATTATGAATTCATCTACGCTGTTG 68133 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 100.0 38 GTTAAAATTTATTCCGTTGGAATTTGAAAC # Left flank : ATTGATTTTTAAATTTCAAAGCATAGGAATGCGAACATCATTCTAGCAAAAGCATTGCACGAGCCTATCGTTGTCGATTTTTCTGTTTTTACTTTATCTTACTCAAACGCTGTTCGCATTTTTCTCTTTTTAAGATGCTTCACACTACGCTCGCAACCGTACACGCAAGTAAAGTAAAAAGATTTCTTTTAAATGCCATTTGCATACGCGCCGCACTTTGAAGCGAGTATTAAGATTTGATTATAGCAGAGCATATTTTTTACAAAAAACCTGCTTGATTATCTTATGCACAGGCTTGAATGCTAGTTTAATGCTTTAATTATTAGGGCGTTTTATAACAAAGAGTTTGATAAAACGATAATAAAGCTTGTTCTAAGATTTTGATAATGCCCTATTTTCTAGGTTTTTGCTTGCTAAAAATTTTAAATTTTAACTATTTTTAAGATATAAAAATATAGACTTTTAATTTTAATGGCCCTGGAATTTGATATTTTGGTGCT # Right flank : CTATGCACGCACATAGCCTTGAACTCTGACGCTACTTTGAGTTTCGAATTCCAACGGAATAAATTTTAACAAATAAGGATACGGGCACAGGTATGGGGCTTTATATCGCTAAAATTTTAGCGGTAGAAAAGCTTGGAGGGAGATTTATGCTTGAAAGTAGGGCGGATCCTACTAAATTTGCGATCTTTTTAAAGCCTGAAGTCGGGAGCGGACGATGTATAACAAAATAAAAGAAATTTTAAAAGATGTGAGGCTGCTTATAGTCGAGGATGATGACGAGCTAAGGGCGACTTTAAAGGACTCGGTAGAAAAATACGTAAAGCAAATTTTTGAGTACTCAAATGCCAAAGACGCGCTGGCGTGTTTTAAACAAAACGATATAAATTTGATCCTCTCTGACATCAATATGCCGCGTATGAGCGAGCCTCAATGCCATCACTCATCAGGCAGGACGATAAAAATGTGCCGATCATCTTTCTGACAGCTTACGATAGCGACGA # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATTTATTCCGTTGGAATTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //