Array 1 74379-72099 **** Predicted by CRISPRDetect 2.4 *** >NZ_LKGM01000038.1 Lacticaseibacillus paracasei strain FAM7821 FAM7821_scaffold_0038, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 74378 36 100.0 30 .................................... ATTTTTGTTAGCACTAATGCTCCAGTAACA 74312 36 100.0 30 .................................... TGAAGGCAAGGTTGTTCTCGACAATGGGCG 74246 36 100.0 30 .................................... CTTTGCTGTGCGGCATCACATTCACTGTGC 74180 36 100.0 30 .................................... AGCGTGGCGTAGCGCTAACTTGTCATTTTT 74114 36 100.0 30 .................................... AAAAATTGGGGATTGGCAAGATTACGACTG 74048 36 100.0 30 .................................... TATTTCGCACTTCCAAAATCATAGCCATCA 73982 36 100.0 30 .................................... CGCCTGAACATTGCATCGATGGTTTGATCA 73916 36 100.0 30 .................................... GTTGGTGGCAGCGATTCATTGCTGACGTCC 73850 36 100.0 30 .................................... AAAGCGTTCGCTTTGATATATCAAAATTAG 73784 36 100.0 30 .................................... TCAAGATAGACCCCGTTAAATTGGGTGAAT 73718 36 100.0 30 .................................... AACAATTGAAGCGGTGGAAGCTATAGCCGC 73652 36 100.0 30 .................................... ACGTCGCCGCGAATTTTCCGCATTACCGTA 73586 36 100.0 30 .................................... TCGACAATTGTGACACGGGTTTCAACGTCA 73520 36 100.0 30 .................................... AACGGTGCTGCCAACTGGGTGCTCGCGCGC 73454 36 100.0 30 .................................... TTGAGTTCTGATTGTTAGTTGTATCTTGGT 73388 36 100.0 30 .................................... CTTCATCTAATGATGAATTAACTAACAAGT 73322 36 100.0 30 .................................... GCAATTTAATTTATAACCCAAGTTTATCAC 73256 36 100.0 30 .................................... GAGTTTTAAGGTGATCAGAATGTATCGAGA 73190 36 100.0 30 .................................... AATTCTTGACCCCATGATTGAGACGTATCT 73124 36 100.0 30 .................................... TTCGTTGATGAGATGATCGAGCATAAACAA 73058 36 100.0 30 .................................... CAATGCCGGGGGTCCAACCATAGCCTGTGT 72992 36 100.0 30 .................................... AACGGTGCTGCCAACTGGGTGCTCGCGCGC 72926 36 100.0 30 .................................... CTTCATCTAATGATGAATTAACTAACAAGT 72860 36 100.0 30 .................................... GCAATTTAATTTATAACCCAAGTTTATCAC 72794 36 100.0 30 .................................... AAGGTGAGCAAATCTTTGATGTTAGTCAGC 72728 36 100.0 30 .................................... ATCTCACTGATGTTATCGGCGATTTACGAG 72662 36 100.0 30 .................................... CATATTGACGTTGTGAACGTTGCATTTCTG 72596 36 100.0 30 .................................... CTTACGTCAACGGTTATACCGTGCGCAAGG 72530 36 100.0 30 .................................... AAGGGTTAGCGCCACTTAATCCTGACAACT 72464 36 97.2 30 ................................A... AAAGGCTTACGTTCAGGCGATTGAATCCGG 72398 36 100.0 30 .................................... ACCCAGTTTCCTCGTTGCGCAGATGTTTGT 72332 36 100.0 30 .................................... CCGAGAAGGTCGGACGATCAACTACTTTCG 72266 36 100.0 30 .................................... GAACGATTGCGCTTGACTACAAAACTGCAG 72200 36 100.0 30 .................................... AGGAAATTCGAGTTCTTCCCGCAATTGATG 72134 36 83.3 0 C.............C..............G..TTC. | ========== ====== ====== ====== ==================================== ============================== ================== 35 36 99.4 30 GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Left flank : AGCTTGATCTAGATAAACTTTTTCAACGTCTAATCTATAAGAGGATGGAGTTGTTGATTGAGAATCAGCGGCTTGTCGAACTGATCGATCAATCGCAACAAATGGCGATGTATTTACTTCAAGATCCATTTTTGAGCGACTTGCCAGTCACGGTTGAACCAGGTGGTAAGCTTGAACAAATCATGAAATACTGCAACGTTCATTTTGATGAGGCTGTCACGACAGAGTCAATCTCGAAGATTGAGGCGCTTATTCAGACGTTAACTAAATTGGAGGAAAAGAAACTTGTCATTCTTACAAATGTCAGTCATTATTTAAGTGCCAGAGATTTCTTTGCGGTGACTGAACAGATCGGCGATACAGAACTTCAGGTCATTCTCATCGAGTTCTCAAAAGTGAACCGAAAGAAATACTTTGAGAAATGCCAGTATATCTATATTGACGAGGACTTCGTTGATAGTCGTGAACTAGATTGATTAGGAGATTGTGTGAAAACAACG # Right flank : AAACAGCAGTGAGACTAAACTGAAGCTAAACTTGTCAAAAAGTGCCTCATTTTGTGACAAAATAAGGTGTTTCACTATTTATTGTGTGAACCAAGCCTCAATATTTACAAAGCTGAACCTTTCAACGTTCAGCTTAAAAGCCGCCGTCTAAAGCAATATCGTAGTAACCACATACACTCATGCGGTGATATATCAATCAAAAACTAAGTGCTATCTAACTCCTCTTGTGATAGAATTCATTATATATGAAATCGCTTACACAACGAGGAGGAAGAACGACATGAAAAAACTAATAGTGCTCAGCGCCACACTTTTGGTCAGCATGGGGTTGGCCGCATGTAGTAGTGGATCGAGCTCTAGTTCGAGCAAGAGCAGCAGCACGACTAGCCAGACGAGCAATGCTAAGGTGAAGATTAATACCGGCGCCGATGCGAGTGCCAAGGTGCCGGCAGCCGGCACCTTAGTGATGCGTCAGCTTTATGCTGCACCACACGGCAAGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //