Array 1 322924-324335 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHRIS010000001.1 Streptococcus equi subsp. zooepidemicus strain SEZ_19-058 tig00000001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ========================================= ================== 322924 26 100.0 41 .......................... CAATCTTACCGCCCTCTGCACAGCTCAGCTCATTGGTCTCG 322991 26 100.0 39 .......................... CCGCCAAGTCTGCAATTCTCGTCAATGCGACGTGTCTCG 323056 26 100.0 41 .......................... CTTTTACTACTCAGGAACTTTATCAAGAAGATAATGTCTCG 323123 26 100.0 40 .......................... TTCAAGACCACGTTTGGAATAAAGTTACAGTAAAGTCTCG 323189 26 100.0 40 .......................... TAGTCAGTCTCCGCTAAGGCAGGAGACAAGCCCAGTCTCG 323255 26 100.0 40 .......................... AATTTTAGCCCTGATAAAGTTAGCGTCTAAGCCGGTCTCG 323321 26 100.0 39 .......................... TTATTGATGAAAAAGTAGCTGATACAATCACAGGTCTCG 323386 26 100.0 40 .......................... TTATTGATGAAAAAGTAGCTGATACAATCACAGAGTCTCG 323452 26 100.0 40 .......................... CTTAGTCTCTTTAGACATATTTGCTGTTGATTTTGTCTCG 323518 26 100.0 39 .......................... TAGGTTATAATCAATAACTTTAAAAAGTTTGAAGTCTCG 323583 26 100.0 40 .......................... AGCAACGGGTTGTTAGGAGGCTGATCATGACTAAGTCTCG 323649 26 100.0 40 .......................... CTTGAGGTCTGGAAATTTTTTTAATTGACCTAAAGTCTCG 323715 26 100.0 40 .......................... TGTCATTAAAATCCGGTCTGACATCTATAATCCCGTCTCG 323781 26 100.0 39 .......................... TCTAGCTTTGTCTTTAGCATGATTTAAGGCTAGGTCTCG 323846 26 100.0 40 .......................... TACAGCCACAAGCACAAGTATTGGCTTATTGTCAGTCTCG 323912 26 100.0 41 .......................... ATATTTAACCCCCATTTTTCAAGATACTTTGACGGGTCTCG 323979 26 100.0 40 .......................... CAGTTTTGCAATGTTTTACAAAACCATACGACATGTCTCG 324045 26 100.0 41 .......................... CAGTGCTTTCGCCAAGTTGAGACATTGATAAATACGTCTCG 324112 26 100.0 41 .......................... TTAGGGATTGATAATATTGGTACTCATTCTATGAGGTCTCG 324179 26 100.0 40 .......................... TAAAATATCAGCGTACTCAGACATCACACGTCTCGTCTTG 324245 26 100.0 39 .......................... AAGAAGCCAGAGATCGTATTGTAAAAGACTATGGTCTCG 324310 26 100.0 0 .......................... | ========== ====== ====== ====== ========================== ========================================= ================== 22 26 100.0 40 CCCCATACGGGCGAGTGGATTGAAAT # Left flank : TATTCGAGGGGATATTGATAGCTACCCACCTTTTATGATTTAGGAGATTACTGATGATGGTATTGGTTACCTATGATGTGAATACAGAAACAGCATCAGGGCGAAAACGGCTACGTCAGGTAGCAAAATTGTGTGTTGATTATGGCCAGCGCGTGCAGCATTCGGTCTTCGAATGCTCGGTAACACCTGCTGAATTTGTTGAGATCAAGCATAAGCTGACGACGATTATTGATACGGAAGTGGATAGTATTCGTTTTTACTTGTTAGGAAAGCACTGGCAAAATCGTGTCGAGACGCTAGGGCGTTCTGATAGCTATGATCCTGATATAGGTGTCCTACTTCTGTAAAAGGAGTGAGTGCGAGCCTGAGTCACTCATAAAATGCTAGGAGACTCGCGCTAAAATAAGCTAAAAAATAAAGAAATGGGAGGTTATAGCTAAATATGTTATTAGCTAGCCTGTGTCATTTCTCTATAAACTGTGCTATACTGCGCAGTCTCG # Right flank : TTTTGCTGCTATACAAGGAGTGACACTGATTGAAGTCGCTCTCTTCTCGAGGGCGTGGTCCGTATCCCTGGTACTTTTCATGAAGGGATAAATCATATCACATTAATCAAGTTGATTTAAGCTTTTTATGGTACTATGTCAAATAGATAAAATCTCTGTGTCAAGTGTAGTGGGTGACTGATAACTAAGCACGAGAGGAGACGAAGGTCGTCTTCTCTTTTATGATGTTCAAAGCAAGGTAAATACTTTTCTTGAAGTTGTCAACGTTTCTGAATCCAAAAGCATTGTGCTTGATACCTTTGATAAATTTGTTAGTCGCTTCAAGCTTGGCGTTAGAATAAGGCAGTTCAATGGCATTGATGATATAGTCGTTATAGCGTATTAAGGTGTTCAAAGCTGTTTTGAAGGGGTGATTGAGATGAGGCATAACTCAAAGAAGAGCTCTGTATTCTTTTCTTGCAAATGAAAAAGAGGCAGCTGATAAAGGTCATAATAGCCTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCCATACGGGCGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CCCCATACGGGCGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.80,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //