Array 1 3080-3255 **** Predicted by CRISPRDetect 2.4 *** >NZ_QHHR01000002.1 Vibrio vulnificus strain 86573B contig02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ===================================== ================== 3080 35 100.0 37 ................................... CTAATACACCGCACCACTTCTTAAACTATCAACAAAG 3152 35 100.0 34 ................................... ACTGCAAGAGTCACCAATAGTTTTATAGGTTTCG 3221 35 91.4 0 .............................A.C..A | ========== ====== ====== ====== =================================== ===================================== ================== 3 35 97.1 36 GTTTCAGACATGCCCGGTTTAGACGGGATTAAGAC # Left flank : CCCAGTGGGGAGCAGGAATCTTTGCGTTCCGTATTGGGCAGCGTGCATGAGTTAGGGACGTTTTTTGGCCGTTTAGCCGATCATCGCAGCCTTGTACTCAGCGTCAGAGTTAATGTTTATCAGCTTTCGAACGAAGGCGGGCGAGGAGACACTTTAACCAGAGCGCCCATGCTCTACTTTGTTTTGCTCCCAACCGCCAAGGCGTTAGCCAACCAACCAACTCAACGGGAAGCCGCGCTGTACGCTTGGCAACAAGCACGTGTAATACTGGTGGGAAAACCTTAAATCACACACGTTTTCAGGCCTTTCCACTGGTTATGGCGTGAATAAACGCCAGATTTGAAGCACACCTTACTAAACAAAGTGTTAGCAAAGCATACTATCTTACCCAACAAAAAAACGCATAAGCCAGCAATAAAAATGAATGATTATATTTTTATAAAAATTTTGAAGCACAGCACGGTTACAGCCCTTGCCAGACAAGGGCTAGCAAAGGTAGA # Right flank : AGGGTTTGCGTTTGCAACGCAAACCAGCACCGTTTTCCTGGAGAAATCACTATGGCTATTCACCTTACGATTGAGGAATTGCAAACAAGCTGGAAGAAGGTCTCTGCCAATAAAGGCATTGCAGGGGTCGATGGCGTTACCATTCAAACATTTGCAATCCACTTGGATACCAACTTAAACACGTTACTCAGCGCATGGAACCACGGCAACTATGCGCCGTCACCCTATCGTCCACTCACCATTCAACCCAACGAAAAGAAAACCCGGCAGCTTGCCATCCCCACCGTTGCTGACCGGATTATTCATACCGCCATCGCACAAAAGTTGGTTGCCAAGTTTGAACCAGAGTTTGAACATATAAGCTACGGCTATCGACCGAATCGCTCCTACACCCATGCAATTCGTCATATCGAACAACTGCGAAATCAAGGCTACCTATACGTTCTTGATGCGGATATCAAAGGTTACTTCGACCATATCTGCCACAAGCGGCTCAAACA # Questionable array : NO Score: 5.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACATGCCCGGTTTAGACGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.80,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 6188-6849 **** Predicted by CRISPRDetect 2.4 *** >NZ_QHHR01000002.1 Vibrio vulnificus strain 86573B contig02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ===================================== ================== 6188 35 100.0 34 ................................... AAAACCACAAGGTTTTCGTAGCCGTTTTGTAGCC 6257 35 100.0 33 ................................... ATGCACCTTTTGCATTTAAGATGGTTTCCTGCT 6325 35 100.0 35 ................................... ATCAAAGGCTTTACCCTTGATGCATCCTTCAACAT 6395 35 100.0 35 ................................... TCTAGTAACCAACGACGCAACATGCTTCGAGCATT 6465 35 100.0 33 ................................... TCGTTATGCTGGTTGCTGTTCAGCTCTAATAAT 6533 35 100.0 35 ................................... ACCAGCCTCGCAGTAGCGATTCTTTAATCTGGTTG 6603 35 100.0 37 ................................... AACTCTTTATCATCCATGTAAACAGCAAATGCAGTTG 6675 35 100.0 33 ................................... TATGATCTGTACGATGACCTTGTCCAAAAACAT 6743 35 100.0 37 ................................... ACGTTTAGAAAACGAAATCTATTTTTGTTCACCTCAA 6815 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ===================================== ================== 10 35 100.0 35 GTTTCAGACATGCCCGGTTTAGACGGGATTAAGAC # Left flank : CTTTGATATCAGCGATGATAAACGGCGAAGGCGAGCGGTAAAACTGCTTCTTGGTTACGGGAATCGAACCCAATACAGTGTGTTTGAGTGTTTATTGAAGCGCTCACAGCTCAGGCAAATACAGCAAAAGATGCAAGCTGTGATTGAACCTTCCGACAGAGTGCTCTATTACCCACTTTGTGGAAAAGATGCTTTATGCCGCTACGCTGATGGGGCAGGCCAAGTCTATTGGCCTGATGCACTGTATTTGATTGACGAATAACTCATAGAGTAATACACCCTATATGACGAAATAACAGAGATAAAAACGACAATGTAACGTGAATAAAGAGAGATTTTGAAGCACGCCTTACTAAACAAAGTGTTGGCAAAGCATAATATCTTACCCAACAGGAAAATTCGCATAAACTTGCAACAAAAATGAATGATTATATTTTTATAAAAATTTTGAAGCACAGCACGGTTACAGCCCTTGCCAGACAAGGGCTAGCAAAGGTAGA # Right flank : CGCTAAAAACTTTAATCAAATTGGTAAACATTTCCAGTTTCAGACATGCCCGGTTTCTGCTTAGCAAAAGACGAAAAAAGGCGGTAAACCGCCCTTTTGCTTTGCCTTATGAGATTAACGAATCGATATTTGCTCCGCTTTCAGCCACAAACCATAGGGAGACTTCTGCTGCCCCCCAGTTGAATAAGGACGAATTTGATTTGGGTTGTCTTTATCAAACACTTGCGCTGGCATAATCAAATCGGCTAATTCTGGTACGAGCGCCTGACTCAATATCCGTTTCAGTTTGTTCAGTTTGTCACTGAAAAACTTCCCCGACATTCCTGCATTAAGCTCATGATAAGTGCGAGCAATGTCTTGGCGGCCACCACCTCGCATCGGAATATCCCGCTCTGTGAGTGCCGTCGCCCGCTGCTCATACTCCGCCATAAATCGACGTTTGTCGCCCTGTGCCAATTCGGTACTGTAGTCGCGAATGGGCAGCCCGGCGATGCGTTCCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACATGCCCGGTTTAGACGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.80,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA //