Array 1 310942-310194 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADZHO010000031.1 Shewanella algae strain CCUG-50501 50501_31, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
    310941	    28	 100.0	    32	............................	GCCCAGCATTCCGAATAGGGATTGGCTTTTTT	
    310881	    28	 100.0	    32	............................	TGCTGCACGTTCTCTGATGTTTTCTGCTCTAT	
    310821	    28	 100.0	    32	............................	TTGGTGGCGTAGCGGATATAGCCCAGCGTGGC	
    310761	    28	 100.0	    32	............................	ACTTATACTTCTTGGCTAAATCAAGAATCATC	
    310701	    28	 100.0	    32	............................	ACCAAGCCGTGATCGAGGTGTCGTTCTTTGAG	
    310641	    28	 100.0	    32	............................	ACAAGGGTGACGGGCATGCCGATCGGTACTTA	
    310581	    28	 100.0	    32	............................	GAAGAATGGAAATGTTGTCCCTGGATCATCAA	
    310521	    28	 100.0	    32	............................	GCCAGGGGCCGGGCTTCTCAGTTGGCCTGGCC	
    310461	    28	 100.0	    32	............................	TATGGATGCTGTAGCGCATATAGCAGCAGATA	
    310401	    28	 100.0	    32	............................	GATTACGACAGCCTGTTGTTTGATGATAACAA	
    310341	    28	 100.0	    32	............................	GACAATGACGAACTCGAACCACCAAGGCGCGC	
    310281	    28	  92.9	    32	.............T..A...........	AGCGAGGGATTTTAAATCCCTTTTTCAATACA	
    310221	    28	  92.9	     0	............T........G......	|                               	
==========	======	======	======	============================	================================	==================
        13	    28	  98.9	    32	GTTCACTGCCGCCCAGGCAGCTTAGAAA	                                	       

# Left flank :   CGAGTGATGTTTCCTACGTCAGCTTTGTACGCAAACAGGTGAAATCGCCTGAGCGGATTGAGCGGGCTATGCAGCAAAAGGCGGCATTATGGGCTGCAAAGTCGGGCAAGCCGCTGGCCGAGTGCTTAACCGATCTTGAAAAAAGCAAACCGACTGGGCAGTGTGATTTGCCATTTATCTTCTTGCACAGCCAGCAAACGAAACAACGTTCGCCGGACAAAAACAGCAAGTTCCCGCTGTTTATTGAAAGATATCCGCAAAGCACACCTGTGGATGGGCAGTTCGATTGCTACGGGCTAAGTCGTAAAGTTAATGGTATTGCATCGCTTGGAACAGTACCGCACTTTTAAGCATCAAAGGGTGAGTTTTACCCTTTATTTTTGCTCTTTAAAAATAAGCTTTATATACAATCAGTTACAACAGGTGGTATTCAACAGGGTAAAAATAGCTTTTTTATCCTAACCACCTGTTGTGACTTTCTTTTATTGATTTATTCTATT
# Right flank :  GGTTTTCTGGTGAATTACCCTTGAGCCTTGCCGTGCTCCCTCCACAACGGGGATTTATCACTCGGCCCCAGCAAAATCCGAACGTCCTGCATTTGTGGGGCTGAAGAGGCCGAAACTGAAGTGATCTGAATAGTGGCCCGGCTCAAGGCAGCATATCCACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCATCGCTGACCGATAACTGGAAGCGTCCTGCTCTGGGTGGGCGCCATTCCAGGGTTTGTCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGCGGCGTCGGCCTTGAGGGCTATGTGTTCATTGGCCACGCTTTGGCGCAGGCTGTAGGTGACGCCCTTCAAGGGAGAGCGGATAAGCGGGGCCGAGTCGCTAACCGCGACTCTTTGGCTGCAGGCGACCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAG

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGCCCAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGCCCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [4-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [48.3-75.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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