Array 1 6833-5304 **** Predicted by CRISPRDetect 2.4 *** >NZ_RZGS01000016.1 Legionella septentrionalis strain km711 contigs16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 6832 28 100.0 32 ............................ TTACTAAATTGTTTTAGTTTATCTTTCAAGTA 6772 28 100.0 32 ............................ AGTCTGTCTTCTTACGACAAAGGCACTAAAGA 6712 28 100.0 32 ............................ ATGGATATGGAGAGTTACGATATAAATATAAA 6652 28 100.0 32 ............................ CCACATTGGTCGCCTATCCTTTCTTGCAATTT 6592 28 100.0 32 ............................ AGAAGGAGCGGACTTTCTGCCTGCGTGCAAGC 6532 28 100.0 32 ............................ TCCCGATGTCTTCGATATGTTTCCACAGAGAA 6472 28 100.0 32 ............................ ATTTAGGCCAGTGAATACGAACGTGTCCTGGA 6412 28 100.0 32 ............................ CAGGTGTGATGGCTTGTGATAGAGCTGAAGAC 6352 28 100.0 32 ............................ GGTTTAATGGATTAAGTCCCCCCTCATTGGGT 6292 28 100.0 32 ............................ ATTGAGCAGCTAGTTTCCCCCCCACATAGTAA 6232 28 100.0 32 ............................ AGAGATAAGTACCTAAACATGACATCCCCCTG 6172 28 100.0 32 ............................ ATTGCCTGTTGAGAAAAGTTTGCTAAGTACAC 6112 28 100.0 32 ............................ TAAGAACATGGCATTACATTGTATATGTCCTA 6052 28 100.0 32 ............................ GTGATATTCTGGTCGATACGATTATTCCAAAA 5992 28 100.0 33 ............................ AGATGAAGATGACGACATCCCATACTAAGAGGT 5931 28 100.0 32 ............................ ATACAGCCCAACAGTCGGAAAAGCCGACACAG 5871 28 100.0 32 ............................ CAGTGCCGGAATCAAATGTTTTTAAATATCCA 5811 28 100.0 32 ............................ ATAGGGGTCGCATTATACTCACTAGCAGCTAA 5751 28 100.0 32 ............................ TCTTGATGTCCATAGACAAGATCGTTCAGCTC 5691 28 100.0 32 ............................ GAAAACGCTCCAGCAAATATCCAACTCACGCC 5631 28 100.0 32 ............................ AGTGATAGAGATTACGCCATTAATTGTCACTG 5571 28 100.0 32 ............................ GTCATTCATCTTATCAAATCTAGGCTTCCATC 5511 28 100.0 32 ............................ TTATGAAGACTGGGAAGTGCATGACTATTTAA 5451 28 100.0 32 ............................ CCTCGAAACATAGTTTCAATTGAAATCTTCTG 5391 28 100.0 32 ............................ GTCTGGATTTGTGCTTGATATGGTATTGCCGT 5331 28 78.6 0 .........A......A.A.T...A.C. | ========== ====== ====== ====== ============================ ================================= ================== 26 28 99.2 32 GTTCTCCGCCGTACAGGCGGCTTAGAAA # Left flank : TTGCTCTTGAAAACCTAATGCAAGCACACTGGATGAAAGGCATGAAGGATTATACGGTTATCAGTATGGTTCGACCTGTGCCCAGTAATGTTCAGTACCGTACAGTTTCGCGGGTGCATCAGAAAAAAAGCGCAGAGCAACTACGCAGGCGCTCAGTCAAAAAGGGCTGGCTCACTGAACAGGAAGCGCAACTCACCATTCATCAAAGAGAACCATTTAAAATTAACTTGCCTTTTTTATTATTAACGAGCCAATCCACCGGCCAAAATTTCAAGTTATTTATTCACCACAGTGACTTTAAGGAGGTCGCAGTAATAGGGAAATTTAACCAATATGGATTAAGCGCTCATGCAACTATTCCCTGGTTTTGACCCCTTTTTTTGCCCTGATATATAACATTCTGTTTTTTATATAATTTTATATTTCAATAAAATTAGGGTTAAATAACTTAATCTTATTTATCCTTTTGAAAATTAATTTTTTCTTTCTAAAATAAAACT # Right flank : TATTGGATATACTCATGTTTATGCGTCTGCTTAAACATGAGCGCCAGTGTGCTGAATTTTATTGCATTAGATAAGTTCTAAACAGGAGCAAAATTACTAGGATCGCTTATTGTTTACATCAGGATTTCAAATTGCTGCACGCTCTTTTTACATGAGATAATCGTAAGCTTTATCTTGCTTTTTCTTTATTCATCTCATAAAAGCTTTTCAATTCAAAATCGACGTAATTTTCAAGTAATTTTTTAATTTCGTATTCTGCACCGTTATAAGTTTCATATTCGGTGTGAAATTTTACAGGAGTGTAGGTTTTAGGGCCTCTATTTAACAGATAAGTTACAGAGCCATCGGCTTTGTAAAGATTTTTATCAACTTCAGTTGCCACGATTTTATAAGAAATTTTAAAGCCTTTATAAATATAATCGGTCACTTCGAACTCCCAGGGTTTAACTTCCCGCTTATGTTTAAGTATATACCGCTTAAAACTGAAATCTGCAATTATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCCGCCGTACAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACCGCCGCACAGGCGGCTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.20,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //