Array 1 280107-278822 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBMA010000001.1 Blautia luti strain MSK.11.25 NLDPBBPJ_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 280106 32 100.0 33 ................................ TTACCGAAAGAGGTGAATAAGCAATTACAGGAA 280041 32 100.0 34 ................................ AATCCCAAAATGGGGATATCATCATTTTGACGAC 279975 32 100.0 35 ................................ ATTCACGCTTAATGCGAACCCCAAAGTTGGAGACA 279908 32 100.0 33 ................................ GTCTGCTTTGTTTCCTGTTTGGTAAGGAGTTTC 279843 32 100.0 34 ................................ AATGGAGGAAGAGACAGATGACAATCAGAGAAAT 279777 32 100.0 30 ................................ CTCTTTCTCCCTGATTCTCTGAATAAGTGT 279715 32 100.0 34 ................................ ATGATTCTTATGTAAGAGACCGCAGACGGTGGTA 279649 32 100.0 34 ................................ TCCCTCATACAAAAAGCGTCCATAAGGAGCAGCC 279583 32 100.0 34 ................................ ATACCGGGCAAGAAACATCCAATAACTTAGGCAT 279517 32 100.0 35 ................................ ACAAATACGGCACTGCAAAAGATAATTTCGGAGAG 279450 32 100.0 35 ................................ ATCAGATGTATAATTGAGCTATCAATCCAAGGGAG 279383 32 100.0 33 ................................ AAGTAAACCATGTCCCCTACTTTTGGTTCAAAA 279318 32 100.0 36 ................................ GGCTACTGGAAGCTCCATGGCTATTCGAGAGTTATC 279250 32 100.0 34 ................................ AATGTATAACCTTAATAGTAAGGATTGAACACTT 279184 32 100.0 34 ................................ ACAATGCCGTACACTCTTTTCTCGCTTCCGATCA 279118 32 100.0 34 ................................ GCTCACCTCCTGAAGGTCCTCGCACAGGTCTATA 279052 32 100.0 35 ................................ ACTGTATAAGCCGCCTGTGCCCTTGTGGCCAGCCT 278985 32 100.0 33 ................................ ATGTCCGAAGACAGAAAACTACACGGAGACACC 278920 32 100.0 35 ................................ AGGTATACAGCTTGTGAGCTATAAGCAATATAATC 278853 32 93.8 0 ........................A.....G. | ========== ====== ====== ====== ================================ ==================================== ================== 20 32 99.7 34 GTCAGCCTCTTCGTGAGGCTGTGAGTTGAAAT # Left flank : TGGATGAATATCCGCCATTTTTCTGGAAGTAGGTGAGATAATGCTGGTTTTGATAACATATGATGTGAATACACAAACGGCAGCAGGAAGAAAACGTCTGCGTAAAGTTGCGAAAGAGTGTACCAATTATGGACGGAGAGTGCAGAATTCAGTATTTGAGTGTCAGATGGATGCAACAAAATGCAGACAGGTGAAGAATATTCTGGAGAATATTATAGATAAAGACGTGGACAGCCTGAGATTTTATTATCTGGGTGAAAAGTACAAAAATAAAGTAGAACACATTGGTGCAAAGCCTGGATTTGATGTTACAGATACTTTAATATTATAGTGCGAAAGGTAAGCTTACAGAAATACTTCAGGACATTCGCACCAGAAAATGTGTGTATTTTACCAGAAAAAAATCTACAATATAATAATTTGAATAAAAAAACAAGATTGGTATGTGCAATAAGCATAAAAAACAATTTTAGATAAATGTATTTTTGTCTAAAATTGCT # Right flank : GTATTTGTGCTTGTTGAAATTTTATGTCTGTTAGTATTAATGATTTTTTCTAAAATATATAAAAGAAGAGTATGGAAACTTGAGTGATATATGAAGGAGTAATTAGCTCTGCAAAGTATCGGTGAACTGACAGAATGGGATTTTGGTCAGTATACACCGCAGGTTGTTGTCGTGGCAATTGGCCAGAATGATAATCATCCGTTTGATTACATGTCAGAAGATTACATGTGTGAGAAAGCAGTTCTCTGGAGAGAACACTACACAAACCTTTTAAAAAATCTGCGTCAGGTATATCCGAAAGCATCAATCGTCTGCTGTACGACATTGCTTGAACATGACTGTTCCTGGGATAAAGCAATTGACGATGTAGTTGTTTCTATGGGAGATAATAAAATTTCTCATTGCATCTTTAAGAGAAACGGAGCAGCAACTCCAGGACATCTCAGAATTCCGGAGCCCTATGAGATGGCGAGAGAACTTGCTGATTACATAGAGAATCT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGCCTCTTCGTGAGGCTGTGAGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.70,-4.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 1 39531-38160 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBMA010000017.1 Blautia luti strain MSK.11.25 NLDPBBPJ_17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================================= ================== 39530 30 100.0 34 .............................. ATTCTTTATGCGGGGGTGTGAGTATGAAATGCAG 39466 30 100.0 36 .............................. TATTAACTATATAGCTCTGGTGGCAGCGCAAAAATC 39400 30 100.0 36 .............................. GAAGAATTTCTGAGAGAGTATGTTAAATGCGATCTA 39334 30 100.0 37 .............................. TAGGTAGAAAGTTGCGATAAGACACGCACACGGAACG 39267 30 100.0 37 .............................. AAACTATCGGAAAAAATGTTGCAGGATTTTATAACAC 39200 30 100.0 37 .............................. ATGTAAGTAACTGACACGCTATTGTGCAGTCCTCCAT 39133 30 100.0 35 .............................. ATCTCGAAAAAAGATAGAGTTTATTCCTATTGGTT 39068 30 100.0 35 .............................. ACTTATTCATTTTCACATTGTATTTCTTACAATAT 39003 30 100.0 37 .............................. TATGAAAAATTAAAATGGTATGCATTAGGTGATAGTT 38936 30 100.0 36 .............................. AACGTGAACAGCAGGAACTTCTTGAAGCGTTTGAAG 38870 30 100.0 36 .............................. CTGTGATTAATGCAAGTAACGCATTCAGAGAAAAAC 38804 30 100.0 38 .............................. ACGGCTAAATTACCTAAGAGATTTTGAGCCGCCGCTTT 38736 30 100.0 38 .............................. ACTCGTTACAAAATTTATAAATTCTATTTGGATCTCTC 38668 30 100.0 37 .............................. ATTCTTTCAGTATATAGATCATGATAATGCGCAAGTC 38601 30 100.0 36 .............................. TGATTCTGTCATTCCCGACAAGTAACGCTGTCTGTG 38535 30 100.0 36 .............................. AAAGATGATTATACACCGCTTGCACTCGAGCTTACA 38469 30 100.0 35 .............................. TCTTTATTTTCCTTTAAATATTTGAATTCATCTTT 38404 30 100.0 36 .............................. TTGCCAGATACACTCTTGCAGTAGAAAGACAGTATC 38338 30 100.0 40 .............................. ATAAGATGGGTTAGGGACTTGGCCTTTCTCAAATTGTATT 38268 30 86.7 49 A...........G...A............G AAACGAGTTTTCAGAAAATACAAGGGAAGTAAACGACCAATATTCCTGA 38189 30 70.0 0 ..........CTCT...C.....CAA...A | ========== ====== ====== ====== ============================== ================================================= ================== 21 30 97.9 37 GTATTAATAGAAACATTGTGGAATGTAAAT # Left flank : TGGTGAAAAGGAATATGAAGGATTCAGGATATGGTGGTGAGTTATGTATGTAGTTTTGGTTTATGATGTAAGTCAGCAGGAAAATGGTGCAAAGCGTTGGTCGAAGATTTTTAAGATTTGCAAAAGGTATTTGACACATATCCAGAATTCTGTTTTTGAAGGTGAGATTTCCAAGGCGCAACTGGCACAGCTACAGCAGGAGTTAAAGTTGTATATTGATAAAGAACTGGATTCGGTGATTATCTTCAAGTCGCGGCAGGAGAAGTGGTTGGATAAGGAATTCTGGGGGAGGAGAGATGATTCGACAAGTTTTATTTTATGACTGTCGACCTACGATAAGGAGAAAATTCCGGGAGGTCGACAAAGTGGGTGTTTTGCTGGGAAAATGTGGGATTTTTAGATTCTCAAGGAAATTTAATTAAATCCCGAAATAATAAAATGACAGGTTCGACAGAAAGTGGTAAGATTAAGCATGTAATATAAGCAGTTGTGAGGGATGG # Right flank : TCCCCTCAGCACTTGGCATTCTCTGCCAGCACCTGAGAGGATAAATAATATTTTTGAAGACCTTTTAATTATTCCGTACCAACTCCATAATCCTATCCGTAGCACAGCCATCACACGCGGACATAAATTTCTCTCTAAAGGCATGAACCTGTTCCTTATCGAACCGTGTGTCAAGATTCTGAATGTAATCAATGATCTCCTCAGTTTCAGTTACGACAGGGCCGGGGGTGAGGTCATCGTAGTTGTAGTAGAAACCTCTCCAGTCGAAGTAATCTTCCAGGTCGTAGGCGTAGAAGATCATTGGGCGTTCGAAAAGGGAGTATTCGAAGATCAGGGATGAGTAGTCGGAGATGCAGATATCGCTGACGCAGAGCAGTTTATCGATATCCAGATCTGTTGTTACATCCATTGCGAAATCTTTGCAGTCCTCGGGAATTTCCGGGCGTTTTTTTACGAACGGGTGGTGTTTCAGGAGAAGAATGTATTCATTTCCAAGGGCT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATAGAAACATTGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 48960-48470 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJBMA010000017.1 Blautia luti strain MSK.11.25 NLDPBBPJ_17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ========================================= ================== 48959 28 100.0 37 ............................ ACATTTACGATCAGTATCTTTTAATGGTTTGTTTTGG 48894 28 100.0 37 ............................ TTTGCAAGAGCTTCTGCAAGCACCTGGCGCACGTAGG 48829 28 100.0 39 ............................ TAATATTTTTTTGAATATTTATTAAGATTTTGAGTAGGG 48762 28 100.0 37 ............................ TCACACAGGCCGCTATTGATTCCGTCAAGCTTGCTGT 48697 28 100.0 39 ............................ GTGGATAATAATGTCTCAAATATCCGCAGGCGAATCCGT 48630 28 100.0 37 ............................ GCGCATAGAGCCTCATCTGTGAATTGCCCTCAGCAGT 48565 28 100.0 41 ............................ AGCGGAGAAGGTTTGGGCAATTCAGAACGTGCCGAGTGGTT 48496 27 71.4 0 ...TT...G..T-........AC.G... | ========== ====== ====== ====== ============================ ========================================= ================== 8 28 96.4 38 ATTAATAGAAACATTATGGAATGTAAAG # Left flank : GGAAACCGACTGCCCGTACATGGCACCTGTACCGAACCGTGGAAAGAGAAATAGTTCTCTGTATTTGCCGGAGGTTGTGAAGACCATTGCGGAGATTAAGGGAGTCAGCTGCGAGGAAGTTGTGGCTGTGACGGAGAGTAATGCGGTGAAGATGTTGGGGTTGATCAAATAAATCGCAGAGATGTTATGTGGTTAAATACGAGTAGTGAATGTCCGTTTGATTTTGAAAATATGAAATAAAGAATATTGAAATATCATTCATTATAATATACAGGAAGTTCTGGATGTGAAGAGAAGATTCGAACAATTTTATCTTATGATTGTCGACTTGCGATATGGAAAAAATTCAGAAAGGTTGACAAAGCATTTATTTATAAGGAAAATTGAAGCATTATGTTTGAATAGAGCTGAAAATTTATGTATAAATAATTGCAAATGACGAGCTCGACAGAAAGTGATAAAATAGACCTTATATTATAGGTAGATGCAGAGTGCGGGGG # Right flank : AAGGTAGTAGAGTATGTGCTTCTGAACTGGATTTTGCTTGAAACCAATTGCCCATACAAGGTACTTGTGTAAACTGTGAAAAAATAAGTTACTGTATTTACCGGAGAGTGATGTGGTGAAGATGTTGGAATTGATATGATACAGAAATGAGAAAAACCAGTTAATCTGAAATTTGCATTTCAGATTGGCTGGTTTTTCCTGATCCAATATGGAACTATTAAAATGTATTAGACTTCAAATCATTAATAATCTAATTTTACATTACAAAATGTAGCGATAACATTATATATTATAATAGATAAACTTGTAAAAATAAATAGTGAATTAATAACACCCCATTAGAATATTATTGATTTATAAAAAGAAATGTGATATTGTAAAAGAAACAACAATTTATTGATCGCTTCCAGAAAGGAGGAACAAAATGAACGAGTTAAAACTGGAATTTCAGTTAGAAACAACTAAGATTCCGGCTGAACTGGACAAGGTTTTAGTGAGTT # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAATAGAAACATTATGGAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:78.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //