Array 1 189019-192170 **** Predicted by CRISPRDetect 2.4 *** >NZ_FBXI01000109.1 Acinetobacter baumannii strain D13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 189019 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 189079 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 189139 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 189199 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 189259 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 189319 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 189379 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 189439 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 189499 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 189559 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 189619 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 189679 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 189739 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 189799 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 189859 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 189919 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 189979 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 190039 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 190099 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 190159 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 190219 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 190279 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 190339 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 190399 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 190459 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 190519 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 190579 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 190639 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 190699 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 190759 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 190819 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 190879 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 190939 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 190999 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 191059 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 191119 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 191180 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 191240 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 191300 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 191360 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 191420 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 191480 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 191540 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 191600 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 191661 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 191721 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 191781 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 191841 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 191901 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 191961 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 192021 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 192081 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 192141 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //