Array 1 311531-310717 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBEK010000004.1 Clostridium botulinum strain DFPST0018 4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 311530 30 100.0 36 .............................. CAAGTTGTTCCTCTCTCATCTCTCCAAATTCCTATA 311464 30 100.0 36 .............................. AATAATCATAAGTTAAAATACTTGATAATAATTTTA 311398 30 100.0 36 .............................. TAAGGTCGAAGTGGGAACTTTTATTAATGATAAATT 311332 30 100.0 35 .............................. TCTATCTGTTTAAAGCTACACCTAGAATTAAAATA 311267 30 100.0 35 .............................. TGTGTTTATAGAGTGCAATTATTCGGAAGATGTGT 311202 30 100.0 34 .............................. AAAAAAATAGATTTGTTAAAGAATTTTTTGTATA 311138 30 100.0 34 .............................. ACCATAATAGTTACTTTTCTACTATCTAATAAAT 311074 30 100.0 36 .............................. TCTGTTAACACATTTGTATAAAACTTTACAATATCT 311008 30 100.0 36 .............................. TATTAAAATAACCATCAACTAATTTTTCATATTGTT 310942 30 100.0 36 .............................. CTGCAAAATATTTAAACAAAGATGATACTACATATA 310876 30 100.0 34 .............................. AATCTTTTCCAAACTCTTGCATTAGCTGTTATAT 310812 30 100.0 35 .............................. AGAGCAATTCCTAAATGTTTAGGTCTTAGTATACT 310747 30 86.7 0 .......T.........T.....G.....G | G [310719] ========== ====== ====== ====== ============================== ==================================== ================== 13 30 99.0 35 GTTTAACCTTAACATGAGATGTATTTAAAT # Left flank : AAGGCAGAGAAGAAGGAGAAAAAATTAAGGCGCTAGAAATAGCAAAAAATTTACTAGATATCTTAGATAATAAAACAATAGCAATAAAAACTGGATTAACAGAAGAAGAAATAGATGCTCTTAGAAAAAAAGAAGTTAATTAGTGTTTTTTAAAAACATTTAAGATTTAGTTATCCTTGACAAAGTATCCCATTTAAAGAGTTATAATGATTTTTTTAATTGTTATAGCTCTTTATTTTTCTCCGAAAAATAAAGAGATTAAGCTCAAATTTACTTTAAGAATTGTAAAAATAAAGTAAGTTAGCTATAATATTAAGCATTCTATTTTACCAGCCATAAATTTATATAAAATCCCTTAATCCATTGAAATTACAGCGCTAAAGTGACCTTTTAAAAATTTTCTGAAAATTTTATAAATGGCTGGGAAAGTTTCATTGAAACCTTGAAGTTTCAATGCCTTAATGGTATTATTGATTTTAGAGAATGAGGATTTTACTATG # Right flank : AAAAGGGCATGCTAATAACTAATAGAATGGCTGCAATGATTGGTTCATTGCAAGAATAAATATTAAAATGTATTATTGAAATTGTTTATATATAATGGGGGAAAAAAATGACTGAAATGCAAATGTGGAATGAATATATTAAAATTAATACTAATGCAAAAGAGTATCAATCATGGTCATTTGGTGGAAATACACCTAAAATGCCAAATTTGTTGGCTGAATTAGTATTAAAGGGGATTAAAACTGCAACTGCTAGTGCATATCCTTGTTATATTTCAGAAAATGCTCCATTACCACCAGTTGGAGGATATAATTTGATATTAAATACAAAAGGTGAGGCTATTTGTATAATAGAAACTACAAAAGTATATACAATACCATTTAACCAAGTTAAGGAGGATCATGCGTATAAAGAAGGTGAATTTGATCGTACGCTTATATCTTGGAGAAAATGTCATTCTAAATTTTTTTCTATGGAATTAAAAGAGATTGGTCAAGAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 316037-315226 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBEK010000004.1 Clostridium botulinum strain DFPST0018 4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 316036 30 100.0 36 .............................. TTCTTTCTTCCTCCTCTTTTGAAATTGATTATTTAT 315970 30 100.0 34 .............................. CTTTCTTTATCAGTAAAATCGTCATTTACTCCTA 315906 30 100.0 36 .............................. ACAATACTACTAAATTCTAGTTCTGTAAGTCCTATA 315840 30 100.0 35 .............................. TTAAAATTATACTTTTAAGTTCTTTTTTAGAGATA 315775 30 100.0 34 .............................. ATCCTTTGTAGAGTTCTAACTAATAAATCTGCTT 315711 30 100.0 36 .............................. CTTTCAAAATGACCATCATACAGACTAAGACTAGCA 315645 30 100.0 36 .............................. AAATGATAGATTAATAGATAGGCAAATTAGGTGCAA 315579 30 100.0 35 .............................. TAAAGAGCTATTCCAACTCCCTCTAATGCAGATTT 315514 30 100.0 36 .............................. ATTTCATACCCTCCTAATTTTCTTTAAAATGTGTTA 315448 30 100.0 34 .............................. CAAATAAATTCAGCAATAGTGTATTACCAAAGGG 315384 30 100.0 35 .............................. TATTTAGGAGATTTAGAAACTGGTCGTCTAAAAGG 315319 30 96.7 34 ................A............. AAAGATACATTTTTAAGATAATTCTTTATATTGC 315255 30 96.7 0 ................A............. | ========== ====== ====== ====== ============================== ==================================== ================== 13 30 99.5 35 GATTAACCTTAACATGGGATGTATTTAAAT # Left flank : GTCGGTAGAGCACATGACTTTTAATCATGGTGTCCCGGGTTCGATTCCCGGGTGAGCCACCAAAATATTGTCCAAAGTAGAAATGTGAGTTTTTACTTTGGATTTTTTTTATTTTAGAAGAATAAAATAAAATACAATATTGATTAGATATTTTAGATAATAAAACAATAGCAATAAAAATGGGATTAACAGAAGAAATAGATGCTCTTAGAAAAAAGAAGGTAATTAGTATTTTTTAGAAACACTTAGAATTTAATTATCTTAGTTTTTTTTCTGTACAATTCTATTAAAGTGTATAATTTAACTAGAATAGTAAATATTCTATTTTACCAGCCATAAATTTATATAAAATCCCTTAATCCATTGAAATTACTGGGCTAAGGTTGCCATTGAAAATTTTTATTGAAATTTCACAAACAGTTGGTAAAGTTTCCTTGAAACCTTGAAGTTTCAATGCCTTAGTGGTATTATTGATTTAAGAGAATGGCTATTTTACTGTG # Right flank : AGAGCATTAGATAGTATTTTTATTGCCTTTGGAGAAGGCTTAACATTAAAACATCCTTATAGCTATAACTTAGTTTTGTAGCTATAAGGATGTTTTTTTACTCTTAATAATGTAACAAAATATGTTATACTTGAAAAAAACAAATTGTAATTTGCATGGGAGAATACAAAAATGAGCAAATTGACTAAATATATTGAAGATTTAAGAAAAAAGTATGGGGATGCAATAGTAACAAAAGAAAGTCATTATGATGATATGATGCTTTTAAAGGTACCTGAGCCATTGAGGGAATTTTATAGGGAATATGAAAGTTTAGAAATGCCTTTTGGAATTATTGACTCTATCGAAATCAGTATAAGATCTTCAGAAGCAGAACCCTTTAAAAGTGAAGGCTGGTTTTCATTTGGTGCAGATAGATATTTTTCCTTCTGGCTATGTGCTTATAAGGAAGATAATTATGGTAATTCCATTATTTCATGGGATCACGATATAGATGATGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACCTTAACATGGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //