Array 1 27433-27766 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJZJ01000032.1 Chimaeribacter arupi strain 2016-Iso2 NODE_32_length_54995_cov_26.8361_ID_6639, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 27433 29 100.0 32 ............................. TGTTCAGCTGATCAGGGTCGAGCCCTGCACTG 27494 29 100.0 32 ............................. CCTTTCACATTAAAAGAGTTGGTTGCAGACTA 27555 29 100.0 32 ............................. GCGCAGTCCACGATTTGCTGTGCGACCTCATC 27616 29 96.6 32 .....T....................... CGCTGGTTTGTCGATGACGTAGAGCGGATAGA 27677 29 100.0 32 ............................. CGCGCGGCTCATCGGCAAAGGCGCGGCTTGGC 27738 29 82.8 0 .....................A..T.GAC | ========== ====== ====== ====== ============================= ================================ ================== 6 29 96.6 32 GTGTTCCCCGCGAGAGCGGGGCTAAACCG # Left flank : CAGCGTTCCGGCGGTGATCGCCGTGAGCCGTGAGCCGCTGATTGTCTACTCCGCGATGATGTTCGCCATCCTCGGCCTGCGCGCGCTCTACTTTGTGCTGGAAGCGCTGCGCCGCTATCTGTCGCACCTGGAGAAAGCGGTAGTGGTGTTGCTGTTCTTTATCGCCTTCAAACTCGGCCTGAACGCCAGCGACCACCTCTGGCACCACGGTTACGAGATCGGCATCAACACCAGCCTCTATATCGTGCTGATTGTGCTGGGCCTCGGCATCCTCGCCAGCGTGCTGTTCCCTGCCAAAGAGAAGTAATTCTCTCAGCAATCCTGAAAAACCCCGGCTTGCCGGGGTTTTTCTTTTTCCGGCTGGTGAATACCATAAAACGCATTCTGAATTTTATAACGTTCTGAAGAATCAATGATTTATATCGCATAATCATCGTAAAAAAATCGGTAGAATTTTAGCTGTTTAAAAAAGTTTTTATAATCAAAGAAATACGATAAGA # Right flank : CTATGACTGATCCTGTAATATTGTAGTAATCCAATATGAGAACGCTGTCTAAACGTCTGATATACACATTATATAATGTGACTATTATTTTAATTCAATGTTATTGATTTAATCATTCCCTGTTTTATTTATTTTTCATGACTATGTTTATCCCCATGTTTATTGATTTTTAGTATTTGTTATTGGCTTTTATCAGGCGCAAACTATGCAAGCTTTTCTAATCAATTAGGAGTTTAATAATGGCTATCCCTCCCTATTTATGGTTAAAAGATGATGGTGGTGCACTGATTAAAGGGTTGGTTGACGTGCGTGGCCGGGAAAACAGTATTGAAGTGCTAAGCTTTATGCATGGAGTGGACATTCCTACCGATGGGCACACAGGTCAAATAACCGGGCCGCGAATTCATGATGCATTAGAATTTGAAAAAGAAATTGATAGTTCAAGCCCATTGCTTTATAAAGCATCAACCACCGGTCAAACACTAAAAAGTGCTGAGTTT # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGAGAGCGGGGCTAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGAGAGCGGGGATAAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.90,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 25787-23959 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJZJ01000034.1 Chimaeribacter arupi strain 2016-Iso2 NODE_34_length_48107_cov_28.8695_ID_6643, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 25786 28 100.0 32 ............................ GGTCTAGTGCGGCCTGCTCGGCTGGCGTGATT 25726 28 100.0 32 ............................ TTTGGAAAGCGCAAACTCGGCTACTACGTTTA 25666 28 100.0 32 ............................ ATGAATGATCGGAATTCGTCACCTCCGAACCG 25606 28 100.0 32 ............................ CAGCTGTTGTGCGTAGAAATAAGCCCCGTTGC 25546 28 100.0 32 ............................ ACCATGCACTCCAGCAGCCCCAAAATGGCAAT 25486 28 100.0 32 ............................ GTGTCGAACGGGACGCCGTGCTGTATCGCCAC 25426 28 96.4 32 ........T................... TGTCCATGCCCGATCACGTGGTGCGGGTCGTC 25366 28 100.0 32 ............................ AGCACCACTATTGATAGCCAGATACAGGCCGC 25306 28 92.9 32 ...........TG............... TCGCGTTTTGGGTAGGCGCGCCAGAGCGCTTC 25246 28 92.9 32 ...........TG............... GCGATAGGGCGGGGCGAAAAGACGTGGCATTT 25186 28 92.9 32 ...........TG............... TGACCCACCTGTTCTGGTGACTGACCTGGTGC 25126 28 92.9 32 ...........TG............... TTCTTAGCTCCAGCAAGCGCCTCTTTCCACGA 25066 28 92.9 32 ...........TG............... TATCTGACGTCATTCGCGAGGGGAAGGGATTT 25006 28 92.9 32 ...........TG............... CACAGCGCCCACGCCACCGGCCAGCGACAGCA 24946 28 92.9 33 ...........TG............... AGTCCGCAATTTGCGTCAGCAGCGCCATGTCAC 24885 28 92.9 32 ...........TG............... TCGGAAGAAGTACGGGCGGCACGTATAGCAGC 24825 28 92.9 32 ...........TG............... TCCAGCCGCCACTCCAGCTCCTGCGCCGAGAA 24765 28 100.0 32 ............................ TGTCAACAATTCGAAAATCATCAGCAAACCAT 24705 28 100.0 32 ............................ CGACCGACCTAGCGCAAATCGCTATCCGTCTG 24645 28 100.0 32 ............................ GCTGCACCGGCCCCGATCAGCGGGCCGCCCCT 24585 28 100.0 32 ............................ CGAGCCTCGTGCAGCTCGTCCCCCTCGCCCCG 24525 28 100.0 32 ............................ GTTACGGCCCGCGACCGTTTCGGCCTAGTTAC 24465 28 100.0 32 ............................ AGGAGGAGGCCGCCCGGATCCAGTCTGCCGCC 24405 28 100.0 32 ............................ AACAGGAACGGTTAAAGCGTAGTACGCACGAA 24345 28 100.0 32 ............................ AGCACGTGGATCAACGCCCGGGCAGACTCCGG 24285 28 100.0 32 ............................ CGACGACTCAGGCGGCTACGGCTTCAACCACC 24225 28 100.0 32 ............................ GATCCATTGACTACAGCGCTGGCAAAAAATCA 24165 28 100.0 32 ............................ AACGAACAACCCCCTCTACCACTTCTGCCAGA 24105 28 100.0 32 ............................ AGTTCATCTGGCAACAGGTCTGCGTTATCAAT 24045 28 100.0 32 ............................ TTGTACTGGCCGGTGACTTGCGAACCGCGTTC 23985 27 92.9 0 ...........T............-... | ========== ====== ====== ====== ============================ ================================= ================== 31 28 97.6 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGCATTGCATACGCTGGAGTCTTTGCACTGGCGTACCGGCCTTAGCGATTACTGCGCTGTTTCAGCGATCACACAGGTCAGCGGGATCAAAGGGTGGCGCACAGTAAGCCGGGTGCAGGTGAAAAGCAGTGCCGGGCGCTTATTGCGGCGCTCAGTGAAGAAAGGCTGGATCAGTGAAGCAGAAGCGGTACAGCGGCTTGAAAATAGTCAGGAACAGCGAAGCGACTTGCCCTGGCTGGCAGTAAAAAGCCTTTCCAGCGGTCACCACTTCCGGCTGTTTATCCGCCACGGTGAACTTCAGCCCGCCGCCAACGCAGGGGAGTTTAGCTGTTACGGCCTGAGCAACACCGCCACCATTCCCTGGTTCTGACCCTTTTATTTCCGTCAAGGATAAGTTGTTGATTTATTGAGACCTAAATATGAGGTAAGAAAAAAGGGGTAAGGAAGAAAATTAAAAGGATTTTTACGCAATAACAAAACGTTACGAAGCTGGCTGGTCA # Right flank : GGCTGGAGACAGTTTGATGAAGAGTCCGGACGCAGAAAAGCAAAAACCCAGCCATTGGCTGGGTTTTCTGAATAAGTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTATTGGCTGAAGGCCGTCAACGGCTTTATGCAGAATTCTCCCTGAAACCGGGCTGACTGCTCTCTTTTCAGACAAAAAGCCACAGGGCAGCAGCAAAAACTGCCCCTGACAGGCGATGTTTATCAGGTCAGCGCACCATGTTTACGGCAGCGTGCGACCTGCAAAACATCCTCAGCCAGCCGTAATGCGACTTCCACATCATGGGGCTGCCGTTTTACCAGCAATTTGCTCAGGCACCCTTCCAGAATCAGCTCCATCTGCTCGGCCACCATCGGCGCATCGTCTGCGTCCATGTCCTGCAACAGCGCCAGCGTATAGTCATAAGAGGC # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //